Sinocyclocheilus grahami (golden-line barbel): 107552968
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Entry
107552968 CDS
T04918
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sgh04040
]
107552968
04091 Lectins [BR:
sgh04091
]
107552968
Ion channels [BR:
sgh04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
107552968
Lectins [BR:
sgh04091
]
C-Type lectins
Others
107552968
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
Lectin_C
Ion_trans
SUEL_Lectin
GPS
Motif
Other DBs
NCBI-GeneID:
107552968
NCBI-ProteinID:
XP_016090515
LinkDB
All DBs
Position
Unknown
AA seq
2149 aa
AA seq
DB search
MDDVTTITMTKACTKRLLDKLQENIRWAQMEIKPGKSRSISIIKGRLTNDRFCIAGEPIP
TVMEKPFKSLRHWYTADLKDSKHVEQLRQETVSGLKRINGTALPGKLKQWCFQFGFLPWL
MWPIYIYKLILSHAKHLERLVSTQLRKWIGLPRCFSSIGLYGNGAISLPFSSLVEKYKCA
KTRLEMTLKEFHDPCVRDAAPTFATGRKWNPVTTVAAAKASLRHRDIVGKVQYGREGLRL
GIITPKWQKATAKEQRHLVVEEVRRQEEATRCAKAVFQAQQGCWMRWEGIEQCKITWREL
WSMETNRLSFIVRATYDVLPSPTNLQVWCGQDPACHMCAAPANLRHILVGCKTSLTQGSH
KSAPRPGSLVQLQIVIIVELTVPWEEAINEVFERKKLRYANLAAEEEEQGWTVKVFPVEV
GCRGLVASSTIRLLKELGIRGQAFESSCYEFVALQHSFLSAQAWCERGGGHLAFIQNDET
QQFLQKHLQPEQDWWIGLVSTSINLTLDTQGGLIWLDGSDVIYSNWLSESMLDTGCGYIN
TDSGFHWKTASNCSQEFYFICEFELGRSLSCMDSTILHCGLDQVIEVDESYYGRKTPHYC
RSNISSSLTASLEQCSWISVLDVVAELCNGQQFCTAVADGSSFGEPCPALGSYLLVEYHC
KDKPSSVIVERSADDGDDSFVEKDSLTLRQDTHKRAKREEPGEKWICYPDTNNPGSFTID
CPTCGSNNNREKIQLSINANCQNTHWYVEDGSKVNKNRKGNFKKDCLNKKALRLQDGQNK
NDLEIKANRIRSFKKDIIVVVFCKQSGTTYDVEKTIEYSWIKMDKNQLKNSIDNELSLLG
GADDTEEFREGLLSDICATLEEPLQQPTEVLAFASVLTKITEDKDKVNVNAQENAGCVLD
ILSKSLNSINLDNITARTEIANLLVASSSHILAAFDKDKESDISGYLLTAVDSVQTFLLT
NKTPDLEPTIITSPNVNIYVNRISPTNLQKEPFSIEDSAAGFKLPHLGSDILPVDEPVDV
KMTLFNIDPWIEGQTIHSIVAGLSLSKTNGSGIPVANLTEEIEILLPRLDTAVNSSVLDL
RNFSTLIINITTPNITLVMKFHPSEDLTLILLLGYENQPTEENNVATVTLPQQGNSQDER
YTWLLGPSDMAVDVGVYNLLIRPVVPPGVKSINASLTITSITAQCIFWEEARSNWSDYGC
RVGPKTTPNVTQCLCTHLTFFGSSFFVMPNTVDPSKSAELFSNFAQNPVVVCFIGAIFLA
YTLVAAWARRKDLQDKTKVKITMLEDNDPFAEYCYLLKISTGHRMGSSTSSRVIVTLQGT
EGECEPHHLTDPDKPVFERGAVDLFLLTTPFSLGELQSIRLWHDNSGDHPAWYVNMVMVE
DLQTEQKWHFLCSSWLAVDIDDCTVEKVFPVASEADMKGFSNLFFMKTTTDFCDGHIWYS
VVSRPPSSNFTRVQRVSCCFSVLLCSMLTSIMFYGIPTDPSEQTMDMGQIKLTWSEVMIG
IQSSFIVFPVNLVIVGIFRHSRPRKKKTKKEKEHKQSEPPQMERDIPYDPASPLFDQNNL
TVDFLIKGMSFRFFIKGPFTPNGLNGVRLSKRDCARSYYQPPPPNGLNGVRLSKRDCARS
YYQPPPPSDIEKLKRNMVKQQKARALIMEILVFLGFLWMLLLVAYGQRDENGFYLAHHIR
QSFSNGISESMNHNDVFTWANTVLLNNLFGQYPGFITDGNSKLVGGARLRQVRVKRDSCK
