Sinocyclocheilus grahami (golden-line barbel): 107552546
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Entry
107552546 CDS
T04918
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04137
Mitophagy - animal
sgh04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107552546
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
107552546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgh03019
]
107552546
03009 Ribosome biogenesis [BR:
sgh03009
]
107552546
04131 Membrane trafficking [BR:
sgh04131
]
107552546
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sgh04147
]
107552546
Messenger RNA biogenesis [BR:
sgh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
107552546
Ribosome biogenesis [BR:
sgh03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
107552546
Membrane trafficking [BR:
sgh04131
]
SNARE
SNARE associated proteins
Others
107552546
Autophagy
Aggrephagy
Other aggrephagy associated proteins
107552546
Exosome [BR:
sgh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107552546
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
Vps4_C
RuvB_N
AAA_16
AAA_14
AAA_2
RNA_helicase
AAA_5
AAA_33
TIP49
ABC_tran
Viral_helicase1
Parvo_NS1
DUF815
AAA_28
Mg_chelatase
UFD1
Bac_DnaA
AAA_17
AAA_7
AAA_22
nSTAND3
ATPase_2
IstB_IS21
AAA_18
NB-ARC
ATPase
NACHT
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
107552546
NCBI-ProteinID:
XP_016089930
LinkDB
All DBs
Position
Unknown
AA seq
693 aa
AA seq
DB search
MASGGESKNDDLSTAILKQKNRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLMK
GKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREVINGSHVFSQTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSI
DPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAA
LCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETIVEVPN
ITWEDIGGLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN
ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDG
GGAADRVINQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR
IAILKANLRKSPISKDVDVDYLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERER
QTNPSAMEVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRF
PSSNQGGSGPSQGSSGGGGGNIFNEDNEDDLYG
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgggtggagaatccaaaaatgacgatctttccactgccattctgaagcagaag
aacaggccaaataggttgattgttgatgaatccatcaatgaagacaacagtgttgtgtct
ctctctcaggcaaagatggatgagctccagctctttaggggggacacagtgctgatgaag
ggcaagaagaggagggagaccgtttgcatcgtcctgtctgatgacacctgctccgatgaa
aaggttcgcatgaacagggtggtccgcaacaacctcagggtgcgccttggggatgtcatc
agtattcagccatgtccagatgtgaaatatggaaagcgtattcacgttctgcccatcgat
gacacagtggagggcatcactggcaacctgtttgaggtctatcttaagccttacttcttg
gaggcttaccgaccaatccgtaaaggtgatattttcctggtgagaggaggcatgcgtgct
gtggagttcaaagtggtggagaccgaccccagcccatactgtattgtggccccagacaca
gtgatccactgtgagggggaacccatcaagagagaggtcataaatggttctcatgtgttt
tctcagactcatggtgaggtagagaggcgcattgtgtctcagctgctcactctgatggac
gggctgaagcaaagggctcatgtcattgtcatggcagccactaacagacccaacagcatt
gacccagctctcagacgatttgggcgctttgacagagaggtggacatcggcattccagat
gctactggaagacttgagatacttcagatccacaccaagaacatgaagcttgcagatgat
gttgatctggagcaggttgcaaatgagacccatggccatgtgggtgctgatctggctgcc
ctttgctcagaagctgccttgcaagccattcgaaagaaaatggacctcattgatctggag
gatgagaccatcgacgcagaggttatgaactccctggctgtaacaatggatgactttagg
tgggctcttagccagagcaacccatctgccctgagagagaccattgtggaggtgcccaac
atcacctgggaggatatcggtggccttgatgatgtcaagagagagctgcaggagctggtg
cagtacccagtggaacatccagacaaattccttaagtttggcatgaccccatccaagggt
gtgctgttctatggaccaccaggttgtggtaaaaccctgctggccaaggccattgccaat
gagtgccaggccaacttcatctcaatcaagggcccagagctgctcaccatgtggtttgga
gaatcagaggctaatgtccgtgagatctttgacaaggctcgtcaagctgctccttgtgtg
ctcttctttgacgagttggactccattgctaaggctcgtggtggaaacgttggcgacggt
ggcggcgctgctgaccgagtcattaaccagattctcacagaaatggatggtatgtccagc
aagaagaacgtcttcatcattggggccaccaacagaccagacatcattgaccctgccatc
ctcaggcctggccgactggaccagcttatctacatcccactgcctgatgagaagtctcgc
attgccattctcaaagctaacctcaggaagtctccaatctcaaaggacgttgatgtggac
tacttggccaagatgaccaatggcttttctggtgctgacttgactgagatctgtcagaga
gcctgtaaactagccatccgtgagtctattgagaacgagatcagacgggaacgtgagagg
cagactaacccttctgcaatggaggtggaggaggatgaccctgtgcctgagattagaaag
gaccatttcgaggaagccatgcgctttgcccgccgctccgtcagcgataacgacatccgc
aaatacgagatgttcgcacagaccctgcaacagagcagaggctttggcagtttcagattc
ccgtccagtaaccaaggaggaagtggaccaagtcagggctcttctggtggcggtggaggc
aacatcttcaatgaggacaacgaagatgatctttatggataa
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