Sinocyclocheilus grahami (golden-line barbel): 107552386
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Entry
107552386 CDS
T04918
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04517
IgSF CAM signaling
sgh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
107552386
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107552386
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sgh04812
]
107552386
Cytoskeleton proteins [BR:
sgh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
107552386
Intermediate filaments
Intermediate filament-binding proteins
107552386
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
CAMSAP_CH
CH_2
Zw10_N
Motif
Other DBs
NCBI-GeneID:
107552386
NCBI-ProteinID:
XP_016089741
LinkDB
All DBs
Position
Unknown
AA seq
1323 aa
AA seq
DB search
MTTVAAEYEHMDIQQQYQDSVNNRWEEEWDNENSSARLFERSRIKALADEREAVQKKTFT
KWVNSHLSRVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQ
FLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKRSAKDALLL
WCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHHNLQNAFNLA
EQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAIETE
KMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGN
LEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRTELIRQEKLE
QLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDITAYEERVQAV
VAVARELETENYHDIKRIAARKDNVLRLWEYLLELLKARRQRLEMNLGLQRVFQEMLYIM
DWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIGIQADRVKAVNANAQKLAVDDEGY
KPCDPQVIRDRVAHMEFCYQELTQLAVERRARLEESRRLWKFFWEMAEEEGWIREKEQIL
SSDDCGKDLTGAVRLLSQHRALEDEMSGRAGHLQHTVREGQAMADAGHFGEDKIRERIAD
IQAQWAALEQLAAVRKKRLEEACSLHQFQADADDVDTWTLDALRIVSTADVGHDEFSTQA
LVKKHKDASAEVASYRSVIDALHEQAQSLPPEQVQAANVNERLAGIEERYKEVSELSRLR
KQALQDALALYKMFSEADACEHWIDEKELWLNSMEIPEKLEDLEVIQHRFESLEPEMNNQ
ASRVAVVNQIARQLIHSGHPSEKDIKAQQDKLNTRQVIAFCAGDKCIFKFCVESTNTSCF
LILLSDKPGICIVISACLQEGKQLVSEKPETEAVVKEKLAALQKMWTELETTTQTKAQCL
FDANKAELFTQSCADLDKWLVGLEGQIQSDDYGKDLTSVSILMKKQQMLENQVEVRQREV
EELQSQAHVLRQEGKDTDEVDGRRKEVELKFKELLEPLQKRKDFLMASREIHQFNRDMED
EILWVEERMPIATSTDHGHNLQTVQLLMKKNQTLQKEIQGHQPRCDDIFERSQSILKADS
PNVEAIQARLSDLQQLWSLIIQETEKRHARLEEAHKAQQYYFDAAEAEAWMSEQELYMMS
EEKAKDEQSSVAMLKKHQILEQAVEDYAETVHQLSKTSRGLVAANHPERYRTQLHTLGPI
LTI
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagtagccgcagaatacgagcacatggacatccagcagcaataccaggacagt
gtcaacaaccgctgggaggaagaatgggacaatgagaacagctcggcccgattattcgag
cgctcgcgcatcaaggctctggcagacgagcgagaggccgtgcagaagaagaccttcact
aaatgggtgaactcacacctgtctcgcgtgtcctgccggatcacggatctctacatggac
ctgcgggatggacggatgctcatcaagctgctggaggttctgtccggagagagactgccc
aagccgacgaagggccgcatgcgaatccactgtctggagaacgtggacaaggccctgcag
ttcctcaaggagcagcgcgtgcatctggagaacatggggtcacatgatatcgtggacgga
aaccaccgactcacgctcggcctcatctggaccatcatcctccgcttccagatccaagac
atcagcgtagagacagaagacaataaagagaaacgctcagccaaggacgcgctgctcctg
tggtgccagatgaagaccgcaggctaccccaacgtcaacatccacaacttcaccaccagc
tggcgtgatggaatggctttcaacgccctcattcacaaacacaggccagacctgattgat
ttcgacaaactgaagaagtccaacgctcaccacaacctgcagaacgccttcaacctggcg
gagcagcacctggggctcaccaaactcctggacccagaagatatcagcgtagaccatccc
gacgagaagtctgtcatcacttatgtcgtcacatactaccattatttctccaagatgaag
gcgctgaaggtggagggcaagcgtatcggaaaggtgctcgacaacgccatcgagacggag
