Sinocyclocheilus grahami (golden-line barbel): 107553192
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Entry
107553192 CDS
T04918
Name
(RefSeq) thrombospondin-2-like
KO
K04659
thrombospondin 2/3/4/5
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04145
Phagosome
sgh04510
Focal adhesion
sgh04512
ECM-receptor interaction
sgh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107553192
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107553192
09144 Cellular community - eukaryotes
04510 Focal adhesion
107553192
09142 Cell motility
04820 Cytoskeleton in muscle cells
107553192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sgh04131
]
107553192
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sgh04147
]
107553192
00536 Glycosaminoglycan binding proteins [BR:
sgh00536
]
107553192
Membrane trafficking [BR:
sgh04131
]
Endocytosis
Phagocytosis
Opsonins
107553192
Exosome [BR:
sgh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107553192
Exosomal proteins of colorectal cancer cells
107553192
Exosomal proteins of bladder cancer cells
107553192
Glycosaminoglycan binding proteins [BR:
sgh00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107553192
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
EGF_3
TSP1_ADAMTS
cEGF
EGF
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
107553192
NCBI-ProteinID:
XP_016090812
LinkDB
All DBs
Position
Unknown
AA seq
868 aa
AA seq
DB search
MKEVLGNMKNIKDKRMCWQDGRLFEDKEDWVVDSCTKCTCQESKIVCHQITCPPVSCASP
TFLDGECCPVCLPKDSEDGWSPWSEWTECTITCGTGTQQRGRSCDATSNPCSGPSIQTRR
CNLGKCDSRVRQDGGWSLWSPWSSCSVTCGEGQITRIRHCNSPVPQLGGKDCEGSGRETK
KCEAKPCPIDGAWGPWSPWAICSATCGGGTRTRTRVCNSPRPQYGGKKCPGESKDNDSCN
KQDCPVDGCLSNPCFGGVDCTSSPDGSWECGPCPVGFRGNGTFCEDVNECDMVPDLCFKN
GESLRCVNTDPGFHCLPCPPRYKGNQPFGMGVEAAKLNKQECEQENPCKDKTHNCHRSAE
CIFLGHFSDPMFKCECKIGYAGDGLICGEDSDLDGWPNQNLVCGANQSYHCKKDNCPNLP
NSGQEDFDKDGQGDACDKDDDNDGIMDEEDNCPLLYNPRQFDYDKDLVGDRCDNCPYEHN
PAQIDTDGNGEGDACSVDIDGDEVLNEHDNCPYMYNTDQKDTDMDGVGDQCDNCPLLHNP
DQTDSDNDRVGDKCDNNQDIDEDGQQNSLDNCPYIANANQADHDKDGKGDACDFDDDNDG
IPDDKDNCRLVPNKDQLDSDGDGRGDICKDDFDNDNIPDILDVCPENDAISNTDFRKFQM
VHLDPKGTTQIDPNWVVRHQGKELVQTANSDPGIAVGFDEFNAVDFSGTFYVNTDRDDDY
AGFVFGYQSSSRFYVVMWKQITQTYWEVNPSKAFGISGVSLKVVNSTTGTGEHLRNALWH
TGDTPGQARTLWHDPKNIGWKDYTAYRWHLIHRPKTGFIRVVVYEGKQIMADSGPVYDKS
FAGGRLGLFVFSQELVYFSDLKYECRDN
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggtgctggggaacatgaagaacatcaaagacaagcgcatgtgctggcaagac
ggccgtctctttgaggataaggaggactgggttgtggacagctgcactaaatgtacctgt
caggaatcaaagattgtatgccatcagatcacatgtcctccagtatcctgtgccagccca
actttcctggatggtgaatgctgtccagtgtgtctgcctaaagatagcgaggatggctgg
tctccttggtctgaatggacagagtgtaccatcacatgtggaacgggtacccagcaaaga
ggcaggtcatgtgatgccacaagtaacccctgcagtggtccctccatccaaacccgcaga
tgcaacttgggaaaatgcgacagtcgtgtccgtcaagatggtggttggagtttgtggtcc
ccctggtcgtcatgctctgtgacgtgtggagagggacagatcacgcgaattcgccactgt
aactcccccgtccctcagctgggaggaaaggactgtgagggcagcgggagagagacgaaa
aaatgtgaagccaaaccctgtccgattgatggagcctggggcccatggtctccttgggca
atctgctccgctacctgtgggggaggaacaaggacacgaacacgcgtgtgtaacagccct
cgtccacagtatggcggcaagaaatgcccaggagagtccaaggacaatgattcctgcaac
aaacaggactgccctgttgatggttgtctatctaacccgtgcttcgggggtgttgactgc
accagctcccctgacggctcgtgggagtgtgggccgtgccctgtcggtttccgtggcaat
ggaacattctgtgaggatgtgaatgagtgtgacatggtgcctgatctttgttttaaaaac
ggtgaatctctgcgctgtgtcaacacagacccaggattccactgcttgccttgccctcct
cgatacaaaggcaatcagccctttggaatgggagtggaggctgccaagctaaataaacag
gagtgtgagcaagaaaacccctgcaaagacaagactcacaactgccacaggtccgctgag
tgtatcttccttggccacttcagtgaccccatgtttaaatgcgagtgtaagatcggctat
gctggggacggcctcatctgcggcgaggactctgaccttgatggctggcccaatcagaac
ctggtgtgtggagccaaccagtcctatcactgtaaaaaggacaattgtcccaaccttcca
aactcaggccaagaggactttgacaaagatggtcaaggagacgcctgtgacaaagacgac
gataatgatggaataatggatgaggaggacaactgtcctctactgtacaatcccaggcag
tttgactacgataaagatcttgtcggtgatcgttgtgataactgtccatatgagcacaac
cccgctcagatcgacacagacggtaatggcgagggagatgcctgctctgtggacattgat
ggagatgaggttctgaatgagcatgataactgcccttacatgtacaatactgaccagaag
gacacagacatggatggagtgggtgaccagtgtgataactgtcctctgctgcacaaccct
gaccagactgactcagataatgaccgagttggtgacaagtgcgacaacaatcaggacatt
gatgaggatggccagcagaacagcctggataactgtccctacattgccaatgccaaccag
gccgaccatgacaaagatgggaaaggagatgcttgcgattttgatgacgataatgacggg
atccctgatgacaaggacaactgcagactggtgcccaacaaagatcaactagactctgat
ggggatggaagaggcgatatctgcaaagatgattttgacaatgacaacattccagacatt
ttggatgtgtgtcctgagaacgacgccatcagtaacactgacttccggaagtttcagatg
gtgcatttggaccccaaaggaactacacaaattgatcccaactgggtggtcagacatcag
ggcaaagagttggttcagactgccaattctgaccctggtattgctgtgggtttcgatgag
ttcaacgctgtggatttcagtggcactttctacgtcaacactgacagagatgacgattat
gctgggtttgtgtttggctatcagtccagcagtcgattttatgtggtaatgtggaagcag
ataactcagacgtactgggaagttaatccttcaaaagcatttggcatctctggagtttct
ctgaaagtggtcaactctaccacgggcacaggggagcacctgcgtaatgccctgtggcac
actggtgacactcctggacaggcccgcactctgtggcacgatcctaagaatatcggctgg
aaggattacactgcgtacaggtggcatctcatccacagacccaagacaggattcatcaga
gtggtggtttatgaggggaaacagatcatggcagactcggggccggtttatgataaatcc
tttgcaggagggagattaggactgttcgtgttttcccaagaactggtttacttctctgat
ctcaagtacgagtgtcgagataactga
DBGET
integrated database retrieval system