IAKSMSHAVPECSAPYSWENEDMGAYGPGWDELNFINGSENTITAWQYQSQSALKAVPVW
GMTALYRGGGYVMDLDSDLQNASRKLRYLFDSTWLDMYTRAVFAEFTVYNANVNLFCIVT
LILESTAVGAFEFRSVVQSVRLYQSTGGFQSFLMASQVFYFLFIVYYMFLQAKLLKRQKW
AYFKNKWNLLDLAIIILSWSSLSVFIKRTVQGDKDIEYYQNHKDQFPSFHDTAVIDATLG
YLMAFLVLLACVKLWHLLRLNPKLHLITSSLQRAWNDMSSFIVVIFIILLAYSLTCNLIF
GWKLYSYRTFPDAFKTIFSLQFGIFNYDEVLSSDPVLGALIISTCVIFITFVILTLFVSI
ILEAFGEEQENHQPSEEEEIVDLMLVKILSLFGIKCKKKEEETLPHPTR
NT seq
6450 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgtgactaccatcacaatgactaaagcatgtactaagcggctgctggataag
ctccaggaaaacatcagatgggcacaaatggagattaaacctggaaaatctcgcagcatc
tccattatcaaaggccgactcactaatgacaggttctgtatagcgggagagcccatacca
acggtcatggaaaagccctttaaaagccttagacattggtacaccgcagaccttaaagac
tcaaaacatgtggaacaactcaggcaagagacagtcagtggactcaagagaatcaatggt
acagctcttccggggaagttgaagcagtggtgctttcaatttggttttttgccatggctt
atgtggccaatttacatatacaagctcattttatctcacgccaagcacctggagagactg
gtgagtacacagttgaggaaatggattgggctaccaagatgctttagcagcatagggctg
tacggcaatggagctatctctcttcctttttcaagccttgtggagaagtacaaatgcgcc
aaaacgaggctggagatgacgcttaaagaattccacgatccctgcgtaagagatgctgct
ccaacatttgcgacagggaggaaatggaatccagttacaacagttgctgctgcaaaggca
tccctcagacaccgggatattgtggggaaagtccaatatggtagagagggacttaggttg
ggaataataacacctaaatggcaaaaggcaacagcaaaggaacagcgacacctggtggtg
gaggaggtacgccgtcaggaggaagcaactagatgcgctaaagcagtcttccaagcccaa
caaggctgctggatgaggtgggaaggtatagaacagtgcaaaatcacttggcgtgagctg
tggagcatggaaaccaacaggctaagttttatcgttagagctacatatgatgtgctgccc
tctccaacaaacttgcaggtatggtgtggacaagacccagcctgccacatgtgtgcagcc
ccggcaaacctcagacatatcctggtgggttgtaagaccagcctgacacagggaagtcac
aaatctgcacccagacctggttctctggtccaactccagatcgttataatagtcgaactg
acagtcccttgggaagaggccattaatgaggtctttgaaaggaagaagctgcgatatgcc
aacttggcagctgaagaagaggaacagggctggacagtgaaagtattcccggtggaagtg
ggctgcaggggcttagtggctagttccactataaggctgctgaaggagttgggtatcaga
ggacaggcatttgaaagctcctgctatgagtttgtggccctgcagcacagtttcctcagc
gctcaggcttggtgtgagcggggcggtgggcacctggccttcatccagaatgatgaaacc
cagcagtttctacaaaaacacctgcagccggagcaggactggtggataggactggtgtct
acctccatcaacctcactctggacacgcaaggcggcttgatctggttagatggttcagat
gtgatttactcaaactggcttagtgagtcgatgctggatactggctgtggctacatcaac
acagactctggatttcactggaagacagcaagcaactgtagtcaggaattctacttcatt
tgtgagtttgaattgggacgctctctgtcctgtatggacagcactatcctgcactgtggc
ttagatcaggtgatagaggttgatgagagctactatggcaggaagacgccacattactgc
aggagcaacatctccagctcgctcacagcttcactggagcagtgcagctggatcagtgtg
