Sinocyclocheilus grahami (golden-line barbel): 107551907
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Entry
107551907 CDS
T04918
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2B-like isoform X1
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04020
Calcium signaling pathway
sgh04080
Neuroactive ligand-receptor interaction
sgh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
107551907
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107551907
04082 Neuroactive ligand signaling
107551907
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sgh04040
]
107551907
Ion channels [BR:
sgh04040
]
Ligand-gated channels
Glutamate (ionotropic)
107551907
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
107551907
NCBI-ProteinID:
XP_016089167
LinkDB
All DBs
Position
Unknown
AA seq
1747 aa
AA seq
DB search
MLVSLHLSSSPFSDRRVLSFVSLASSSKPPLSLSLLLLSLFFFPTCESRRGGGIGTPIGG
MSGGERGQSIISPPHYPPPGVNPVGPPLPPKFAQGLSIAVILVGNSSEGSLSEGLEKEDF
LHVPLPPKVELVTMNETDPKSIINRICALMSRNWLQGVVFGDDTDQEAIAQILDFISAQT
HIPILGIRGGSSMIMAAKDDHSMFFQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYYPGY
QDFVNRIRSTVENSFVGWELEEVLLLDMSVDDGDSKIQNQMKKLQSPVILLYCTKEEAMT
IFEVAHSVGLSGYGYTWIVPSLVTGDADNVPSVFPTGLISVSYDEWDYGLEARVRDAVAI
IAMATSTMMLDRGPHTLLKSGCHGAPDKKGSKSGNPNEVLRYLMNVTFEGRNLSFSEDGF
QMHPKLVIILLNKERQYERVGKWENGSLAMKYHVWPRFELYSDTGEREDDHLSIVTLEEA
PFVIVEDVDPLSGTCMRNTVPCRKQLKLQNQTGDSGIYIKRCCKGFCIDILKKIAKSVKF
TYDLYLVTNGKHGKKINGTWNGLVGEVVLKNAHMAVGSLTINEERSEVIDFSVPFIETGI
SVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVFEYVSPVGYNRCLADGRE
PGGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFM
IQEEYVDQVTGLSDKKFQHPNDFSPPFRFGTVPNGSTERNIRNNYKEMHTYMTSFHQKNV
NEALHSLKMGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGYIFATTGYGIAIQKDSGWKR
AVDLAILQLFGDGEMEEFEALWLTGICHNEKNEVMSSQLDVDNMAGVFYMLGAAMALSLI
TFIAEHLFYWQLRFCFMGVCSGKPGMTFSISRGIYSCIHGVQIEENKSALNSPSATMNMN
MNNTHSNILRLLRTAKNMTSVPGVNGSPRSALDYSHRESAVYDISEHRRSLVGHTDCKPP
PYLPEDNMFSDYVSEVERTFGNLHLKDSNLYQDHYLHHHGGTGSDLALGMSGPLPNRPRS
LGSASSLEGGYDCDSLGGGVAPIFTTQPRQSLTHRNREKFDLIAGHPTQSSFKSGLPDLY
GKFSFKGEASSSGFIAGHDRYCGGGGVGSGGDDGNIRSDVSDISTHTVTYGNLEGHGKRR
KQYRDSLKKRPASAKSRREHDEIELGFRRRPHHTIHHHHHHHPATQAHRSATPPVERKSL
RGGNSTSYLFRDKENLRDFYVDQFQAKEGASPWEHLDLSDAPGMGGGVGLGGGGCGGVVS
SGGAGGACTSLVPMEDFLKGKSKKTECKGGMGGGSPGQQGHACWEKGIGGVGGLAGGDWE
CRNCHSGGVGSGGSKPVCMHGGGGAGGVGGTSGGSGQISSRPSSATCKRCDSCKKPGNLY
DISEDNHLLLDQTGGKHPLESGKGGGGTGAQTQVQRRKFGPGGKVLRRQHSYDTFVELQK
EGAGRMGGFGGSGGASMLPPPRSVSLKDKDRYMEGTSPYAQMFEQYAGGERETSYFGDRG
KGGGSSFSLFRGGEGGLHRRSVGERDMRDRDRGMMGGGVGGTRGVGTYSLSKSLYPDKVN
QNPFIPTFGDDQCLLHGAKSYYIKKQQAQPQQQQLLNNSRADFRGSMGVTSYLPASATSG
VLSNVAPRFPKELCLGGPLGNHYGGGPSNNKLLSARDGLGMGQGQRPFNGSSNGHVYEKL
SSIESDV
NT seq
