Sinocyclocheilus grahami (golden-line barbel): 107553532
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Entry
107553532 CDS
T04918
Name
(RefSeq) excitatory amino acid transporter 1-like
KO
K05617
solute carrier family 1 (high affinity glutamate/aspartate transporter), member 6
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
107553532
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sgh02000
]
107553532
Transporters [BR:
sgh02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
107553532
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SDF
DUF4004
Motif
Other DBs
NCBI-GeneID:
107553532
NCBI-ProteinID:
XP_016091280
LinkDB
All DBs
Position
Unknown
AA seq
560 aa
AA seq
DB search
MNEKPPNSTSLFLSEDSEKPQRSEEGLHRLCRVLQKQMSGSRRKMGGITRDSVKTFLRRN
TFVIFTVAAVALGVVLGFALRPCNLSSREVKYFSFPGELLMRMLQMLVLPLIVSSLVTGI
SSLDSKASGKMGIRAIVYYMVTTFIAVFIGIVMVIIIRPGKGSRDSPVASSGSIEPVQAA
DAFLDLIRNMFPPNLVEACFKQYKTLYKKIVLTKNVTIMVNATDNFNSTDLIQVSNLSTI
LQTIQETVEEVVPVSGSSNGVNALGLVVFSMCFGLVIGNMKQQGQALRDFFDCLNEAIMR
LVAIIIWYAPVGILFLIAGKIVEMKDLAQVGGQLGMYTVSVIVGLLIHGLFVLPLLFFVV
TKKNPFTFIAGLLQALITALGTSSSSATLPITFRCLEENNHVDKRVTRFVLPVGATINMD
GTALYEAVAAIFIAQVNDMDLNFGQILTISITATAASIGAAGIPQAGLVTMVIVLTSVGL
PTEDITLIIAVDWFLDRLRTTTNVLGDSFGAGIVEHLSRQELQNQDVEISNSVIEENEKP
YQLICQENDSLKHRNSETTM
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagaagcctccaaacagcactagtctgtttctgagtgaagactctgagaagcca
cagcgcagtgaggaggggctccaccgtctgtgccgagtgttacagaagcagatgtcagga
agcagacgaaagatgggcggcatcacacgagacagcgtcaagacgttcctgcggaggaac
acctttgtgatcttcacagtggctgctgtggctttaggggtggtgttgggtttcgccctg
agaccttgtaacctgtccagcagggaggtgaagtatttctctttccctggagagctgctg
atgaggatgcttcaaatgctcgttctaccactcatcgtctccagcctcgtcacaggaatc
tcctctttagacagcaaggcctctgggaagatgggaattcgggccatcgtctactacatg
gtgaccacttttatagcagttttcatcgggattgtaatggtgattattatcaggccgggt
aaaggcagcagggatagtccagtggcctctagtggcagcattgagccagtgcaggccgct
gatgcttttctggacctgataagaaatatgtttccaccaaatttagttgaggcctgcttc
aaacagtacaaaacattatacaagaaaatcgtgttgaccaaaaatgtcaccatcatggtc
aatgcgacagacaacttcaactctacagatctcatccaagtgtccaacctcagcacaatc
ctgcagaccatccaggagacggtggaagaggtggtgcctgtgtcaggatcctcgaatggg
gtgaacgcattggggttggtggtcttctccatgtgctttggattagtgattggaaacatg
aaacagcagggtcaggctctccgggacttctttgactgcctgaatgaagccataatgcgc
ttggtagccatcattatctggtatgctccggtgggaatcctcttcctgattgcagggaag
atcgttgagatgaaggatcttgctcaggtgggcggacagttggggatgtacacggtttct
gtcattgttgggttgctcatccacggcctgttcgttctgcctctgctcttctttgtggtg
accaagaagaaccctttcaccttcatcgctgggctgctgcaggctctgatcacagctcta
ggcacctcatccagctctgccaccctgcccatcactttccgttgtcttgaagaaaacaac
catgtggacaaacgagtgacacgttttgtgctgccagttggagccacaatcaatatggat
ggcactgctctgtacgaggcagtggcggccatttttattgcccaggtcaatgacatggac
ctgaactttgggcagatcctcaccatcagcattacagcgaccgccgctagcatcggagca
gcaggcatccctcaggctgggctggttaccatggtgatagtattgacatcggtgggactg
cctacggaggacattacactgatcatcgcggtggactggttcctggatcgactcaggacc
accaccaacgtgctgggagactcatttggcgctggaatcgttgagcatctgtcacgacaa
gaactccagaaccaggatgtggaaatcagtaactctgtgattgaggagaatgaaaagccg
taccagctgatctgtcaggagaacgactctctcaaacatcgcaacagtgaaaccaccatg
taa
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