Sinocyclocheilus grahami (golden-line barbel): 107552258
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Entry
107552258 CDS
T04918
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03018
RNA degradation
sgh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107552258
09123 Folding, sorting and degradation
03018 RNA degradation
107552258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgh03019
]
107552258
03041 Spliceosome [BR:
sgh03041
]
107552258
Messenger RNA biogenesis [BR:
sgh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107552258
mRNA degradation factors
5'-3' decay
Lsm complex
107552258
Spliceosome [BR:
sgh03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
107552258
Complex C
U2 snRNP components
107552258
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
DYW_deaminase
Motif
Other DBs
NCBI-GeneID:
107552258
NCBI-ProteinID:
XP_016089601
UniProt:
A0A672MF69
LinkDB
All DBs
Position
Unknown
AA seq
95 aa
AA seq
DB search
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNC
FIRGSVVRYVQLPADEVDTQLLQDAARKEAMQQKQ
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgctcttctactcgttcttcaagtccttggtcggcaaagatgttgtggtggagctcaag
aatgacttgagcatttgtggaacattacactcagttgatcagtatctgaacatcaaactg
acagatatcagtgtcactgatcctgagaaatatccgcacatgttgtcggtgaaaaactgc
tttatccgtggatcagtagtgcgatacgttcagcttcctgcagatgaggtggacacacag
ctactacaggatgctgcacgcaaagaagctatgcaacagaaacaataa
DBGET
integrated database retrieval system
