Sinocyclocheilus grahami (golden-line barbel): 107555285
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Entry
107555285 CDS
T04918
Name
(RefSeq) AT-rich interactive domain-containing protein 1B-like
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107555285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgh03000
]
107555285
03021 Transcription machinery [BR:
sgh03021
]
107555285
03036 Chromosome and associated proteins [BR:
sgh03036
]
107555285
Transcription factors [BR:
sgh03000
]
Eukaryotic type
Helix-turn-helix
ARID
107555285
Transcription machinery [BR:
sgh03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107555285
Chromosome and associated proteins [BR:
sgh03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107555285
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
Motif
Other DBs
NCBI-GeneID:
107555285
NCBI-ProteinID:
XP_016093525
LinkDB
All DBs
Position
Unknown
AA seq
1969 aa
AA seq
DB search
METGLVANHQVRNVGSGDPPPSPHHRTPPQQQPQHQQRAVHLHNNNISPTPARGDPGSRQ
HGGKESALETQVGRHPRLLNTSDEEERSSKTGGDRMGSRYEHSNFGPTSNHNNNNNNSGG
SASQSGNSSVSEFNHYYGNGRGGPCFDQHGGQQSPRTALMHQAQGNMDQVQNSHEGYHNN
PYNHYPNYRPGYGGAGYGMMSPSRQGNMMGPGNNSPTAAAAIHGKAAMASTNVTPAPGAN
VGCFQRFPGQNQLHPSGATPTLNQLLTSPSPMMRGYGSGYQDYSTPQQQSGMGLGKDLSS
PYSHGWGAQHRNHPALSPGNNGNSRAQVAAMDPMALKRSQMYVMGNSPYSQAGGTYPGQP
YGSPAPQRYPIGMQGRGQVGMGGMQYPQQQQMPAQYGPQGMGGYSQQGQPPYFSPPQQQS
AAPSQPPYMQQRAPTQQETLQEGYVSRGQSGKSNHDDMGLTQQDRPSSLPDLSGSIDDLP
TGTEAGLSSAVSASGSTSSQGEQSNPAQSPFSPHASPRVPSMRSGPSPSPVGSPVGSSQS
RSGPISPASGPGTQMAPQTTGNVPDVGSHSTHSQSPMSQERGFAPNMQRNVPGPQFVGQQ
PGPSMSPHSCPTGPMHHSVGSYQLSPSYGPQSGQYGPSGNYPRPSNYGGAPGANYSGPGP
GNSLGMNASSPMHGQGPGQPCGSMTTARGPGHAAGGRPYPAGSSSVAPTSPNMPQSAGPG
MGPPPPNVSRKPQESGPTSAQQNPVPSGQPRPPFGRSPVYLGLAGPGGRPASFPIPHPHH
PHYSSGQGQGQPHAELYGPGGYQAGPHMLGMGPGGPYNHPPSNSAARMTPQGPSYNTMPT
GPVTGSGNSMMPTNPKLRAEHKEEGSTPTTEPPKPKSTSANSGSLQGPQTPQSTGSSTMT
EMPGDLKPPTPATTPHGQVTPQPTGRNSGVSVQDPFSESSDPAFQKRGPMHGGGSVDATS
RMAFDTSKDPYGAARKGGSEPFMPGQMPGSSMQDMYPRGPPSGMGMGPRPQYSYNPGFER
RPEHVMGPEGGIGPPGNQNNMVLSNSDPSMFSGSRYVSHQRHGHEGYGQQYPHSMPYGAH
GMYAQQQGYKRPGEGMYGPPAKRHESETYSMQYGGQQPDMYSQYGYPERRPMQSPFPYPY
GRDRMQPGGQGPSQHSMMSGGPPPSSNSSGGPQGNMWHTRHDMSYPYPGRQGHGPPYTSM
SRGDDPEVRASLDNQWPGQRQSPYPPHSSSSASSMPPMASRQPPSSYQSPPAMPNHISRV
PSPAPFPRSVGGSMSPNKAHMMASMKQMQKPGGPGSMPSSQTGGHPGQGFPAIHREVTYP
LDSVEGTQPQLKPRRRLTSKEIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNTVP
SFGLSQLPGFLELIVEYFRRCLIEIFGILEEYEVGTEGQKTLLGPCSEPTEKKQPSNQDL
KSQSNTEQVERLDVEPEKPQPSSSAAALNMEKREDSAESKADEKNTGKEPCPPVEPRPKQ
ASKYDKLPVKVEEREAVADCVEDRSELLGLAGEFTSGLLHWKAGGGDSTAHIQTHFERRR
EEEQKPSENQEGVQAPGKETVEEEHGREEELKRELPGPSEETLTATVDDMLSSRPGSLSE
GETQTFPFRSREKQSGITLLEDEPRCWDEAPLSVAEGWQDELAKRCICVSNIIRGLSFVP
GNDSELARHPGLVLILGKLVLLHHEHPKRKRMPPTYQREEERGLACSKDEWWWDCLGALR
ENTLVTLANISGQLDLSIYPESICLPILDGLLHWMVCPSAEAQDPFCTANGFSSLTPQRL
VLECLCKLSIQDSNVDLLLATPPFSRQERLFATLVRHVGERKSQVCREMAVAILSNLAQG
DPTAARAIALQKGSVGALINFLEDSVAMAQYQQSPHSLLHMGHATHPEPPSINMMCRAAK
ALLAMAQVEENRPEFVLYESRLLDISLSSVLNSGVAVILCEVLFKLGRS
NT seq
5910 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgggtctggtcgcgaatcatcaagtgagaaatgttggaagcggagatccccct
