Sinocyclocheilus grahami (golden-line barbel): 107555510
Help
Entry
107555510 CDS
T04918
Name
(RefSeq) DEP domain-containing protein 5-like
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
107555510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sgh04131
]
107555510
Membrane trafficking [BR:
sgh04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
107555510
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Motif
Other DBs
NCBI-GeneID:
107555510
NCBI-ProteinID:
XP_016093818
LinkDB
All DBs
Position
Unknown
AA seq
1547 aa
AA seq
DB search
LSPLLLQVKSLKEDLQKETISVDQTVAQAFKLRAYQDVIINIVDPKDVTLDLVELTFKDQ
YIGRGDMWRLKKSLVSTCAYVTQKVEFAGIRAQASELWVKGEKVTCGYISEDSRVVFRST
SAMVYIFIQMSCEMWDFDIYGDLYFEKAVNGFLSDLFAKWKEKNCSHEVTVVLFSRTFYS
AKSLEEFPEIQRASVRQDHEGRYYEDFYRVVAQNERRDEWMSLLITIKKLFIQYPVLVRL
KGADEFLCGNNSTAAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDR
LLMILTKQRMIDNGIGVDLVCMGEQPLHAVPLFKLHNRTVHGDSRIGDDYNLPHWINHSF
YTSKSQNSCSCFTPRIKLAGKKAHAEKAKSNKEHSLGAPKDAENSLPIQVDYDAYDAQVF
RLPGPSRSQRSTNFRSSRERESASRKSWGSTDVGGGVVGSSPPTRPTGPEEQRSLASDDS
LSHISNILLIPRPAQGQYEISSSLGYTSCTRELLEKMVESQRDSSAPGRFTVGSAESTLH
IRPGGYTPQRALINPFAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAELQV
SEQRDPARTSAELLELAYHEATGSKRTASRHAGENGLYITGVPDNVSGSPASSNSTGTSV
NRGSFEDYSSPDPMPSFCCTVGVDWKSLTTPACLPLTTDYFPDRQTLQNDYTEGCYDLLP
HTDLERRDDESPVMTAHQVFEEFICQRLMQGYQIIVQPNRKPQPAIAPPLSSSPLYSRGL
VSRRKPEEEESVYWLSMGRTFHKVCLKDKIITVTRYLPKYPYESTQIQYSYNLCPPHADA
HFLPFWVEFSHERLEEYKWNYLDQYICSAGSEDFSLIDSLKFWRTRFLLLPAGGARRVAD
GEGHWDVYGEGMGAGRDGLSGTGDWSLLDGFIRFLEGLNRIRRRHRSDRIIRKGATIKGL
QVTGALSSYNPEPIAPPVGKKGTSALSALLELDQTQKSFEEQQLAAQHGGKSCGPFSEAA
SVALTTTYVDSPRKDAAFILDFIRSPRSSYICHSQLPAEQVPANHIEGGLSDKGGNQPGE
RTPATSQATGDQTLGTGAETGGQSGSSGFSLSSSSTLMEILEAIKHPTTGVQLLPEQRGL
PPNCFVSAEVVHWLVSTVENVATQGIAVEIMQKMLDEGLIMHASGDAMRTFVYGFYLYRI
VDKDNEKAPTTQLPPAGANVWSATAMEDFALFQRKWFEVAFVMEERRPCDLPAFLLPWLP
SRPASYASRHSSFSRSFGGRSQAAALLAATVPEQKTVTLDVDVNNRSDRTEWCSCYYHGN
FSLNAAFEIKLHWMAVTAAVLFEMVQGWHRKAASCGFLLVPVLEVPFALSSYLYGDPLRA
QLFIPLNIQCLLKEGCDNLFEGFEPETYWDRMQLFQEAILSRFGFVQDKFSASAFNFPSE
NKPQYIHVTGTVFLQLPYSKRKYSSGQRRRRNSATSANQNLFGSEERVGYNWAYNTMLTK
AWRTGVLGDEKLADRLLRDFTDFCANKDNRLMTYWESCVEKMNASAP
NT seq
4644 nt
NT seq
+upstream
nt +downstream
nt
cttagtcctctgctgctgcaggtcaagagtttgaaagaagacctgcagaaagaaactatc
agtgtagatcagacagtggctcaggccttcaagcttcgtgcctaccaggacgtcatcatc
