Sinocyclocheilus grahami (golden-line barbel): 107552978
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Entry
107552978 CDS
T04918
Name
(RefSeq) neurofascin-like
KO
K06757
neurofascin
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04514
Cell adhesion molecule (CAM) interaction
sgh04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
107552978
04517 IgSF CAM signaling
107552978
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sgh04515
]
107552978
Cell adhesion molecules [BR:
sgh04515
]
Immunoglobulin superfamily
L1 family
107552978
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Bravo_FIGEY
V-set
Ig_VEGFR-1-like_5th
Ig_PDGFR_d4
V-set_CD47
C2-set_2
Fn3_PBP1
FN3_DSCAM-DSCAML_C
BiPBP_C
Fn3_ROS1
DUF3157
Motif
Other DBs
NCBI-GeneID:
107552978
NCBI-ProteinID:
XP_016090563
LinkDB
All DBs
Position
Unknown
AA seq
1344 aa
AA seq
DB search
MWTQDRWAALAVLSIILLLSKVVAPIEVPLDPKIQEELKQPPTIVKQSLKDYIVDPRDNI
IIECEAKGKPVPTFLWRRNGKFFNVGKDPRVIMRSRSGTLEIRSSGKSEDYEGEYQCFAS
NEFGMAISNKILLRVSIIMPILQDKRVSMGLNGDLFFSNVLAKDATTDYSCTARFEFTHT
IQQKNPYTLKVLTKEPYNDTFLNSTDLYGARNVPETQPTFLSPKGLSSSKIVLRGEQLLL
ECIAAGVPTPTIDWFKRGADLPSKKVKIENFGKTLRIFNVSEEDLGDYTCMASNKIGSIR
HSVEVQVKAAPYWLDKPTNLVLAPDENGRLVCRARGNPKPTIQWLVNGEPIESSLPNPNQ
QVLGDTILFHSVQIGSSAVYQCNASNEHGYLLANAFVNILDMAPRMLGPKNQLIKVIENN
KTFLDCPFFGSPFPLLRWFKNGLGSGLDGGQYKLYHNGTLEIKQARPEDQGTYTCVASNI
LGKMENQVRLEVKEPTRIVRAPEHVTQPKGSTVRFHCRVKHDPSLPATVIWLKDDKPLSF
SWIGRFKKDEESLTIHNVNPEDGGTYTCTAKTEIDEDSASARLTVTEADISSASNRSASA
GRPDPPQDLELSDPSARSVRLTWVPGNENNSPLTHFLVQFEEDRWEPGKWQNLSIFDGNL
NSVNLQLSPFVNYQFRVIAINAVGQSQPSLPSARYQTSGAHPDVVPSGLKGWGSKKNNME
ITWQALKNTERNGPNLRYVVSWRRKDTEEEWDNITTTRMKHIIHNTDTYVPYEIKIQAVN
DFGHSPESNIVIGYSGEDKPSAAPTELRVSKINSTKVNIHWVPVDPSTVNGEFKDYKLYF
WREASLIKGLKVNKTKLHKGFFTTAEHPSGILTELFPYSKYKMYMVVANKEYEGPQSNTV
EFYTKEGEPGAPKYFRIQRHTDVVHLKWDKPLEPNGVLIGYTLQYHTVNGTQAGERKVQS
FPPNVTEYIMNLPNRFTRFKFYLAGRTQVGAGEVYAVESPHFTNEGTPDTDSTVVAVNFT
DGLMFETPPPPPPLSTDPVPTILTSEPTTPAPTTAAPPKPTTTTTTTTTTTTTTTTTTTT
TAFTTVLPVRPMSPKTVDWKMLAPNVKIWNLTVDANNDYANVSWKHNFSVDSSEFVLEFT
LDSNGSMKSIQVNHQPPIKLAGLVAGAKYRLRVYSHEHNSISSDYVTFETGRAYKEQEDI
ATQGWFIGLMCAVALLVLILLIVCFIKRSRGGKYPVREKKDLPLDAVDHKDQDGSFDYQN
ENRSLERESSDEDNKPLQGSQTSLDGNVKESDDSLVDYGEGGDGQFNEDGSFIGQYTVKK
DKEETEGNESSEATSPVNVIYSLA
NT seq
4035 nt
NT seq
+upstream
nt +downstream
nt
atgtggacgcaggaccggtgggcggcactagcagtgttgtcaataatcttgctgctgtca
aaggtggtggctccaattgaagtcccactggacccaaagatccaggaagagctgaaacag
ccccccaccattgtaaagcagtcactaaaggactacattgtggaccccagagataacatc
atcattgaatgcgaggccaaggggaaaccagtgccaacatttctgtggcggcggaatggg
aagttctttaacgtggggaaggacccgcgggtgatcatgcggagtcgttccggaacactg
gagatcagaagcagcgggaaatcggaagattatgaaggagagtaccagtgcttcgcctcc
aacgaatttggcatggcgatttccaacaaaatcctactacgagtgtcaatcattatgccc
atactacaggacaagagggtgtcaatgggcttgaacggtgacttattcttctccaatgtt
ctggccaaagatgccactactgactacagctgcaccgctcgcttcgagttcacacacacc
attcagcagaagaacccctataccctaaaagtgctaacaaaggaaccttataatgacacg
tttctcaactccactgatctgtatggtgcacgtaatgtaccagaaacccagcctaccttt
ctgtctccaaagggcttgtccagctccaagatagtgctcagaggggaacaacttcttctg
gagtgtatagcagctggagtcccaactcctaccattgattggtttaaaagaggagcagac
ctcccgtccaaaaaagtcaagattgagaatttcggtaaaactttacgcatcttcaatgtg
tccgaggaggaccttggcgactacacctgcatggccagcaacaagatcggcagtattcgc
