Sinocyclocheilus grahami (golden-line barbel): 107554337
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Entry
107554337 CDS
T04918
Name
(RefSeq) glutamate receptor ionotropic, kainate 5-like
KO
K05205
glutamate receptor, ionotropic kainate 5
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04080
Neuroactive ligand-receptor interaction
sgh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107554337
04082 Neuroactive ligand signaling
107554337
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sgh04040
]
107554337
Ion channels [BR:
sgh04040
]
Ligand-gated channels
Glutamate (ionotropic)
107554337
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan-Glu_bd
Lig_chan
ANF_receptor
SBP_bac_3
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
107554337
NCBI-ProteinID:
XP_016092306
LinkDB
All DBs
Position
Unknown
AA seq
961 aa
AA seq
DB search
MPALPALLLSIHLLVLLLLLLLLTMAPSSHSQVPALSAVRMAAILDDQSACGRGERLALA
LARENINSVMEGPSRARVEVDIFELQRDSQYETTDTSLLRLEELVRHFLISRETLSVRML
DENLDPTPLLKEIRDDKVATIIIDANASVSILILKKASELGMMSAFYKYILTTMDFPLLR
LDDVVDDQSNIIGFSMLNSSHPFYLEFIRSLNLSWREGCDLSPYPGPALSSALMFDAVHV
VVGAVRELNRSQEIGVKPLSCTSSLIWQHGTSLMNYLRMIEYDGLTGRVEFNSKGQRTNY
TLRILEKFKGGHKEIGVWYSNNTLAMNSTSLDINASETLANKTLIVTTILEDPYVKRKAH
YQDFRGNDQYEGFCVDMLRELADILKFSFRIKLVDDRLYGAPEPNGSWTGMVGELINRKA
DLAVAGFTITSEREKVIDFSKPFMNLGISILYRVHIGRKPGYFSFLDPFSPAVWLFMLLA
YLAVSCVLFLAARLSPYEWYNPFPCWRDRSDLLENQYTLGNSLWFPIGGFMQQGSEIMPR
ALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESADDLADQTNIQYGTIQGGS
TMTFFMNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSKYAFLLESTMNEYHRRLN
CNLTQIGGLLDTKGYGIGMPLGSPFRDEITLGILQLQENNRLEVLKRRWWEGGKCPKEED
HRAKGLAIMEFVWSTRRSAETDEVRLHSCPIRNHRHSRVSVCQEMMTEFRNVISCKKNTR
LRRRRPLSSQGILRPPARLPLGAPRQMRLVREMRLSNGKLYSGTGPLTGAAAGPGPGGGA
AEMGPGPQRLLEDPLSASVPSSAPALVPTAAPRGCTHVRVCQECRRIQSLRSMPSCSRIS
PLASATSSLPRLPPPPPSASNTNTDSEEGGSGSPRRAKPTPPPRPLPPTKTPSTDLLCKQ
D
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgccggctctgccagcgctgctgctgtcgattcacctcctcgtcctcctcctgctgttg
cttctgctgaccatggccccgtcctctcacagccaggtgcccgctctctcagccgtcagg
atggctgctattttagatgatcagtcagcgtgtggacgtggagagcggttggcattggct
ctggcccgagaaaacatcaacagtgtgatggagggcccgtcacgagcccgcgtggaggtc
gacatctttgagctgcagagagactctcaatatgagactacagacacaagcctgctgcga
ttggaggagcttgtgcgtcacttccttatatcccgggaaacactctcagtcagaatgctt
gatgaaaatttggaccccacccccctgctgaaggaaatccgtgacgacaaagttgcgact
attatcattgatgccaatgcatcagtgtcaatactaatattaaagaaggcctcagaatta
ggcatgatgtcagccttctacaagtacatcctcaccacaatggatttccctctgttgagg
ttggatgatgtggtagatgatcagtcaaatatcattggcttctccatgttgaacagcagt
catcctttctacctagagttcatcaggagtctaaatctgtcatggagggaaggttgtgac
ctcagcccctaccctggtccagcgttgtcatctgcactgatgttcgacgcagtgcatgtg
gtggtcggagcggtgcgagaactgaaccgcagtcaggagatcggagtgaagcctctgagt
tgcacgtcttcactcatctggcagcacggcacaagtctcatgaactatctgcgcatgata
gagtatgatggcctaacaggccgcgtggagtttaacagcaaaggccagaggaccaattac
acgctgcgtattcttgagaaattcaaggggggtcacaaagagatcggtgtctggtactcc
aataacacgttggctatgaactccacgtctttagacatcaacgcatctgagactttagct
aacaagacgctcatcgtcaccacgatactggaagatccatatgtgaagcgcaaggcgcac
taccaggacttccggggtaacgatcagtacgagggattctgtgtggatatgctgcgggag
ctggcagacattctgaagttttccttccggatcaagctggtggatgacaggctgtatgga
gctccagaacctaatggctcatggactggcatggtgggggaactcatcaacaggaaagca
gatctggcagtggctggatttaccatcacatcggagagggagaaggtcatcgatttctcc
aaacctttcatgaaccttggcatcagtatcctgtaccgcgtccacataggcaggaagcca
ggttatttctccttcttggatcccttttcgccagctgtctggctattcatgcttttagcc
tatctggccgttagctgtgtgctcttcctggctgccagactgagtccgtacgagtggtac
aatcccttcccgtgttggcgggaccgcagcgacctgctggagaatcagtacacactgggg
aacagcctgtggtttccaatcggtggtttcatgcagcagggctcagagatcatgccccgg
gctctgtccacacgctgtgtcagcggcgtttggtgggcattcacactgatcatcatttcc
tcctacacggcgaaccttgcagcttttctgacggtccagaggatggaggtgccaatcgaa
tctgctgacgacttggccgatcagacaaacatccagtatgggactattcaaggaggaagt
actatgaccttcttcatgaactcgcgctaccagacgtaccagcgcatgtggaattacatg
tactccaagcagcccagtgtgttcgtgaagagcacggaggagggcatagctcgggtttta
aactccaagtacgcctttcttctggaaagcaccatgaacgagtaccaccgacgcctcaac
tgcaacctcacgcagattggaggcctgttagacaccaagggctacggcatcggcatgcct
ctgggttcaccattcagagatgagatcacattaggcatactgcagctgcaagaaaacaac
agattagaagtcctaaagcgtcgatggtgggagggcggaaagtgtcctaaagaagaagac
catcgagccaaaggtctagccattatggagtttgtgtggtccacgcgccgctcggccgag
acagatgaggtacgccttcactcctgccccatccgaaaccacagacactcacgagtgtca
gtatgtcaggagatgatgactgaattcagaaacgttatctcctgtaaaaagaacactcgt
ttgcggcgccggcgacccctctcgtcccagggcatcctccggcccccggcccgtctccct
ttaggagctccccgtcaaatgcgccttgtgcgggagatgcgtctcagcaacggcaaactc
tacagcgggacaggaccattaactggcgctgcagcaggaccgggacctggtgggggcgct
gcggaaatgggcccaggccctcagcgactgctggaggatcctctcagcgccagtgtcccc
agtagcgcacccgctctggtccccacggcggcgccccgcggctgcacccacgtgcgagtg
tgccaggagtgccggcggatccagagccttcgctccatgccatcttgctcacgcatctcg
ccactggcctccgccacgtcctctctcccacgtttgccaccgccgcccccctccgcctcc
aatacaaacactgacagcgaggaaggaggctcgggcagcccacgcagggccaaacccacg
ccccctccaaggccgctgccgcccactaaaactccctctaccgatctcctctgcaagcag
gactga
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