Sinocyclocheilus grahami (golden-line barbel): 107554432
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Entry
107554432 CDS
T04918
Symbol
hnf1a
Name
(RefSeq) hepatocyte nuclear factor 1-alpha isoform X1
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgh03000
]
107554432 (hnf1a)
Transcription factors [BR:
sgh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
107554432 (hnf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
HTH_5
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
107554432
NCBI-ProteinID:
XP_016092417
LinkDB
All DBs
Position
Unknown
AA seq
575 aa
AA seq
DB search
MEGGEGRRAGGERSSRLSALQEQLVWSLLGSGLSKELLIQAMGDLERERTSAGAERMDRA
DGESSEEGDMDNPPLIFRELERLPPEEAARQRAEVDQLLQEDSWHVAKMMKTYMQQHNLP
QREVVESTGLNQSHLSQHLNKGTPMKNQKRAALYSWYVKKQAEINQQFTNASRGVMSGEE
SGDDVRKGRRNRFKWGPASQQILFQAYERQKNPSKEEREGLVEECNSFRAECLQRGVPPS
QLAGLGYNLVTEVRVYNWFANRRKEEAFRHKLALDVPYSSQSAPLTGQMLPSSPLTVLKY
SQPVVCESLGTVRSSGGEDRGHLASPVQLEPSHTLLDTHHHKSASGGGSLPPVSTLTSLH
GVSGSSATPPGLIMPSVMSLGDSSLFIGLTSSQPQTVINNVGGGFTTLQPISFQQQLHTS
AQQPIVQQLQSHIGPSSFMATMAQLPCHMYSKADLSSYPSSSLLSQAMVIADSNSIGTLT
NLTALRQQFKAKQYLRNSRQLFSPQIFTSDPEGHAETPIEEESLHLQSTSPEPVSSGSLD
LYPQTQTNETHPSHLLSSPPGDIDPYITQMVSTAQ
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggagggaggagaggggaggagagcaggaggagaacgaagcagccggctgtcggcctta
caggagcagctggtgtggtctctgctgggatcagggctgtcaaaagagctgctgatccag
gccatgggagatctggagcgagaacggacctcagccggtgccgagaggatggaccgggcc
gatggcgagagctcggaggagggagacatggacaatccacctcttatattccgtgagctg
gagaggctgccgccggaggaggccgcgaggcagagggctgaagttgaccagctgttacaa
gaggattcttggcatgtggctaaaatgatgaagacctacatgcagcagcacaacctacca
cagagagaggtggtggagtccaccggcctcaaccaatcccatctctcccagcacctcaac
aagggcacacccatgaagaatcaaaagcgtgccgctctgtacagctggtacgtcaagaaa
caggcagagatcaaccagcagttcaccaatgccagtcgaggtgtcatgtcaggagaggaa
tccggggatgatgtgagaaagggacgaaggaatcgattcaaatggggcccagcgtcccaa
caaatcctgttccaggcctatgaacgacagaaaaaccccagtaaggaggaaagggaggga
ctggtggaggagtgcaacagttttagagcggagtgtcttcagaggggagttcctccatct
cagctggctggcctgggttataatttggtcacagaggttcgtgtatataattggttcgcg
aatcggcgtaaagaggaggcatttcgccacaaactggcactggacgtgccctacagcagc
caatcagctcccttgacaggccagatgctaccatccagtcctttaacagttctgaagtac
agtcagccagtggtgtgtgagagtctgggcacagtgagaagctccggtggtgaagacaga
ggtcatctagccagtccagtccagctagaacccagtcatacactcctggatacacaccat
cacaaatcagcatctggcggtggctccttacctcctgttagtactctcacttccttgcat
ggagtgtcaggatcctctgctactcctccaggactgatcatgccaagtgttatgagtctg
ggggactcctcacttttcataggcttgacgtcctctcaaccacagacggtcatcaacaat
gtagggggaggttttactacccttcagccaatctcatttcagcagcagcttcacacttca
gctcagcagccaatagtgcagcagcttcagagtcatattggtccaagctccttcatggca
acaatggctcagttaccatgccacatgtacagcaaagcagacctgagctcttacccctcc
tccagtcttctgtcccaggctatggtcatcgcagacagcaacagcattgggacactgact
aacctcacagctcttcgacagcaattcaaagcaaaacagtatttgaggaattcaagacaa
ctcttcagtcctcagattttcacctcagatcctgagggtcatgctgaaactcctattgaa
gaggagtctttacatctgcagtccacttcaccagagccagtgtcttccggcagtttggat
ctctaccctcagacacagacgaatgaaacccatccttctcacctgctctcctctccaccc
ggagatatagacccttacatcacacagatggtctctactgcacaatag
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