ctggatgtagtagcagagctctgtaacggacagcagttttgcacggctgtggcagatgga
tcatcttttggagagccgtgtcctgcgctgggaagttacctgttggtggaataccactgc
aaagacaaaccctcttctgttatcgtggaaagatctgcagatgatggtgacgattctttt
gttgagaaggactctttaactttgagacaggacactcacaaaagggctaaaagggaggag
ccaggtgaaaaatggatttgttatcctgatacaaataatccaggcagttttacgatcgac
tgcccaacttgtggttcaaataataatcgtgagaaaatccaactgagtataaatgctaac
tgtcaaaacacgcactggtatgtggaagatggcagtaaagtgaacaaaaaccgtaaaggc
aactttaagaaagactgcttaaacaaaaaggcactgagactacaagacggacaaaataaa
aatgatttggaaatcaaagccaacaggattagatctttcaagaaggatatcatcgtagtg
gtgttttgtaaacaaagtggcacaacttatgatgtggagaaaaccattgaatattcctgg
ataaagatggacaagaatcagctcaagaactccatcgataatgaattgagtcttcttggc
ggagcagatgacacagaagagttcagagaggggcttctttcagatatatgtgcaacttta
gaagagccactccagcagcccacagaagtgctggcctttgctagtgttttgacaaaaatc
actgaagataaggacaaagtgaatgttaatgctcaggagaatgctggttgcgtactagat
attctgagtaaatccctcaactccatcaatctggataacatcactgcacgaactgaaata
gccaacctcctcgttgcatcctctagtcacattctcgctgcgtttgataaggacaaagag
agcgacatctctggttatttgctcactgcggtggactctgtgcagacattcctgctcaca
aataaaacacctgatctggagcccaccatcatcacctctcctaatgtcaatatttacgtc
aacaggatatcgccaactaacctccagaaagagcccttcagcattgaggacagtgcagct
ggattcaagcttccgcatctgggctctgatatactgcctgttgatgagccagtggatgtg
aaaatgacactttttaacattgatccatggattgaaggtcagaccattcatagcattgtg
gccggtttgtccctctccaaaacaaacggctctggcattccagtggcaaacctcactgag
gagattgagatcttattacccaggctggacacagcggtgaacagctcagttctagatctg
agaaacttcagcactttgatcatcaatataaccacccccaacattactctggttatgaag
ttccatccttctgaagatttaacactaatattgctgctgggttatgagaaccaacccacc
gaggaaaacaatgtagccacagttacacttcctcaacaaggaaattcacaagatgaaagg
tacacatggctgctgggtcccagtgacatggcagtagacgtgggtgtttacaaccttctc
atacgacctgttgttcctccgggcgtaaagtctattaatgcatcactaacaatcacatcc
attactgctcagtgcattttctgggaagaggcgagatccaactggagtgactatggctgt
agagttggccctaaaacgacccccaacgtgacacagtgtctgtgtacccatttaaccttt
tttgggagcagtttctttgtcatgcccaatacggtagatccgtccaagtctgctgagctg
ttttccaactttgcacagaacccagtggtagtgtgctttatcggggcaattttcttagct
tacaccctggtagcggcatgggcgcgcaggaaggacctacaggacaaaaccaaggtgaag
attactatgctagaggacaatgatccctttgctgagtactgctacttgctgaagatcagc
actggtcatcgcatgggttcctccacttcatcacgggtcatagtgactcttcagggtacg
gagggagaatgtgagccccatcatctgactgaccctgataagccagtgtttgaaagagga
gctgtggacctgttcttactgaccacccccttctcactgggagagctgcagagcatcaga
ctgtggcatgacaactcaggggaccatcctgcttggtatgttaacatggtgatggtagaa
gacctgcagactgagcagaagtggcacttcctgtgcagctcgtggctggctgttgatata
