Sinocyclocheilus grahami (golden-line barbel): 107552773
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Entry
107552773 CDS
T04918
Symbol
dhx8
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107552773 (dhx8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sgh03041
]
107552773 (dhx8)
Enzymes [BR:
sgh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107552773 (dhx8)
Spliceosome [BR:
sgh03041
]
Complex C
Other components
Step II factors
107552773 (dhx8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
S1
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
PRP38_assoc
AAA_16
T2SSE
TsaE
PhoH
Sigma54_activ_2
Flavi_DEAD
ABC_tran
Motif
Other DBs
NCBI-GeneID:
107552773
NCBI-ProteinID:
XP_016090248
UniProt:
A0A672L9M2
LinkDB
All DBs
Position
Unknown
AA seq
1200 aa
AA seq
DB search
MVEIGEDELKKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAQKNPSIDEFKTVLAKN
GADFTDSLVSNLLRLIQTMRPPAKASSSKASHAVAKSKSEKDKLKELFPALCRPDNPNTR
TMLDEDDVKVADDAMKELEMFMPSVSGTEPSSSKHRSETSSGSKKKRRSRSRSRSRDGDR
DRRRRHRSRTRSRSRSNERDRRKRRSRWHSRSRSRSPARGDRDKGSDRWKDKHVDRPPPE
EPSVGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVK
VKVLSFTGSKTSLSMKDVDQDTGEDLNPNRRRNVGGEGQEESAMRNPDRPTNLNLGHAPE
VEDDTLECKRLTKISDPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIE
LVEEEPPFLRGHTKQSMDMSPVKIVKNPDGSLSQAAMMQSALAKERREVKQAQREAEMDS
IPTGLNKHWVDPLPDTDGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQLSILE
QRESLPIYKLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTTRGKIGCTQPRR
VAAMSVAKRVSEEYGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLGQYA
IIMLDEAHERTINTDVLFGLLKKTVQKRTDMKLIVTSATLDAVKFSQYFYEAPIFTIPGR
TYPVEVLYTKEPETDYLDASLITVMQIHLTEPPGDVLVFLTGQEEIDTACEILYERMKSL
GPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFV
KQKVYNSKTGIDQLVVTPFSQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEI
QRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGSLDDEGLLTRLGRRM
AEFPLEPMLCKMLIMSVHLGCSEEMLTIVSVLSVQNVFYRPKDKQALADQKKAKFHQPEG
DHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKAT
VRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKE
YMREVTTIDPRWLVEFSPAFFKVSDPTRLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atggtagagatcggggaagacgagctcaaaaagcttgaatatttgtctttggtgtctaaa
gtttgtaccgagcttgacaaccatttaggaatcaacgataaggaccttgctgagtttgtt
atcagtcttgctcagaaaaacccaagcattgatgaatttaagacagtgctggctaaaaat
ggagccgatttcacagattcactcgtcagcaatttgcttcgtctcattcaaaccatgcgt
cctcctgcaaaagcatcttctagtaaagcctctcatgctgtggctaagtcgaagagtgaa
aaggacaagctgaaagagctgtttccagctctgtgcagacctgacaatcctaatactagg
actatgctggatgaggatgatgtgaaagttgctgatgatgccatgaaagagttggagatg
tttatgcctagtgttagtggtacagaacctagcagcagtaaacacaggtctgaaaccagc
agcggcagtaagaagaagcggaggagcagaagtcgcagtcggagcagagacggggataga
gacaggcggagacgccatcgctctcgcacccgttccagatctcgctctaatgagagagac
agaaggaagcgcaggagccgctggcactctcgcagcaggtcgaggagtcctgcacgggga
gacagagacaaaggctcagaccgctggaaggacaaacatgtggaccgcccccctccagag
gagccatctgtgggcgatatctacaatggcaaagtcaccagtattatgcagtttggctgc
