Sinocyclocheilus grahami (golden-line barbel): 107552261
Help
Entry
107552261 CDS
T04918
Name
(RefSeq) rootletin-like
KO
K16469
rootletin
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sgh03037
]
107552261
Cilium and associated proteins [BR:
sgh03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
107552261
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rootletin
CALCOCO1
ATG16
Motif
Other DBs
NCBI-GeneID:
107552261
NCBI-ProteinID:
XP_016089606
LinkDB
All DBs
Position
Unknown
AA seq
1946 aa
AA seq
DB search
MSCEGDQGLEAVIQKLEETILNPDCSAEEKTYTLRGDEEEFSATPVPARIREIITRNLAD
TPTGESSEVEENRLPKDLLSQMRTGRDQLSRQAALTSRLDQMLLQQSGDSEQQSVHGAEQ
GWLREEGRSYRLKLQAFQESQHRQAQLVQKLQAKLLQYKKRCENVEQQVLEKTSESEKLR
LSLQSHLDSSAHRLQRFEQEHSKLALLEDEQKRCSGLSQVNALLRELLEQANEANQALME
SLQKAQQEAEQRDTRLRRELEMNTSRNGREQACVRSLWRQAAFLRSSFTQLRAFADRSLS
DMRAECVVAGHRLHTACVNLEASMSKPCTPASSGVSALENQLRHKLKEAMQLQARFDAEK
VELNSRILELGEMVKQLRAQNIEKESNLTALRSSLDRMEINWSEDRTERDALHRELSSLQ
QLLHNINQVVSGNSSSDSSKDEHPSVSAGSISSSKRDGILIAVQRALLQRQAQIQELQAR
LEASQEQVATLRDQLHVGEDESRSLEQRIRELQQENQLLERSEEGSTRHAQRYRTSLGIV
TSEKRELERQLSALQQQLECTQAEQEALRGSSLDVQRQRDLLRQQREDLERQLARECSES
ERGRHILEQLEIRHSDMSKELVTLKEALSQLTLQKEVLEDEKSSLAQALSRAEAQNAEQE
LVLTKLRSEDAGLQDSLAKMGALSEGLAKDKVELNRLLLQVESEKAELGERKREAELERA
AAREELGRFQQELLDLTVEKRALEASHIHLQETRVTQNAEYNLLQREKSSALEQHAQVSK
QKQALQEQLNTCRREMELSAASLKKTCKERDELARDKANLTVQLTSEQRKSKALAQDLAS
LRAERESLESGLLDRQELTSMLEADRARLVGENASLQQANETLTRELSSVHGEHEQQMSW
ALQEKQALELKLAQVERNAQQALITTQQSHQEQLHTERKHKERMRAELCAQREQAESQLW
AECEELRMQSRRVQQQLQEELAKLQQHCTESLLQAESHKQQVLSKKEAEKATLSERIITL
ERDTETAAFEKDRMRRDFLSKQEQDKDTVLGLQAEFQDLRSRFEESLSSREVSERSLNDQ
IRELSMQRQEAQQEVERLRRELSEVEGSRDSGRKELMEAHRELRECLQDRDTQRREGMEL
KRDLGDVVREKEAIQASNHELRTAVKRAEFENNSLKRVGEEKDQRLTVLEECKSSLQQEV
LKLRTNMRELEKSRLQARRELQELRRQVKTLQGQCTQQGQELSDMQARLTQEEHREEKMR
KETFTLRQRVLESDTGREAALKEAAGLQWRVADLEEAQRQEKELQQQRDADLQESQVKQR
EEVARLEGALQEAQAQLRELGLKVSLAEAQGLEEQLGQNDAIRRDLEHRLNVLSSTLRRT
LGSGRGRQSPAPGERGRSPSPWRTRSPVKGESMSDEPGVSGLPVCSLSPSPGEEGELDLD
SVHMLLRSFQQELRDTQRERDKAQAQAHRLSKQVESLQASQERGNTRIQMLKQSIRELEE
GKRELVKHLEGTQASLALRDEAVQSGELQNRIMSEELAKMKNSQQITEAEAKALQEKLER
SQASEESLEAERRRMKEICEAAEARAARLELTRRGLEGELQRAQLRATEMESEVSSLQER
LNKLRRELGDSEERAALLKVEGERSATTLAHTELQESHLREQLQAMAASLIESNAATGTA
QDQAAQLQRVLTASEYDRKMLQERLDKTREALTNSRKQNHGLSERLQILQRSQEESELRV
SELDKQKRGLQEAVRQRQQAEQEVQESYALLQGEKEQVATLQTTAHRLQGEKAELERTLL
CLEKDRSSLKRTLEKVEKNRQRKVVEVLHAEHEREQQEQKIRNLEQDLSETQTEIHTLQS
QISILEQTHSQRLLEVTARHREELDLETERMRDSQQQAERALAAREKAHRQRVHCLEEQV
CTLKEQLEQEMKRRQAYMKQMLRLGL
NT seq
5841 nt
NT seq
+upstream
nt +downstream
nt
atgagttgtgaaggggatcaaggactggaagccgtgattcagaagctggaggagacaatt
cttaacccagattgcagtgcagaggagaagacttacactctgcggggagatgaggaggag
ttcagcgccacaccagttcctgcccgcattcgtgagatcatcaccagaaacctggctgat
acgcccacaggcgagagcagcgaggtggaggagaaccggctgccgaaggatctgctttct
cagatgcgcacaggcagagaccagctcagcaggcaggctgctctcacgagccggctggat
