Sinocyclocheilus grahami (golden-line barbel): 107552029
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Entry
107552029 CDS
T04918
Name
(RefSeq) afadin-like
KO
K05702
afadin
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04517
IgSF CAM signaling
sgh04520
Adherens junction
sgh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
107552029
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
107552029
04530 Tight junction
107552029
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DIL
RA
PDZ
RA_2
PDZ_6
PDZ_2
RA_3
Motif
Other DBs
NCBI-GeneID:
107552029
NCBI-ProteinID:
XP_016089321
LinkDB
All DBs
Position
Unknown
AA seq
1078 aa
AA seq
DB search
MKQKQRNAIDSGHGAEMNPEERRRLQENIQQWNSNRLSLFEITEPDEDSVFHGVIRFHLQ
DHISGNCATKCICISSASTTQEVIEMLLEKFQHDGTSQPLSYSLYEVLKNQEERKLDLSE
KPLVVQLNWNKDTDGRFVLRNDSCVTLQDGCLENKEKVGVIENFKRTLSKKEKKPKQKKN
VSSSHMLENSVSGSKTNRVTQDYLEVNWNLPLSISLKEKDEDSFLLAVINDINSSTIHFK
LSPAYVFYLVGRFLTSHKPMQSEQKVCMVFDKIVHLIQGVIQKQRNIAVALAFWMANTSE
LLNFIRRDRDLCPITLQAQNTLTQLVQQGFRYLSHRLQVDLENQLPAFFADVKKEKEIEG
VLNTLVKTMSLLRRCRVNPALSIQLFSQLFHLMGAWILNRLTVPGSTLCSNYWGKTLRQR
LMHVEAWAERQGLELAVDCHLSRVIQATMLLTMTSYSTRDAQMIQSTCYKLNSLQLRALM
SKYHYIPNQPHFSAALIEHVAALAETTTDVLRREGGEIRLEEELDLHLPFLLPEDGYSSD
SMHGIPKGFQEFLEPVCRKGLCKLIPHSNCVGTWTIFFSPSDHSAKGSAWKPEPMKITLK
KPLHGGMGVSIVAAKGAGQDKLGIFIKSVVQGGAANEDGRLNPGDQLLSVDGKSLVGVSQ
ERAAEIMMHTGSVVSLEIVKSAAVYYGFEGVFTQSPQTTCKDHDNDGPSKQKSSVSDLHD
SAEPSLSGSSRPSETFRNQHTISRLNTKQNQKWLKQKLDYRSNPNLAYNQEMPVDSVPPE
KMTLSFSIENLMDSGKQRNTLSNAEAFHREYLTLPTSKPHSNKTPRTTKHPPHIAPFSRD
QQKSNFMKQALSQDNLWSEEKGGPLVDRQRYFKKQPDLSKWNSIATISPMDSSLSSLGHR
NGLWKIPTTTQSVPLSQPKRMDVPYTPQANSLSFSTFRQPVESQSMSPAHHQYQKQSNAS
PSQRPQQGLKKKTVVFQNSSASCLSANPQQKGPDKIKKLSVGDSWKRDAQDKQQTADLLQ
QEVQQLQAKVQRSIEESERLRRLSLELQFQKRLEEFQQNGEEDDDYDNWFRDFLFTNV
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaaaacaaagaaatgctattgattcgggtcatggtgctgagatgaatccagag
gagcgcaggagacttcaggaaaacatccaacagtggaattcaaaccgactcagcttgttt
gagataactgaacctgatgaggattctgtatttcatggagttattcgtttccacctccaa
gaccatatttcagggaactgtgccacaaaatgtatttgtatctcaagcgcttctaccaca
caagaggtcattgaaatgctgctggagaagtttcaacatgatgggacctcacagccttta
tcatattcgttgtatgaggtcttaaaaaatcaagaagaaagaaaactggacctttcagaa
aagcccttggtggttcaactcaactggaataaagacacagatggcagatttgtcttgagg
aatgacagttgtgtaactttacaggatggctgtttggaaaataaggaaaaagttggagta
attgaaaatttcaagaggacattatcaaagaaagagaagaaacctaaacagaagaaaaac
gtttctagcagtcacatgttagagaacagtgtctctggcagtaaaacaaaccgtgtgaca
caagactatttggaagtaaattggaatctcccgctcagcatttctttaaaggaaaaagat
gaggattctttcttgcttgctgtgataaatgacattaacagctccacgattcactttaag
ctctcgcctgcgtatgtgttttatctggttgggcgatttttaaccagccataaacctatg