tttgtgcagctggaaggactcaggaaacgctgggaaggcttggtccatatttctgagctc
aggagagaaggtcgggtagcaaatgtggcagatgtggtcagcaaaggtcaaagggtcaaa
gtcaaggtgttgtccttcactggatccaaaacaagtctcagtatgaaggacgttgaccag
gatactggtgaagatctgaaccctaacaggaggagaaatgtaggtggggaaggtcaggaa
gaatcagccatgaggaatcctgacagacctacaaacctgaacctgggccatgctccagag
gtagaggatgacacattggaatgcaaaagactcaccaagatctccgatccggagaagtgg
gaaatcaaacagatgattgctgccaatgtgttgtctaaggaggaattcccagactttgat
gaagagacaggaattctgcctaaagtagatgatgaggaagatgaggacttggagattgag
ctggtggaagaggaacctccattcctgaggggacacactaaacagagcatggacatgagt
cctgtcaagattgtcaagaaccccgatggatctctctcccaagcagccatgatgcagagt
gccctggccaaagagcgacgggaggtgaaacaggcccaacgggaggctgaaatggactca
atccccacgggcctaaacaaacactgggtggacccactgcctgacaccgacggcaggcag
atagctgccaacatgaggggcataggtatgatgcccaatgacatcccagaatggaagaaa
cacgcctttggtggcaacaaggcctcctatggaaaaaagactcaactttctatcctagag
caaagagagagtcttcccatctacaagctgaaagagcagctcattcaggctgtccatgac
aaccagatcctgattgtgattggtgagacgggctcaggaaagaccactcagatcactcag
tacctggctgaggctggatacaccacacgggggaagatcgggtgcacgcaacccagaaga
gtggcagccatgtctgtggctaaaagagtgtcagaggaatacggttgctgtttaggtcaa
gaggttggctacaccatccgttttgaggactgcacaagtcccgagactgtcattaaatac
atgacggacggtatgctgttaagagagtgtctgattgaccctgatctgggccagtatgcc
atcattatgttggatgaggcccatgagagaaccattaacacagatgtgctctttggcctg
ctcaagaagactgtacagaagcgaactgacatgaagctcattgtgacatctgctacgctg
gatgctgtgaaattctcacagtacttttatgaagcacctatttttactatccctggacgt
acatatccagtggaggttttgtacactaaagaacctgagactgattatctggatgccagt
ctgatcacagtcatgcagattcacctcactgagcctccaggtgacgtcttggtgttcctg
acgggtcaggaggagattgacactgcctgtgagatcctgtacgaacgaatgaaatccctt
ggtcctgatgtcccagaactgatcatcctcccagtctactctgccctgcccagtgaaatg
caaaccaggatctttgacccagcaccacctggaagtagaaaggtggtcattgctactaac
attgcagagacttctttgacaattgatgggatctactatgtggtggatccaggttttgtc
aagcagaaggtttataactccaaaactggcattgatcagctagtagttaccccattttcc
caggcccaggctaagcagcgagcgggcagagcaggtagaacaggccctgggaagtgctac
agactctacacagaacgtgcctacagagatgagatgctcaccaccaacgtacctgagatt
cagagaactaacttggccagcactgtactgtctctaaaggcaatgggcatcaatgacctg
ttgtcatttgatttcatggatgctccgcccatggagacgctcatcacagccatggagcag
ctgtacactctgggatcattggatgatgaaggcttgcttacacgcctcggtcgtagaatg
gccgagtttcctctggagcccatgctttgtaagatgttgatcatgtctgtccatcttggc
tgcagcgaagagatgctgaccattgtgtcagtgctttcagtacagaatgtcttctacaga
ccaaaggacaaacaagctctggcagaccagaagaaggccaagtttcaccagcctgagggg
gaccatctgactttgttggctgtctacaactcctggaagaacaacaagttttccaacccc
tggtgctatgaaaacttcatccaggcgcgatctctcaggcgtgcgcaggatatccgcaaa
cagatgctgggcatcatggacagacacaagttggatgtggtatcatgtggtaaagccaca
gtacgtgtacagaaggccatctgcagtggtttcttccgaaacgcagccaaaaaggaccct
caagaaggttacaggaccctcatagaccagcaggtggtttacatccacccctccagcgca
ttgttcaatcgccaaccggaatgggtggtgtatcatgagcttgtgctgaccaccaaggag
tacatgagggaggtgaccaccattgacccgaggtggcttgtagaattttctccagctttc
ttcaaagtctctgatcccacacgcctcagcaaacagaagaaacagcagcggttggagccc
ctttacaaccgctatgaggaaccaaatgcttggagaatatccagagccttcagacgacgc
tag
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integrated database retrieval system