5244 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtcagcctccacctctcctcttcccctttctccgaccgtcgcgtcctgtctttt
gtctccctggcttcttcctccaaaccgcccctctccctctctctccttctcctctctctc
ttcttcttccccacctgcgagtctcgccgtggaggcgggatcgggacgcccattgggggc
atgagcggcggcgagcgcggccagtcgataatcagccctcctcattatccgccaccagga
gttaatccagtgggtcctccattgccaccaaagtttgctcaaggcctcagcatcgcagtg
atccttgtgggaaactccagcgaggggtccctctctgaaggtctggagaaagaggacttc
ctccacgtgcctctccctccgaaagtcgaactggtcacgatgaacgaaaccgaccccaag
agtatcataaaccgcatctgtgctttgatgtcgcggaactggctccagggtgtggtgttt
ggggacgataccgatcaggaggccatcgcccagatattggacttcatctcagctcagacg
cacatccccatcctgggcatccgtggaggctcttccatgatcatggcagccaaggatgac
cattccatgttcttccagtttggaccctctatagagcagcaggcctctgtcatgcttaac
ataatggaggaatatgactggtacatattctccattgtcaccacctactacccaggatac
caggactttgtcaatcggatccggagtaccgtggagaacagttttgttggctgggagctg
gaagaggtgctgctgttggacatgtcagtagatgatggcgactcaaagatccagaaccag
atgaagaagctccaaagtcctgttatactactgtattgcactaaagaagaagccatgacc
attttcgaggtggcacattctgtcggcctcagtggttatggttacacctggattgtacca
tctctggtgacaggggatgcagataatgtacccagcgtctttccaacaggtttgatctct
gtttcctatgatgagtgggactatggactggaggctcgagtacgtgatgctgtagccata
atcgccatggcaacctccacaatgatgctggatcggggtcctcacacgctgcttaagtct
ggatgccacggcgcacctgacaagaaaggcagcaagtcaggaaaccccaacgaggtgctg
aggtacctcatgaatgtgacatttgaagggcgcaacctctcctttagtgaggacggtttt
cagatgcacccaaagttggtcattatactgttaaataaggagaggcagtatgaaagggtt
ggtaaatgggagaacgggtctctggcaatgaagtaccacgtgtggcctcggttcgagctc
tactcggatactggggagcgggaggatgaccacctgtccattgttacgctggaggaggct
ccatttgttattgtggaggatgttgaccccctcagtggcacctgcatgcggaatacagtg
ccgtgcagaaaacagctcaaactccaaaatcagacaggagattcagggatctacattaaa
cgctgttgcaagggcttctgtatagacatcctcaaaaagattgccaagtcggtaaaattt
acctacgatctctacctggtgaccaatgggaagcatggcaaaaagatcaatggcacatgg
aatggcttggttggagaggtggtgttgaagaatgcccacatggcagtggggtccctgacc
attaatgaagagaggtcagaggtcattgacttctctgtgcccttcatagagactgggatt
agtgtcatggtctctcgtagcaatggcacagtgtcaccttctgcctttttagagcccttc
agcgctgatgtctgggtaatgatgttcgttatgctgttgatagtttcagctgtggctgtt
ttcgtttttgagtacgtcagtcctgttggctataatcgctgcttggcagatggacgagag
cctggcggtccctccttcaccatcggaaaagctatttggctactttggggtttggtcttc
aataactctgtgcccgtgcagaaccccaaaggcactactagcaagatcatggtctcagtc
tgggccttcttcgctgtgattttcctggccagctacactgccaacctggccgcatttatg
attcaagaggaatatgtggaccaggtgacgggcctgagtgataaaaagtttcaacatccg
aatgacttctcccctccattccgcttcggtactgtgcccaatggcagcacagagagaaac
ataaggaacaactacaaagagatgcacacctatatgaccagcttccaccagaagaacgta
aacgaggccctccacagcctcaagatgggtaaattggatgcattcatctacgatgcagcg
gtcttgaactacatggctggacgtgatgagggatgtaaactggtgaccatcggcagtggt
tatatctttgctactacagggtatggcattgccattcagaaagactcaggctggaagaga
gcagtggatctcgccattctgcagctctttggagatggtgagatggaggaatttgaggcc
ctgtggctgactggcatctgccacaatgagaaaaatgaggtgatgagcagtcagctggat