cagatgctgttgcagcagtcaggcgattcagaacagcagagtgtgcatggcgcagagcag
ggttggctaagagaggaaggacgatcttataggctgaagctccaggcctttcaggagagc
caacacagacaggctcagctggtgcagaaactacaggcaaagttgctccagtataagaag
agatgtgaaaatgtagagcagcaggtgctggagaaaacctcagagtcagagaagctgagg
ctctcgctccagtcacacctagactcttcagcacaccgtctccagcgctttgagcaggaa
cacagtaaacttgcactgctggaggatgagcagaaacggtgttctggtttgagccaggtc
aatgcgctgctccgggaactacttgaacaagccaatgaagccaatcaggccctgatggaa
agcctgcagaaggcacaacaggaggcagagcagagggacacgcgactcaggagggaactt
gagatgaatacctcccgaaacggccgcgagcaagcttgtgtgcgatctctgtggcgccag
gccgccttcctgcgaagttctttcacccagctgcgggccttcgctgacaggagtctatcg
gacatgcgagccgagtgtgtggtggctggccatcgtcttcatacggcctgtgtgaatttg
gaggctagcatgagcaagccttgtacccccgctagcagcggagtatctgcactggagaat
cagctaagacacaaactgaaagaggctatgcagctgcaggcccgctttgacgcagagaaa
gtagagcttaactctaggatcctggaattgggtgaaatggtgaagcagctcagagcacag
aacattgagaaagaaagcaatctgacagcactgcggagcagcttggacaggatggaaata
aattggtccgaagaccgaaccgagagggatgccttacaccgcgagctcagcagtctgcaa
cagttactgcacaacattaatcaggtggtcagtggcaacagttcctcagactcatcaaaa
gatgaacacccatctgtttctgcaggatccatttcctcttctaaacgggacggtattttg
atagctgtgcagagagcgctcttacagcggcaggcacaaattcaggagttgcaagcacgt
ctggaagcttcccaagagcaggttgccaccttgcgagatcagctgcatgtgggggaagat
gaatccagaagcctggaacaaagaatccgggaactgcagcaagagaatcaactattggag
agatctgaggagggcagcaccagacatgcccaaagataccgcacctcactgggcatagta
accagtgaaaaaagagagcttgagaggcagctctctgccctgcagcagcagctggaatgc
acacaagcagagcaggaagctttgagaggctcctctctagatgttcagaggcagagagac
ctcctcaggcagcagagggaggacctggagaggcagctggcccgagaatgctctgaatcc
gagaggggacgacacattctggagcagttggagataagacactcggatatgagtaaagag
ctggtcacactaaaggaagctctgagtcagctgactttgcagaaagaggttctggaggac
gaaaagagcagccttgcacaggctctctctagagcagaggcccagaatgctgagcaggaa
ctggtgctcactaaactacgaagtgaagatgcagggctacaggactccctggccaagatg
ggagccctgagtgagggattggctaaagataaggtcgaattgaaccgtcttctcttacag
gtcgagtccgaaaaggcagagcttggagaacgcaaacgggaggcagagctagagcgagca
gcagccagagaggagctaggtcgatttcagcaggagctgttagacctaacggtggagaag
cgtgctctagaggcctcccacattcaccttcaagagacccgagtgacccaaaatgcagag
tacaacctcctacagagggagaaaagttcagccctggagcaacacgcccaggtcagtaag
cagaagcaagccctgcaggaacagttgaacacatgtcgtagagaaatggagcttagtgct
gcttcgctaaagaagacttgcaaagagagagatgaactagcaagagacaaagccaatctc
acagtgcaacttacctcagagcaacgtaaatccaaggccctggcccaagacttggcctct
ctgcgggcagagagagagtctctagagtcaggtctgttggacaggcaggaactgacctcg
atgctagaggctgaccgggctagactagtaggagagaatgctagtctacagcaggctaac
gagactttgacacgtgagctgtctagtgttcacggtgaacacgagcagcaaatgtcctgg
gctttacaggagaaacaggctttagagttaaagcttgctcaggtcgagagaaatgcacaa
caagccctcattacaacacagcaaagccatcaggaacaactgcatactgagcgaaagcac
aaggagcgcatgcgtgcggagttgtgtgcacagagggagcaggcagagtcgcagctgtgg
gctgagtgcgaggagctgcgcatgcagagtcgcagagttcagcagcagctgcaggaagaa
ctggccaagctgcagcagcactgtacagagtccctgctgcaggccgagagccataaacag
caggttctgtctaagaaggaggcagagaaggctactctttctgagcgcataatcaccctt
