Sinocyclocheilus grahami (golden-line barbel): 107555633
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Entry
107555633 CDS
T04918
Name
(RefSeq) retinoic acid receptor RXR-gamma-B isoform X1
KO
K08524
retinoid X receptor alpha
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03320
PPAR signaling pathway
sgh04148
Efferocytosis
sgh04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107555633
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
107555633
03320 PPAR signaling pathway
107555633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgh03000
]
107555633
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sgh03310
]
107555633
Transcription factors [BR:
sgh03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
107555633
Nuclear receptors [BR:
sgh03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
107555633
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
Motif
Other DBs
NCBI-GeneID:
107555633
NCBI-ProteinID:
XP_016093974
LinkDB
All DBs
Position
Unknown
AA seq
465 aa
AA seq
DB search
MWHSAALPLHGQSHGRDGGHYSHYTSALNSPPSQPPPLSSMVGHPSVISSSRPLQSPVNT
LGSSMNGLASPYSVIGPSLGSPSVSLPSTPSMGFNTLSSPQMNCVNVNSSEDIKPPPGLA
PLSNMSSYQCSSPGSLSKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDS
KECLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKEKGDNEVESTSSFNEDMPVDR
ILDAEVAVEPKTETYTENSPGNSTNDPVTNICHAADKQLFTLVEWAKRIPNFSDLPLDDQ
VILLRAGWNELLIASFSHRSITVKDGILLGTGLHVHRSSAHSAGVGSIFNRVLTELVSKM
KDMQMDKTELGCLRAIVLFNPDAKGLSNPAEVEALREKVYASLETYTKQKYPDQPGRFAK
LLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQIT
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgtggcattcggcagcgttgcctcttcacggtcagagtcacggcagagatgggggtcac
tacagccactacactagtgctcttaattcacccccctctcagccgccacccttgagttcc
atggtgggtcatccatccgtcatcagttcgtcccgccctctgcagtcgcccgtgaacacc
ctgggctcatccatgaatggcctggcctcaccctactcagtcatcggcccatctctgggt
tcaccgtccgtttccttgccctctactcccagtatgggctttaacaccctcagcagccca
cagatgaactgtgtaaatgtgaatagctcagaagacatcaagcctccaccaggattggct
ccgctgagcaacatgagcagttatcagtgcagcagccctggatccctctccaaacacatc
tgtgccatttgtggggaccgatcttcagggaagcactatggtgtttacagttgtgaaggt
tgcaaaggcttctttaagaggaccatccgaaaagacctgacctacacgtgtcgagacagc
aaagagtgcctgatcgacaaacgccagcgcaaccgctgccaatattgccgctaccagaag
tgcctggccatgggcatgaagcgggaagcagtccaggaagagaggcagcgtgggaaggag
aaaggtgataatgaggtggaatcaacaagcagttttaatgaagacatgcctgtggatagg
attctggatgcagaagttgcagtagaacctaagactgagacgtacacagagaacagtcca
ggcaactcaacaaatgacccagtcactaatatctgccatgcagctgacaaacaactgttt
actctggtggagtgggccaagagaatacctaatttctctgatctgcctctggatgatcag
gtcattttgcttcgagcaggatggaacgagctcctcattgcttcattctctcatcgctca
atcacagttaaagatggcatcttgctgggcacaggcctccatgtccacaggagcagtgct
cacagtgcaggtgtcggctccatttttaacagggtattgactgagctggtgtctaaaatg
aaggatatgcagatggataagacagaactaggctgccttagagccatcgttctcttcaac
cctgatgccaaaggcttgtccaacccagcggaggtagaggcactgagggagaaagtttac
gcctcactggagacctacactaaacagaagtaccctgaccagcctggcaggtttgctaaa
cttttgttgcgtcttcctgccctccgatccatcggactcaagtgtttggagcacctattt
ttctttaagctgattggagacacacccatagacactttcctaatggagatgctggaagca
ccccatcagatcacgtga
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