Sinocyclocheilus grahami (golden-line barbel): 107552637
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Entry
107552637 CDS
T04918
Name
(RefSeq) retinoic acid receptor RXR-alpha-B isoform X1
KO
K08524
retinoid X receptor alpha
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03320
PPAR signaling pathway
sgh04148
Efferocytosis
sgh04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107552637
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
107552637
03320 PPAR signaling pathway
107552637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgh03000
]
107552637
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sgh03310
]
107552637
Transcription factors [BR:
sgh03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
107552637
Nuclear receptors [BR:
sgh03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
107552637
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
107552637
NCBI-ProteinID:
XP_016090055
LinkDB
All DBs
Position
Unknown
AA seq
502 aa
AA seq
DB search
METKPFLSLGLLKNSCSVAPPCLRSRPGDAGSSLNGCSGFTGTYPLQQRRISTDSSGQLL
SSPLSSSMGHRGISNHPLHPPLLSPSAMNSNLGQLHSPINGLPSPFPIINSPMGHPSMSG
LASTSMTFRPSLSPQLSSPMNAVSSSEDIKPPLGLNGVMKVPAQPTDTSLSLTKHICAIC
GDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCIIDKRQRNRCQYCRYQKCLAM
GMKREAVQDERQRAKERSEGEFGSCANEDMPVEKILEAELAVEPKTETYVEANLSVPANS
PNDPVTNICQAADKQLFTLVEWAKRIPHFSDLPLDDQVILLRAGWNELLIASFSHRSIAV
KDGILLATGLHVHRDSAHTAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDS
KGLSNPSEVEALRERVYASLEAYCKHKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFK
LIGDTPIDTFLMEMLEAPHQMT
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccaaaccattcttgtctctagggctcctgaaaaactcctgctcagtagcgccg
ccgtgtttgcggagccggccgggcgatgctggcagttcgctcaatggctgctccggcttc
acgggtacataccctctacaacagcgcaggatatccacagactcctctggtcagctcttg
tcgtctcctctgagctcctccatgggtcaccgaggcatcagtaaccatcctctccacccg
cccctgctcagcccgtccgccatgaactccaacctgggtcagctgcactcgcccatcaac
ggcctgccctcgccgttccccatcatcaactcgcccatgggccacccctccatgagtggc
ctggcctccactagcatgaccttcagacccagcctgagcccacagctcagttcacccatg
aatgcagtcagtagttcagaggacattaaaccccctctgggtctgaacggggtgatgaag
gtcccagcacagcccacagacacatccctctccctcactaaacacatctgtgccatttgt
ggagaccgttcatcaggtaaacactacggggtgtacagctgtgagggctgtaagggcttc
ttcaagagaacggtgagaaaggatttgacgtacacttgccgagacaacaaggactgtata
attgacaaacgccaacgcaaccgctgccagtactgtcgttatcagaagtgcttagccatg
ggaatgaagagagaagccgttcaggatgagcgacagcgagcgaaggagcggagcgagggt
gagttcggcagctgtgccaacgaggacatgcccgtggagaagattctggaagctgaactg
gcagtggaaccaaagacggaaacctacgtggaggccaacctgagtgtgcctgccaattct
cctaacgaccctgtaacaaacatctgccaagcagctgacaagcaactctttaccttagtg
gagtgggccaagcgaatacctcacttttctgatctcccgctggacgatcaagtcatcctc
ctgagagcagggtggaatgaactcctgatcgcctctttttcacatcgttctatagctgtg
aaagatgggatattattagctacaggccttcacgtccatagagacagtgcacacactgcc
ggtgtgggagccatctttgacagagtgctgacggagcttgtgtcgaagatgagagacatg
caaatggacaagactgaacttggatgcctgcgggccattgttctgttcaatccagattca
aaaggactgtctaatccatcagaggtggaggcattaagggaaagagtgtatgcatctcta
gaggcctactgtaaacacaaatatcccgatcagcctggaagatttgccaagctgttactg
cgtctgcctgccctgcgctccatcggcctgaagtgtcttgaacatctcttctttttcaag
ttaatcggagacacacccatcgacactttcctaatggaaatgctcgaagcgccacaccaa
atgacataa
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