gagcgtgacacagagacagctgcctttgaaaaggatcgaatgcgtagagacttcctgagc
aaacaggagcaggacaaggacactgttttagggttgcaggcagagtttcaggacctacgg
tctcgtttcgaggagtctctgagttcccgtgaagtttcggagcgcagcttaaatgaccag
atcagagagctttctatgcagaggcaggaggctcagcaagaggtggagcgtttgaggagg
gaattgagtgaggtggaggggagcagggactctggccgtaaggaactgatggaggcccac
cgagagctaagggagtgtttgcaggacagggacacccagcggcgtgagggcatggaactg
aagagagatttaggagatgttgtgagagagaaagaggccatccaggcttctaatcatgaa
ctccgaacagctgtgaagagagccgagtttgaaaacaacagtttgaagcgagtgggagaa
gaaaaggatcagaggctgacagtgttggaggaatgtaaatcctccctccagcaggaggtg
ctgaagctgagaaccaacatgcgtgaacttgaaaaatctcgcttgcaggcacgcagagaa
ctgcaggaactgcgcaggcaggtaaagacattacagggtcagtgcactcaacaagggcaa
gagttgagtgacatgcaggccagactgacccaggaagagcatagagaggagaaaatgaga
aaggagacctttactctcagacaaagagtactggaaagcgatactggcagagaggcagct
ctgaaagaggctgcaggcttgcagtggcgtgtagcagacctggaagaagcacagcgccag
gagaaagagttgcagcaacaacgggatgctgatcttcaagagagccaagtgaagcagcgt
gaggaggttgctcgcttggagggggcactgcaggaggcccaggcccagctcagggagctt
gggctgaaggtgagtctagcagaggcccaggggctggaagagcagctgggacagaatgac
gcaatacggagagatcttgagcacaggttgaatgttctcagttctaccctaagacgtaca
cttggaagcggacgtggaagacagtcacctgcacctggggaacgtggacggagtccctca
ccatggagaactcgatcacctgtgaaaggtgaaagcatgtcagatgaacctggggtgagt
ggattgccggtgtgttctctgtccccctcccccggagaggaaggagaattggatttggac
tcagttcacatgttgctgcgtagcttccagcaagagctcagggacacacagagagagcgg
gataaggcccaagcacaggcgcataggctcagcaagcaggtagaaagcctgcaagccagt
caggagagaggcaacacgcgtatacagatgctgaaacaatctatcagagagctggaggag
ggaaagcgtgagttggtcaagcatttagaagggacacaagcatcactcgccttacgggat
gaggcggttcagagtggggaattacagaataggattatgagtgaagagctggccaaaatg
aagaacagccaacagataactgaggcagaggccaaagcactgcaggagaagctggagcgc
tcccaggcctctgaggaaagtctggaagctgagcgtcgccgtatgaaggagatctgtgag
gccgcggaagctcgagctgccaggctggaactcacacgccgggggttggagggagagctg
cagcgtgcccagctccgagccacagagatggagtcggaggtcagctcactgcaggaacgc
ctcaacaaactccgcagagaactgggagacagtgaagagcgtgctgccctcctgaaggtt
gagggtgagaggtcggcaactaccttggcacacacagaactgcaggagagccatttgagg
gagcaactgcaggccatggctgcatccctgattgaaagcaatgctgctacaggaacagca
caggatcaggccgcccagctgcagcgagttctcacagccagcgaatatgaccggaagatg
ctgcaggaaaggttggataagacacgggaggctctgacaaacagtaggaagcaaaatcat
gggttgagtgagagactacagatcctgcagagaagccaggaagagtctgaactcagggtc
tctgaactggacaaacagaaacgaggcctgcaggaggctgtgagacagaggcaacaggct
gaacaggaggtgcaagagagctatgcactcttacagggagaaaaggagcaggtggctact
ttgcagaccactgcacatcggctgcagggagagaaagctgaactggagaggacactgctc
tgtctggaaaaagacaggtcctctctaaagcgtaccctggagaaggtagaaaagaatcgc
caaaggaaggtggtggaggtactgcatgctgagcatgagagagaacagcaagaacaaaag
atccgaaatctagagcaagatttaagcgagacacagaccgaaattcacacactacagtca
caaatctctatcttggagcagactcactcccagaggctcctggaagtgacggctcgccac
agggaagagctggacctggagacagagcggatgagggactcccagcaacaggcagagaga
gcactggcggcccgagagaaagctcaccgccagagggtccactgcttggaggaacaggtt
tgcacactgaaagaacagttggagcaggagatgaagaggaggcaagcatatatgaagcag
atgctgagattggggctctaa
DBGET
integrated database retrieval system
