Sinocyclocheilus grahami (golden-line barbel): 107553309
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Entry
107553309 CDS
T04918
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
107553309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sgh04121
]
107553309
Enzymes [BR:
sgh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107553309
Ubiquitin system [BR:
sgh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
107553309
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4_4
zf-B_box
zf-RING_2
zf-C3HC4
ANCHR-like_BBOX
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
Lipoprotein_6
Motif
Other DBs
NCBI-GeneID:
107553309
NCBI-ProteinID:
XP_016090986
UniProt:
A0A672M5M4
LinkDB
All DBs
Position
Unknown
AA seq
727 aa
AA seq
DB search
MAENMSLLGLEDELTCSICLCLFENPVSLICGHSFCANCLEATWNDRISSLSCPHCRLVF
PCKPELKKNTVLSAVLDAYRIKAGVSEPVKEHFEVKKKDPDAIKCDNCMEAKAVKTCLTC
MASYCEDHVRPHRENAIFRAHQLTDPLPDLMERLCSNHGKLMEFYCNQHQRCICSTCLQD
MHKGCEFITADERRFKQKTDLTDKLNILEVKTDKNQQVITQMKEQQIKLKDLAATRKRVL
ESEYRQLREMIDRDEKEAMLAIDKEQEKGQSKLVSLIKKFNENIEKMSRTKSEINILLDQ
SQSLEFLKASVDLPSVVNVEPYNPRMNVESKEVIAYHSSAVALKEWVTKLMEQPLENRIS
VLKPEFEKSVLAGLGNQFPGIPSEIPALLPKPRDICLGNQFPGIPSEIPALLPNPRDICL
GNQFPGIPSEIPALLPNPRDMWMQKAPIAWYDPSAHLRSPSPSCGPKAKASGTKQKNSSK
TAKDQKDHKERKDQKPNRSRNPSKGANPVFSKSMENLLDITVKTVDIPDINPPAISPAVL
NFVKRSDLLKYGTILNFDVRTAHKRISLSENNTKATVSDDPAHYTDIPHRFSVCSQVLCT
KGFSQGRHYWEIKMSSNNFCGLGLAYGRIDRKGPSSRLGRNADSWCVEWFNVKLSAWHNS
IETVLQNPNPSRVGILLDCDQRSATFYNVQDRAYPFHTFVFPFTEAVYPAFWIFSNGSSV
SLCKLSN
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaatatgtctctactgggtcttgaggacgagttgacatgcagtatctgttta
tgtttattcgagaacccggttagtttaatctgtggacacagtttctgcgccaactgtctc
gaagcgacatggaacgacaggatatcatctctgtcctgccctcattgccgattggtgttc
ccctgtaaacctgaactaaagaagaacaccgtcctcagcgcggtgctggacgcctataga
ataaaagcgggtgtctctgaaccagtcaaggaacattttgaggtgaaaaagaaagatcca
gatgcgatcaaatgtgataactgcatggaagccaaagccgtcaaaacttgtctgacatgt
atggcgtcttattgtgaggatcatgtcaggcctcaccgggagaatgccattttccgggcg
catcaactgactgatccgctgccagatctgatggagcgtctctgttcaaatcatggcaaa
ctgatggagttctactgcaatcagcaccagagatgcatttgcagtacctgtctgcaggac
atgcataaaggctgtgagtttatcacggcagatgagcgacgcttcaaacaaaagactgac
ctgactgacaagctcaacatccttgaggtcaaaactgacaagaatcagcaggttatcaca
cagatgaaggagcaacaaatcaaattaaaggacctagctgcaacccgcaaacgtgttctt
gagtctgaatacaggcagcttagagaaatgattgaccgagatgagaaagaagccatgctt
gctatcgataaggaacaggagaaaggtcagagcaaactggtctccttgataaagaaattt
aatgagaacatcgagaagatgagtaggaccaaatctgagatcaacattctgctggaccag
tcgcagtcactagaattcttaaaggcctctgtggatttgccctctgtggtaaatgttgag
ccctataaccctcgtatgaatgtggaaagtaaagaggtgatagcttatcattcctctgca
gttgcactgaaggagtgggtcaccaaattaatggagcagccattagaaaacagaatctct
gtacttaaaccagagtttgagaaatctgttcttgcaggtctaggaaaccaattcccagga
atcccaagtgagattcctgccctcctgccaaagccaagagacatatgtctaggaaaccaa
ttcccaggaatcccaagtgagattcctgccctcctgccaaatccaagagacatatgtcta
ggaaaccaattcccaggaatcccaagtgagattcctgccctcctgccaaatccaagagac
atgtggatgcaaaaggcaccgattgcgtggtatgacccttcagcacatttgagatctccc
agtccaagctgtggtcccaaagccaaggcttcaggaaccaaacagaaaaattccagcaag
actgctaaagatcagaaggatcacaaagagcgcaaagaccagaagccaaacagatctagg
aatccttctaaaggagcaaatcctgttttctccaaaagcatggaaaacttgcttgacatc
acagttaaaactgtagacatacctgacataaatccacctgctatttcaccagctgtgcta
aactttgttaaacgaagtgaccttcttaaatatggcactatcctcaattttgacgtcaga
acagctcacaagcggatctcgctgtctgaaaacaacaccaaagcgacagtctcggacgac
ccagctcattatacagatattccccatcgcttttctgtctgttcccaggtgctctgcaca
aagggtttctctcagggccgtcattattgggagatcaaaatgagcagtaacaacttctgc
ggattgggacttgcatacggacgaattgaccgcaagggtccctctagccgtctggggcgt
aatgcagactcctggtgtgtggagtggtttaacgtgaagctttctgcatggcacaacagc
atcgagacggtgctgcagaatcccaacccaagccgcgtgggcatcttgctggactgtgat
cagagaagtgcaacattctataatgtgcaggaccgggcctaccctttccacacatttgtc
tttcctttcactgaggctgtgtatcctgctttctggatcttctcaaatggctcttctgtc
tctttgtgcaagctcagcaattga
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integrated database retrieval system