ccttcgcctcatcatcgcacgcctccacagcaacagccacagcaccagcagcgagccgtg
cacctccacaacaacaacatcagcccgacacccgcgcgcggagatccggggagccggcag
catggagggaaagagagcgctctggagacgcaggtcggtcgccatccgcgtttgctgaac
acaagcgacgaggaggagcgctcgtccaaaaccgggggggatcggatgggcagcaggtac
gagcactccaacttcggaccaacgagcaaccacaacaacaacaacaacaacagcggcggc
agcgcgtcccaaagcgggaacagctccgtttctgagtttaatcattattacgggaatgga
agaggagggccttgctttgatcaacatggcggacaacaaagccctaggacggctttaatg
catcaagcacagggcaacatggatcaagtgcaaaactcccacgaagggtaccataataat
ccgtacaaccactatcccaactaccggccggggtacggtggcgctggatacggtatgatg
agcccgtcgcggcaggggaacatgatgggcccaggtaacaattcgcctaccgccgctgct
gctattcatggcaaggctgctatggcctctactaacgttaccccagctcccggtgccaat
gttgggtgctttcagaggttccccggacaaaaccaactgcacccttctggagctacaccc
accctaaaccagctcctgacatctccgagtccgatgatgcgcggatatggcagcggctat
caagactacagcaccccgcagcagcagtccggcatgggtctgggcaaagacctgagctcc
ccgtacagccacggctggggagcacaacacagaaaccacccggccttgagccctgggaat
aacgggaacagcagagctcaggtggcggctatggaccctatggccttgaagcgttctcag
atgtatgtgatgggcaacagtccctactctcaggcaggtggaacttatccgggacagcca
tatggatcacccgctcctcagcgatacccaataggaatgcaggggcgtggccaagtgggc
atgggagggatgcagtaccctcagcaacagcagatgccggctcagtacgggccacaagga
atgggcggctactctcaacagggtcagcccccatacttcagtcctccacagcagcagtct
gcggccccctctcaacccccctacatgcagcagcgtgctccaacacaacaggagactctg
caggagggatatgtaagcaggggccagtctgggaaatcgaaccacgatgacatgggtctt
actcagcaggaccgcccgtccagccttccggatctgtccggctctatagatgacctcccc
acaggaacagaggcgggtctcagttcggccgtcagcgcttcgggttctaccagtagccag
ggcgagcagagtaaccccgcccagtcacccttctcaccccacgcctcgccccgagtcccc
agcatgcgcagcgggccctcgccctcaccggttggatcacctgtgggttccagccaatca
cgttctgggcccatatcacctgccagtgggccaggtacacagatggcccctcagaccaca
gggaatgttccagacgtgggctcccattccactcacagtcagtcgcccatgtctcaggag
agaggatttgcacctaacatgcagcgcaatgtacctggtccccagtttgtaggccagcag
ccgggaccttctatgtctccacactcctgtcccactggccctatgcaccatagtgtgggc
tcctatcagctgagcccctcttatgggccccagagtggccagtatggtccttcaggtaac
tacccacgcccttctaactatggcggagcaccaggtgccaactacagtggccccggccca
ggcaacagtcttggcatgaatgccagcagtccaatgcacgggcagggtccagggcaaccc
tgtggctctatgaccacggctcgaggaccagggcatgcagctggcggccggccgtaccca
gcaggctccagcagtgtggctccaacgtctcccaacatgcctcagtctgctggccctggg
atgggtccacctcctcccaacgtcagtcgcaagccccaagagagtggccctacatctgcc
cagcagaacccagtcccctctggacagcccaggcctccctttggcaggtcccctgtatac
ctcggcctggctgggcccgggggacggccagcctccttccctatccctcacccccatcac
cctcactacagttctgggcaaggccaggggcagcctcatgctgagctgtatgggccaggc
gggtatcaggctgggccccacatgcttgggatgggtcctggaggcccctacaaccatcca
ccaagcaacagcgcagccaggatgacccctcaaggaccgtcctacaacacaatgcccaca
ggacccgtgacaggctcaggcaacagcatgatgcccaccaatcccaaactgagagctgag
cacaaggaggagggcagcacacccaccacagagcctcctaagccaaagtctacgagtgca
aactcaggctctcttcaagggccgcagactcctcaatctacaggcagcagcactatgaca
gagatgccaggagacctaaagccaccaacaccagctaccacaccccacggacaagtgacc
cctcagccaactggcagaaacagtggtgttagtgtacaagatccattctctgaaagcagc
gacccagcctttcaaaagcgaggccccatgcatggaggaggcagtgtagatgccacctct
agaatggcgtttgacaccagtaaggatccctatggagctgccaggaaaggtggctctgag
ccctttatgccagggcagatgccaggcagcagcatgcaggatatgtatccacgtggaccg