gatgattgcactgttgaaaaagtgtttcctgtagcatcagaggcggacatgaaaggcttc
agcaatttattcttcatgaaaacaacaacggacttctgtgacggtcacatctggtactct
gtggtcagtcggccccccagcagtaatttcacccgtgtgcagcgtgtctcgtgctgtttc
tcagtgttgctttgctccatgttgactagtatcatgttctacgggattcccacagacccc
tcagagcagaccatggatatgggtcagatcaaactcacctggagtgaggtgatgattggc
atccagagctcctttattgtattccccgtcaacctagtaattgtgggaatcttcagacat
tcccgtccccgaaaaaagaagacaaagaaagaaaaggagcataagcagtctgagcctcct
caaatggagagagacatcccatatgatcccgcctctccactttttgatcagaacaattta
actgtagatttccttatcaaaggaatgtctttcagattcttcattaaaggcccgttcaca
ccaaatggtctcaatggagtgcggctttctaagagggactgtgcacgcagctactatcag
cctccacctcccaatggtctcaatggagtgcggctttctaagagggactgtgcacgcagc
tactatcagcctccacctcccagtgatattgagaagcttaagagaaacatggtcaaacag
cagaaagcacgagcactcatcatggagattctagtctttctggggtttttgtggatgctg
ctcttggtggcatatggtcagcgagatgaaaatggattctacctcgctcaccacatccgg
cagagcttcagcaatggcatttcagagagtatgaaccacaatgatgtgtttacctgggct
aacactgtacttcttaataacctgtttggacagtatccaggctttataacggatggaaac
tcgaaacttgttgggggcgctcgtcttcgtcaagttagggtgaagagagactcttgtaag
attgctaagtctatgagtcacgctgttcctgaatgcagtgccccttactcttgggaaaat
gaggacatgggcgcttacggtccaggctgggatgagttgaatttcattaatggctctgag
aacaccatcacagcttggcagtaccaaagccagtctgcgctcaaagcagtccctgtttgg
ggtatgactgcactttatagaggaggaggctatgttatggacctcgattctgacctgcaa
aatgctagcaggaagcttcgatatctttttgactccacctggttggatatgtacacaagg
gcagtttttgcagagttcacggtgtacaatgctaatgtcaacctcttctgcattgtcaca
ctgatactagagagcactgcagtgggtgcatttgagtttcgcagcgtggttcagagtgtc
cgtctctaccagtccacaggtggctttcaatcgtttctcatggcctctcaggtcttttat
ttcctcttcatcgtctactacatgtttttgcaggcaaagctgttgaagcggcagaaatgg
gcatatttcaaaaacaagtggaatctgttagaccttgcaatcatcattttaagttggagt
tcattatcagtgttcatcaagagaacagtgcagggagacaaagacattgaatactaccaa
aaccacaaagatcagtttcccagtttccatgacacagctgtcatagatgctacactggga
tatctcatggcttttttggttcttctggcctgtgtaaaactctggcatctgctgagactc
aaccctaaacttcacctcatcacctcttcactgcagcgggcatggaacgatatgtccagc
ttcattgtggttatcttcattatcctcttggcctattcacttacttgcaatctaatattt
ggatggaagctgtactcatacagaacttttccagatgcgttcaaaacaatcttcagtttg
cagtttggaatcttcaattacgatgaggtgctgagttctgatccggtgctcggcgctctc
atcatttccacttgcgtcatcttcattacatttgtgatcctgaccctctttgtctcaatc
atccttgaggcgttcggtgaagaacaggagaatcaccagccttctgaggaagaggaaatc
gttgacctgatgctagtgaagatcctaagtctttttggaatcaaatgtaagaagaaagaa
gaagaaactcttcctcatcctacaagatga
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integrated database retrieval system