aagatgatcgagaaatatgaatctctggcgtctgatctgctggagtggattgagcaaacc
atcatcatcctcaacaaccgcaagtttgcaaactctctggttggagtccagcagcagctc
caggccttcaacacttacaggacagtagagaaaccgcccaaattcactgagaaaggcaac
ctggaagtgcttctgttcaccatccagagcaagatgagggccaacaaccagaaagtgtac
atgccacgagagggcaaactcatctcagacatcaacaaggcgtgggagcgtctggagaag
gcggagcacgagcgtgagctggcgctgaggaccgagctgattcgacaggagaagctggag
cagctcgccagacgcttcgaccgcaaggctgccatgagagagacctggctgagcgagaac
cagcgcctcgtttcccaggacaatttcggattcgacctccaggcggtcgaggcagctacc
aaaaagcacgaagccatcgagacggacatcacggcgtacgaggagcgcgtgcaggcggtg
gtggccgtggccagagagctggagacggagaactaccacgacatcaagcgcatcgccgcg
cgcaaagacaacgtgctgcgtctgtgggagtatctgctggagctgctcaaagcgcgcaga
cagcggctggagatgaacctcggcctgcagcgcgtcttccaggagatgctctacatcatg
gactggatggacgagatgaagatgctgctgctgtctcaggattacgggaagcatttgctg
ggagtggaggatctgctgcagaagcacgctctggtggaggccgacatcggcatacaggcc
gaccgcgtcaaagccgtcaacgccaacgcacagaagcttgccgtggatgatgagggctac
aaaccctgtgaccctcaggtcatccgggaccgcgtggcccacatggagttctgctatcag
gagctgacccagctggcagtggagcgccgcgcccgtctggaagagtcccgccgcctgtgg
aagttcttctgggagatggcggaggaggagggctggattcgcgagaaagagcagatcctg
tcctcggacgactgcggcaaggatctgacgggcgccgtgcgtctactgagtcaacaccgt
gctctcgaggatgaaatgagcggccgcgccggtcacctccagcacacggtgcgcgaaggt
caagccatggccgacgctgggcacttcggtgaagataagattcgcgaacgtatcgccgac
atccaggcccaatgggccgctctggaacagctggctgcggtgaggaaaaaacgcctggaa
gaggcttgcagccttcaccagttccaggccgatgcggatgacgtcgacacctggacctta
gacgcgctccgaatcgtctccaccgcagacgtgggccacgatgaattctccactcaagct
ttggtcaagaaacacaaagacgcctctgccgaggtcgctagttatcgctcggtgattgac
gctcttcacgaacaggcccagtccctgcctccagaacaggtgcaggctgccaacgtcaac
gagcggctggcgggcatcgaggagcgctataaggaggtctccgagctcagcaggctgagg
aaacaggccctgcaggacgccctggcactctataagatgttcagcgaggcggacgcgtgt
gagcactggatcgacgagaaggagctgtggctcaacagcatggagatcccagagaaactg
gaggacctggaggtcattcagcacaggtttgagagtctggagcctgaaatgaataaccag
gcgtcacgcgtggccgttgtcaatcagatcgccaggcagctcattcacagcggacacccg
agtgagaaagacatcaaagcccaacaagacaaactcaacaccaggcaagtcatagcattc
tgtgctggtgacaaatgtatttttaagttctgtgtagaaagcacaaatacctcttgcttc
ctaatcttgttgtctgataagcctggcatttgtattgtaatctctgcctgtctgcaggaa
gggaagcagctggtctcggagaagccggagacagaagccgtagtgaaggagaagctggcg
gcgctgcagaagatgtggaccgagttggaaaccacgacgcagactaaagcccagtgtctg
tttgacgccaacaaagccgagctcttcacgcagagctgcgccgatctggacaagtggctg
gtgggtctggagggtcagatccaatcggacgactacggcaaagatctgaccagcgtcagc
atcctgatgaagaaacaacagatgctggagaaccaggtggaggtgcgtcagagggaggtg
gaggagctccagtctcaagctcatgtgttgaggcaggagggaaaggacacggatgaggtg
gatggacgccggaaggaggtggagctgaagtttaaggagctgctggagccgttgcagaaa
cggaaagacttcctcatggcctctcgtgagattcatcagtttaaccgtgacatggaggat
gagattctctgggttgaggagcggatgcctatcgctacgtcgacagaccatggccacaat
ttacagactgttcagctgcttatgaagaagaaccagacattacagaaggagatccagggc
catcagcctcgctgtgacgacatattcgagcgcagccagagcatcctgaaggccgacagt
cccaatgtagaggccatccaagcccgtctgtccgacctgcagcagctctggagcctgatc
atccaggagacggagaagcgacacgccagactcgaggaggcacataaggcccagcagtac
tactttgatgctgctgaagccgaagcctggatgagcgagcaggagctctacatgatgtct
gaagagaaggccaaggatgagcagagttcagtggccatgctgaagaagcaccagatcctg
gagcaggcggtggaggactatgctgaaaccgtgcaccagctgtccaagaccagccgaggc
ctcgtggccgccaaccaccccgagaggtacagaacacagttacacacattgggccctatt
ttaacgatctaa
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