gtagacaacatggcaggtgtgttctacatgctgggagctgcaatggccctgtcccttatc
acattcatcgcagagcacctcttctactggcaactgcggttctgcttcatgggtgtgtgc
tcgggcaagcctggcatgaccttctccattagcaggggcatctacagttgcatccatggt
gttcagattgaagagaacaaatcagcccttaactcaccatcagccactatgaacatgaac
atgaacaacacccactccaacattctccgtttgttgcgtactgccaaaaacatgacctct
gtacctggggtcaatggttcacctcgcagcgcactggactacagccatcgtgagtcagcc
gtttatgacatcagtgaacaccggcgcagcctagtaggccacacagactgcaagcctcca
ccgtacctgccagaggacaacatgttcagcgactatgtaagcgaggtggagaggactttt
gggaatttgcacctgaaggacagcaacctgtaccaggatcattacctacaccaccatggg
ggcacgggatccgacctggctctcggtatgtcgggtcccctgcctaaccgacctcgtagc
ttagggagtgccagttcattggagggggggtacgattgtgacagcttagggggaggggta
gcgcccatcttcaccacccagccaaggcagtcgctgacacatcggaacagggaaaagttt
gacctgattgcgggtcaccccacccagtcaagcttcaagtccggcctgccagatctatat
ggaaagttctccttcaagggtgaggcatccagttcagggtttattgcaggacacgacagg
tactgcgggggaggtggggtgggatcaggaggggacgacggaaacattagatccgacgtg
tctgatatttccactcacactgtgacctacgggaacctcgaggggcatggcaaacggcgc
aagcagtacagggacagcctaaaaaagagacctgcttctgccaaatctcgccgtgagcat
gatgagattgagcttggcttcaggagacgtccccaccacacaatccatcaccatcaccac
catcatccagcaacacaagcacaccgctcagccaccccacctgtggagcgcaagagcctg
agaggtggtaacagcacctcctatctattcagagacaaagagaatttgagggacttctat
gtggaccagtttcaagccaaggaaggggcatccccatgggagcatttggatttaagtgat
gctccaggaatgggtggaggagtgggactgggtggaggcggttgcggtggagtagttagt
agcggtggtgctgggggagcgtgcactagtttggttcccatggaagatttcctgaaaggt
aaatccaagaagacagaatgtaagggtggaatgggaggaggatcgcctgggcaacagggc
catgcatgctgggaaaagggcatcggaggggtgggggggttggctggaggggattgggaa
tgtcgcaattgccacagtggaggggttggaagtggaggaagcaagccagtttgcatgcat
gggggaggcggggctgggggagttgggggaaccagtggagggagtggacaaatctcaagc
cgccctagttcagccacctgcaagcggtgtgattcgtgcaagaaaccgggcaacttgtat
gacatcagtgaggacaaccacctcctcttggatcaaactgggggcaagcaccctctggag
agcggaaagggagggggaggcacaggggcccaaacccaggtacagaggcggaaatttggc
ccaggtggtaaggttttgcgcaggcagcactcttatgacacatttgtagagctgcagaag
gaaggggcgggcaggatgggagggtttggaggcagtggtggagcgtcaatgcttcctcca
ccccgaagcgtgagcctaaaagacaaagaccgctacatggagggcacgagcccctacgcc
cagatgtttgagcagtatgcgggaggggagcgggagacatcatattttggggacagaggg
aagggcgggggttcatcatttagtttatttcgtgggggtgaaggtgggttgcaccgtcgc
tccgtgggtgagagagacatgagggacagggatagaggcatgatgggaggaggtgtgggc
ggtacccgaggggtcgggacttactccttgtctaaatctctctacccagataaggtgaac
cagaacccattcatcccaaccttcggcgacgaccagtgtctattacatggcgccaaatca
tactacatcaaaaagcagcaggcacagccgcagcagcaacagctcctcaacaacagtcgg
gctgacttccggggctccatgggggtgacttcctatttgcctgcttccgcaacttctggg
gtactgtccaatgtggcccctcggttccccaaggagctatgtctgggcgggcctcttggc
aaccactacggtggaggacctagcaacaacaagctgctgtcagcaagggatgggttagga
atgggtcaaggacagagaccgtttaatggctcgagcaacggacatgtttacgagaagctt
tccagtatagagtctgatgtctga
DBGET
integrated database retrieval system