aatattgtggacccaaaggatgtgactttggatctggtggagctcacctttaaagatcag
tatattggacgaggagacatgtggagactgaagaagagcttagtgagcacgtgtgcgtat
gtgacacagaaagtagagtttgcagggatcagggcccaggccagtgaattgtgggtaaaa
ggagagaaggtcacttgtggctacattagtgaagattcaagggtggtgtttcgctccacc
tctgcgatggtttatatattcattcagatgagctgtgagatgtgggactttgatatctat
ggtgatctttactttgagaaagctgtcaatggtttcctttcggatctgtttgccaaatgg
aaagagaagaattgcagccatgaggttacagtggtgctgttctctcgtaccttctactct
gccaaatcactggaagagttcccagagatccaaagagcgtcagttcgacaagaccatgag
ggacgttattatgaggatttctacagggtggtggcccagaatgaaaggcgtgatgagtgg
atgtctctgcttatcactattaaaaagctcttcatacagtatcctgtgctggtgcgtctt
aaaggagcagatgaattcctgtgcggcaacaattccactgctgctcagggaaattatctg
gaagctatcaacttgtctttcaatgtctttgataagcactacatcaaccgtaactttgat
cgtacgggtcagatgtcagtggtcattactccaggagtgggtgtgttcgaggtggaccgc
ttgctcatgatcctcaccaaacagcgaatgattgacaacggcatcggtgtagatctggta
tgcatgggagagcagcccctccacgctgttccactcttcaagttacataaccgtacagtg
cacggagactctagaattggcgatgactacaacctgcctcactggatcaaccacagcttt
tacacatcaaagagccagaactcatgcagctgttttacaccacggatcaagctggctgga
aaaaaggctcatgctgagaaagctaaaagcaacaaagaacattctcttggtgcaccaaaa
gatgctgagaacagccttccgatccaggtggactatgatgcatacgatgctcaggtcttc
aggcttcctggaccttccagatcccagaggtccaccaacttcaggtcgagtcgggagagg
gagtcagccagcaggaaaagttggggctcaacggatgttggtggaggtgtagtgggcagc
tctcccccaaccaggcctacaggaccagaagaacagaggagcctggcatcagatgacagt
ttgagccacatctccaacatcctactcatcccgcgcccggctcagggccagtacgagatc
agcagctccctggggtacaccagctgcacaagagaattgctagaaaagatggtagaatca
cagagggactccagtgctccgggccgcttcactgtgggaagcgctgagtccactctgcac
atacggccgggcggttacacgccccagagggctctcatcaacccgttcgccccctcacgc
atgccaatgaaactcacctccaaccgccgccgctggatgcacacatttcctgtgggtcct
tctggagaggcaatccagatccaccatcagacgcgacagaacatggcagagctgcaggtt
agtgagcagagagacccggctcgtacctctgctgagctgctagaactggcctatcacgaa
gctacgggaagcaagcggacagcatcccgtcatgcaggagagaatggactgtatatcact
ggagttcctgataatgtctctggaagcccagctagtagcaacagcactggaacatcagtg
aaccgtggttcctttgaggattactccagtccagatccgatgcctagtttttgctgcacg
gtcggggtggactggaagtccctcaccactcctgcctgtctccccctcacgaccgattac
ttccccgaccgccaaaccttgcagaatgactacacagagggctgctacgacctgttgcca
cacactgacctggagaggcgtgacgatgagtccccagtgatgacggcccatcaggtgttt
gaagagttcatctgtcagcgactgatgcaaggctaccagatcattgtacagcctaacagg
aagccacagccggctatagccccgcccctgagcagcagccccctttattccagagggctg
gtgtctcgacgtaaaccagaggaagaggagagtgtttactggctcagtatgggaagaacc