cattccgttgaagtccaggtcaaagctgctccctattggctagataagcccaccaatctg
gtgcttgcccctgatgagaatggacgattagtttgtcgtgccagagggaaccctaaaccc
actatccaatggctggtgaatggggaacctatcgaaagttcactgccaaacccaaaccag
caagttcttggtgacaccatcctgttccattcagtccagatcggcagcagcgctgtttac
caatgtaacgcctccaatgagcatggttatctactggccaatgcttttgtcaacatcctg
gacatggcaccacggatgctaggtccaaagaaccagctgattaaagtcattgaaaacaac
aagaccttccttgactgccctttctttggctcaccgttccctttactgcgctggtttaag
aatggtctaggcagtggtctggatggtggtcagtacaagctgtaccacaacggtactttg
gagattaaacaagcccggccagaagaccaaggcacctacacttgtgttgccagtaacatt
ctgggcaagatggagaatcaggtgcgcctggaggttaaagagcccacaaggatagtgcgg
gcacctgaacatgtcacacagcccaaaggaagcacggtccgctttcattgtcgagttaaa
catgatccttcccttcctgctacggtcatatggctaaaagatgacaagcctctaagcttt
agctggattggccggttcaaaaaggatgaggagtccttgactattcacaatgtcaatcca
gaagatggaggaacctacacatgcactgccaaaactgagatagatgaggactctgcctca
gctcgccttacagttacagaggctgacatctcatctgcctcaaatcgtagtgcctctgca
ggtcgacccgacccccctcaggatcttgagctctcggacccctcagcacgtagtgttaga
ctcacctgggtgcctgggaatgaaaacaacagtcctcttacacatttcctcgtccagttt
gaagaggacaggtgggagccggggaagtggcagaacctgtctatatttgatggcaaccta
aactcagttaacctgcaactgtcaccatttgtcaactaccagttcagagtgattgcaatc
aatgctgtgggccagagtcaacccagcctcccctctgcacgctatcagactagcggagcc
catcctgatgttgtgccgagtggtcttaaaggctggggaagcaagaagaacaacatggag
atcacatggcaggcacttaagaacacagaaaggaacgggccaaacctgcgatatgtagtc
tcatggagaaggaaagacactgaggaagagtgggataacataaccacaaccagaatgaag
cacattattcataatacagacacttatgtcccgtatgagatcaaaatacaggctgtcaat
gactttggacacagcccagagtcaaacatagtcattggttattctggggaagacaaacca
tctgctgcaccaacagagctcagggtgtcgaagatcaatagcaccaaagtaaatattcac
tgggtgcctgtggaccccagcactgtgaacggagagtttaaagactacaagttgtacttc
tggcgggaggccagcctcataaagggcctgaaagtgaacaagacaaagttgcataaaggt
ttcttcaccacagcagaacatccctctggcatcctgacagagctttttccatatagcaaa
tacaagatgtacatggtggtggctaataaagaatatgaggggccacaaagcaacactgtg
gagttctacaccaaggagggagagccaggggctccaaagtactttaggattcaaaggcac
acagatgtggttcacctgaagtgggacaagcccctggagccaaatggtgtcctgattgga
tacacactccaataccatacagtgaacgggacacaggcgggagagaggaaggtccagagt
tttccacccaacgtgacagagtacatcatgaatctgcctaaccgcttcacgcggttcaag
ttctaccttgcaggtcgcacacaggtcggagcaggagaagtgtacgccgtggagtcaccg
catttcactaatgaaggcaccccagatactgactctacagttgtagccgttaactttaca
gatggcttgatgtttgaaactcctcctcctccccctcccctctctactgacccagtccca
acaatacttacctcagaaccaaccacaccagcccctacaactgctgctccacccaaacct
acaactactaccactactactactacaactaccacaactactactaccaccactactaca
acagctttcaccacggttcttcctgttcggcccatgtctcctaaaacagtggattggaaa
atgctggccccgaatgtaaaaatctggaatctgaccgtggatgctaacaatgactatgct
aacgtcagctggaagcacaacttctccgttgacagcagcgagtttgtgctagagttcaca
ctggacagtaatgggtcgatgaaaagcatacaagtaaaccaccagcctcccattaaactg
gctgggctggtggccggggccaagtatcggttgcgggtgtattcccatgagcataactcc
atcagcagcgactatgtcacgttcgagacaggcagagcctacaaggagcaggaagacatc
gctactcagggctggttcattgggctaatgtgtgccgttgctctattggttctcatcctg
ctcattgtttgtttcatcaagaggagtcgtggaggaaaatacccagtgagagaaaagaaa
gacctccccttagatgctgttgaccataaagaccaagatggttcatttgactatcagaac
gagaacaggtctcttgaaagggaaagcagtgatgaagacaacaagccattgcagggtagc
cagacgtccctggatgggaacgtaaaagagagcgacgacagtctggtggactatggtgaa
ggaggagacggccagttcaacgaggacggctctttcattggccagtacacagttaagaag
gacaaagaggagacggaaggaaacgagagctcagaagccacgtcacccgttaatgtcatc
tactctctggcatag
DBGET
integrated database retrieval system