ccctcaggcatgggtatgggcccacgaccccagtactcctacaaccctggttttgagagg
aggccagagcatgtcatgggtccagaggggggaattggcccccctggaaatcagaacaac
atggtgctttccaacagtgatcccagcatgttctcaggcagtagatacgtctctcatcag
agacatggacatgaaggctatgggcagcagtaccctcacagtatgccatatggcgcacat
gggatgtatgcccaacagcagggttataagcggcctggggaagggatgtatggccctcct
gctaagcgccatgagagtgaaacctatagtatgcagtacggtggccagcagcctgacatg
tatagccaatatggttacccagagcgtaggcccatgcaaagcccgttcccctatccatat
ggacgcgatcgcatgcagccaggtgggcagggaccttctcagcacagcatgatgagtggt
ggaccacccccatcctccaactccagtggtgggcctcaggggaacatgtggcacaccagg
catgacatgagttacccttaccccggccggcagggtcatgggcccccctacacctccatg
agccgtggagatgatccagaagtcagggccagtctggacaatcagtggcctggtcagcgt
caatccccctacccaccacactcttcgtcctccgccagctccatgccccccatggctagc
cggcaaccaccttcttcctaccagtctcctccagcaatgccaaaccatatctctcgagtc
ccgagccctgcaccattccctcggtctgtgggtggctctatgtcacccaataaggctcat
atgatggcctctatgaagcagatgcaaaagccgggtggcccagggtccatgccaagctct
caaactggtggtcatcctgggcaaggcttcccagcaatccatcgggaggtcacttaccca
ttagactctgtggagggaacgcagcctcagcttaaaccccgacgaaggttaacatccaaa
gaaattggcacaccagaggcttggcgtgtaatgatgtccctgaagtctggtttgcttgct
gagagcacatgggccctagacacaataaacatcttgctatatgatgacaacacagtgcct
tcctttggcttatctcagttgcctggtttcttggagctcattgttgaatatttcagaagg
tgcttaatagagatctttgggatcctcgaggaatatgaagtcggaacagagggtcagaaa
actcttcttggtccatgttcggaacccacagaaaaaaagcaaccttccaatcaagaccta
aaaagccaatccaatacagaacaggtggagagattagatgtggagcctgagaaacctcaa
cccagcagctcagcagcagcacttaatatggagaaaagggaagactctgcagaaagtaag
gccgacgaaaagaacactggtaaagaaccatgtcctccagtggagcccagacccaagcaa
gccagtaagtatgacaaactcccagtgaaagttgaggagagagaggctgtggctgattgt
gtggaggatcgatcagagctgctaggcctggccggggagttcaccagtgggcttctgcat
tggaaggcaggtggaggggactctactgcccacatccagacccatttcgagagacgtagg
gaagaagaacagaagccttcagagaatcaggaaggtgtacaggctcctggaaaagaaacg
gttgaagaggagcacgggagggaagaggaactgaagagagaacttccagggccctcagag
gaaaccttgacagccactgtggatgacatgctaagttctcgtccagggtccctatcagag
ggcgaaactcagacattccccttccgcagcagagagaaacagagtggcattactttgctg
gaagatgagccccgatgctgggatgaagcacctctttcagtagccgagggctggcaagat
gagttggccaagcgctgcatctgtgtgtccaatatcattcgtggactctcctttgtcccg
ggcaatgacagcgaattggctcggcacccaggtttagtgctcattcttggaaaacttgtg
cttttgcaccatgagcaccctaaaagaaaaaggatgccacctacctaccagcgagaggaa
gagcgaggtctggcttgcagcaaggatgaatggtggtgggactgccttggtgccttgcgt
gagaacaccttggtcacccttgccaacatttcaggacagctagacctgtctatctatcca
gaaagtatctgccttccaattctggatgggcttctccactggatggtgtgcccttcggcg
gaggcccaggaccctttttgcacggcaaatggcttctcctcgctcacaccgcagaggctg
gtgctggagtgtctgtgcaaactgagcatccaagactctaatgttgaccttctgctggcc
acacccccttttagcagacaggagcgcctctttgccacattagtgaggcatgttggtgag
cgaaagagtcaggtgtgccgtgagatggcagtagccattctctccaatcttgcacagggt
gacccaacagctgcccgagccattgccctgcagaagggcagtgtgggagccttgataaat
ttcctagaggacagtgttgccatggcacagtatcagcagagccctcacagtctcttgcac
atgggacatgccacccatcccgagccgcccagcatcaacatgatgtgccgggccgccaaa
gccctgctggccatggcccaagtggaggagaacaggcctgagtttgtgctctacgagagc
aggcttcttgatatctcgctgtcctccgtgctgaactctggtgtggcggtcatcctgtgt
gaggtactgtttaagctcggccgctcgtga
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integrated database retrieval system