tttcataaagtctgccttaaagataagatcattactgtcacccgctatctcccaaagtat
ccttatgaatccacacagattcagtacagctacaatctgtgccctccacatgcagacgcc
cacttccttccattttgggtggagttcagccacgagcggctggaggagtacaaatggaac
tacctggaccagtacatctgctctgccggctcagaggacttcagtcttattgactctctg
aagttctggcgtacgcgcttcttgctgctgccagcgggcggagccaggcgagtggcggat
ggtgagggtcactgggacgtgtatggggagggaatgggggcaggacgggatggcctctct
ggcactggggactggtctcttttggatggatttatccgctttttggaaggcctgaacagg
attcgtcgccgtcaccgatctgatcgaattatccgtaaaggagctaccatcaaaggcttg
caggtgacaggagccctctcatcctacaatccagagcctatagcaccccctgtgggcaaa
aagggcacctctgccctctctgcactcctggagctggatcagacacagaagagttttgaa
gagcagcagcttgctgctcagcatggtgggaaatcatgtggacctttcagtgaagctgcc
agcgttgccctaacaaccacctatgtcgatagcccccgtaaggatgctgccttcattttg
gactttattcgtagtccacgttcctcctacatctgtcactctcagctgccagctgaacag
gttccagcaaatcacattgagggtgggttgtcggacaaaggaggcaaccaaccaggagag
agaacaccagctacatcccaagccacaggagaccaaaccctaggcactggtgcagagact
ggcgggcagtcaggctccagtggatttagtctttcctcatcttccacactaatggagatc
ctggaagccattaagcaccccaccactggagtgcagcttttgccagagcagaggggcctg
cctcccaactgctttgtcagtgctgaggttgtacattggctggtcagcactgtggagaat
gttgccacacagggaattgcagtagaaatcatgcagaaaatgctggatgaaggtctaatt
atgcatgcctccggtgatgccatgcggacgtttgtttatgggttctacctctaccggatt
gttgacaaggacaacgaaaaggctcctacgactcagctgcccccagcgggagccaatgta
tggtctgcaacagctatggaggacttcgccctgtttcagaggaagtggtttgaggtggcc
tttgttatggaggaacgtcggccttgtgacttacctgccttcctgctgccctggttgccc
agccggccagcctcgtatgcaagtaggcatagctccttcagccgcagcttcggaggacgc
agccaagctgctgcactgctagctgccacggttccagagcagaaaacagtcaccttggac
gttgatgtgaacaatcgcagtgatcgaactgaatggtgcagttgctattaccatggcaac
ttctccctcaacgctgcctttgaaatcaagctgcactggatggctgttactgcagccgta
ctctttgaaatggtgcaaggctggcacagaaaggcggcatcttgtggattcctgcttgta
cctgtgttagaggtgccctttgctttgtcatcgtacctgtatggtgaccctctccgtgct
caattgtttatccccctaaatatccagtgtctgctaaaggagggctgtgataacctgttt
gaggggtttgaaccagagacatactgggacagaatgcagttgtttcaggaggccatactg
tccagatttggctttgttcaagacaagttctcagcatcagcttttaactttccatcagag
aacaaacctcaatacatccatgtaacaggtacagtttttcttcagctgccttactcaaaa
aggaaatactccagtggacagcggcggcgccgtaactccgctacctccgccaatcagaac
ctgtttggttctgaggagcgagttggctacaattgggcctacaacaccatgctgaccaaa
gcctggaggactggcgtgctgggggatgagaaactggctgaccgcctgctgcgagatttc
acagacttttgtgccaacaaggataatcgactgatgacctactgggaaagttgtgtagag
aaaatgaacgcaagtgccccttga
DBGET
integrated database retrieval system