cagtctgaacagaaagtctgcatggtatttgacaagattgtgcacttgattcaaggcgtc
attcagaaacagaggaacatcgcagtggctcttgccttctggatggccaacacatctgag
ctcctgaacttcatcagacgggacagagatctgtgtcccatcacgctccaggctcaaaat
actctcactcaacttgtgcagcagggtttcaggtacttgtcacatcggcttcaggttgat
cttgaaaatcaattacctgcattctttgctgatgtaaaaaaggaaaaagaaatagaaggc
gtcttgaacactctcgtaaagaccatgagtttgctccgaaggtgtcgggtcaaccctgct
ctgagcatccagcttttttctcagctctttcacttgatgggggcctggatcttgaaccgg
ctcaccgtgccgggatccacactgtgctcgaactactggggcaaaactctacggcagcgt
ctgatgcacgtggaggcctgggcagaaagacaagggctggagctggccgttgactgccat
ctcagtcgtgtaatccaggcgacgatgcttctaaccatgacctcttactctacacgagac
gcccagatgattcagtccacatgctacaagctgaactcgctacagctgagagcactgatg
agcaaatatcactacatcccaaatcaaccccacttttcagccgcactgatagagcatgta
gccgctttagcagaaaccacaacagacgttctgagacgagagggtggagaaatccgactg
gaagaagaactggaccttcacctgcctttcctgttgcctgaggatggatattcaagtgat
tccatgcatggcattcctaagggatttcaggagtttttagaacccgtctgtcgcaaaggt
ctctgtaaattaattccccattccaactgcgttgggacttggaccattttctttagccca
tcggatcactccgcaaagggttcagcttggaaacctgaaccaatgaaaataactctaaag
aaacctttgcatggtggaatgggagtgagcattgtagctgccaagggggctggacaggat
aagcttggcatttttatcaaatctgtcgtccagggaggagcagcaaatgaggacggcaga
ctgaatccaggagatcagttactgagtgtggatggcaaaagtcttgtgggtgtgtcacag
gaaagggctgcagagataatgatgcacactgggtcggtcgtatcactggaaattgtcaag
tcagcagctgtatattatggttttgagggagtatttacccagtcgccacaaacaacatgt
aaagatcatgataacgatggaccatccaagcagaaatccagtgtctctgatcttcatgac
agtgccgaaccatctctttctggttcatcaagaccatcagaaacctttagaaaccagcac
acaatcagcagactgaacacgaaacaaaaccagaaatggctcaagcagaaactggattat
cgttccaatcccaacctggcatataaccaggaaatgcctgtcgattcagttcctcctgaa
aagatgacattatccttctccattgaaaatctcatggattctgggaaacaaagaaacact
ctttcaaatgcagaggcttttcacagagaatatctgaccctgccaacatccaaaccgcac
agcaataaaacaccaagaaccactaaacatcctccacatattgcaccattctccagggat
cagcaaaagagcaactttatgaaacaggcactttctcaagacaatctctggagtgaagag
aaaggaggtcctctagtggacagacagaggtatttcaagaagcagccagatctgagcaaa
tggaacagcattgcaaccataagcccaatggattccagtttatccagcctgggacacaga
aacggactctggaagatcccgacaacaacccagtccgtgcctctatcacagccgaaacga
atggacgtcccatatacaccacaagccaacagtctttcattcagtacgttccgccagcct
gtggagagccaaagtatgtctccagcacaccatcagtatcaaaaacagagcaatgcatca
ccatctcaaagaccacagcagggtctcaagaaaaaaacagtcgtcttccaaaacagctca
gcctcgtgtctaagtgcgaaccctcagcagaaagggcccgataagatcaaaaagctttct
gttggagattcgtggaagcgggatgctcaggataagcaacagactgcagacctgctgcaa
caggaagtacaacagctgcaggctaaagtgcagcgcagcatagaggagagtgaacgtctg
cgcagactctccctagagctgcagttccagaagagactggaggagttccagcagaatggt
gaagaggatgatgattatgataactggtttagagatttcctttttaccaacgtgtga
DBGET
integrated database retrieval system
