Sinocyclocheilus grahami (golden-line barbel): 107556199
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Entry
107556199 CDS
T04918
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I-like
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04010
MAPK signaling pathway
sgh04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107556199
04020 Calcium signaling pathway
107556199
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sgh04040
]
107556199
Ion channels [BR:
sgh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107556199
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Tetraspanin
TMEM208_SND2
Motif
Other DBs
NCBI-GeneID:
107556199
NCBI-ProteinID:
XP_016094740
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MRILVNLLLDTLPMLGNVLLLCFFVFFVFGIIGVQLWAGLLRNRCYPEENFTLSAGVALP
APYYSPSEEDERPFICSLPQDNGIMSCSDVPARRVAGHQCCLEVDDLLHHQALGLVTEPF
LNASAVVPGLCVNWNRYYTRCHTGHRNPHKGAINFDNIGYAWIVIFQVITLEGWVEIMYY
VMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQREHQLMQEQRAACLSSSTL
ASLVEPSDCYEEIFQLVCHVLRKARRRTAAFFRILCRKPPEQMHMKTNINGGEKCFQHHD
GATPSASAANQETEEETAEEKDRCMRAEGACRRRSRELWMEMRVKLRGIVESKYFNRGIM
VAILINTISMGIEHHQQPEELTNVLEICNIVFTSMFALEMILKLTAFGFFNYLRNPYNIF
DGIIVIISVCEIVGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFCM
LLMLFIFIFSILGMHIFGCKFSLKTDTGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVL
YNGMASTSPLVALYFVALMAFGNYVLFNLLVAILVEGFQAEGDANRSYSDDDDDEGSSSN
GSEQHKNSLTSSDPKLSSLTPNGHLDLAPLAEEKTRTDFSEENHRSRTICLGRRSSSLRH
SRSSHYHHWGRPPPQLSWSRRCSWNSAGRSTHGLRAGGVIGGSLRVRSVHSNPTEHESLL
PHPPFLSRRHRRALSLDLPELLQRPPLVRKKSVSAEHHDCNGKGPGPQGTLLGEVYPELN
ARKDKHDLEEDTEYSLCFRIQKMMEVYRPDWCEKREDWSVYLFSPQNKFRLLCQTIIAHK
LFDYVVLAFIFLNCITVALERPRIHQGSLVRFLTLFHSLVWQEVVSKGLYLGDRTYLRSS
WNVLDGFLVFVSLIDIVVSMTGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLIT
SLKPIGNIVLICCAFFIIFGILGVQPVINNNPWMLLYFISFLLIVSFFVLNMFVGVVVEN
FHKCRQHQEVEEARRREEKRLKRMEKRRRKAQRLPYYSSYGRVRRMIHSFCTSHYLDLFI
TLIICINVVTMSLEHYNQPRLLKMATGMRALLDTVVQALPQVGNLGLLFVLLFFIYAALG
VELFGELVCNVEYPCEGMSRHATFENFGMAFLTLFQVSTGDNWNGIMKDTLRECPPGDSY
SCNSSLQIISPMYFVSFVLTAQFVLINVVVAVLMKHLDDSNKEAQEDAEMDAEIEMELAQ
GGLSCLGHPECSTGADAGERPSIHTNTNTSQSGFTQDQRRLYSPAQVCVDPE
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgaggatcctggtgaatctgctgctggacacgctgccgatgttggggaacgtgctgctg
ctgtgcttcttcgtcttcttcgtcttcggcatcatcggtgtgcagctctgggctggactt
ctgcgcaaccgctgctatccggaggagaacttcaccctctcagcaggtgtggcactccct
gctccatactactctcctagtgaggaggacgagaggcccttcatctgctctctgccgcag
gataatggcatcatgtcgtgcagtgacgtgccggcgcggcgtgtggcgggacatcagtgc
tgtctggaagtagatgatctcctgcaccatcaggcactgggcctcgtgaccgagcctttt
ctcaacgccagcgccgtcgtccccgggctctgtgtcaactggaaccgatactacacacgc
tgccacaccggacacagaaacccacacaaaggagccatcaactttgacaacatcggatac
gcctggatcgttatatttcaggttattactctggaaggctgggtggaaataatgtattac
gtcatggatgctcactcattctacaacttcatctactttattctgctgattatagtcggc
tcgttcttcatgataaacctgtgtttggtcgtcatagcgactcagttttcagagaccaaa
cagcgtgagcatcagctgatgcaggagcagcgagccgcctgtctgtcctctagcacgctg
gcctcgctggtcgaacccagcgactgctacgaagagatcttccagctcgtctgccatgtc
ctccgcaaggctcgcagacgcactgctgcctttttcaggatactctgccgcaaaccaccg
gagcagatgcatatgaaaacaaacatcaacggaggagaaaagtgcttccaacatcatgat
ggagccacaccttccgcttcagcagccaatcaggagacagaggaggagacagccgaggag
aaagacaggtgcatgagggcagagggggcgtgtcggaggcggagcagagagctgtggatg
gagatgagggtcaaactgcggggcatcgtggagagtaaatacttcaacagaggaatcatg
gtggccatcctcatcaacaccatcagcatgggcatagagcatcatcagcagccggaggag
ctcactaatgttctggagatctgtaacatcgtcttcaccagtatgtttgctctggaaatg
attctcaagctcacagcattcggcttctttaattacctgcgcaatccatacaacatcttt
gatgggatcatcgtgatcatcagcgtgtgtgagatcgtgggtcagtctgacggcggtctc
tcggtgctccgcaccttccgcttgctgcgggtcctgaagctggttcggttcatgccggcg
ctgcgcagacagctggtggttctgatgaagacgatggacaatgtggccacattctgcatg
ctgctgatgctcttcatcttcatcttcagtattttgggaatgcatatatttggctgcaag
ttcagtctgaagacagacaccggagacacggtcccggacagaaagaactttgactctctg
ctgtgggcgatcgtcacagtgtttcagatcctgactcaggaggactggaacgtggtcctg
tataacggcatggcctccacgtctcctctggtggctctgtacttcgtggctctgatggcg
tttgggaactacgtgttgttcaacctgctggtagctattctggtggagggatttcaggct
gagggtgatgccaatcgctcgtactctgatgatgatgatgatgaaggatcttcctctaat
ggaagtgaacagcacaaaaactcgctcacgtcctccgatcccaagctgtcgtctctcact
cccaatgggcatctggatctggcgccgctggcggaggagaagaccaggaccgacttctcc
gaggaaaaccaccggagcagaaccatctgcttgggcaggagatcctcgtctctgcgccac
agccgcagttcccattaccaccactgggggcgtcctccccctcagctgtcctggagccgg
cggtgtagctggaacagcgcgggtcgctccacccatggcctgagggccggaggggtcatc
ggggggagcttacgggtccgcagcgttcactcgaaccccaccgaacacgagtctctcctg
ccccacccgccattcctgtcgcgccgacaccgccgcgctttatcactcgatctgcctgag
ctcctgcagcgccccccgctggtccggaagaagagcgtgtctgctgaacaccatgactgc
aatgggaagggcccgggccctcaggggacgctgctgggagaggtttatccagagctcaac
gcacgcaaagacaagcacgacctggaggaagacacagaatatagcctctgcttccgtatc
cagaagatgatggaggtctatcgtccggactggtgtgagaagagagaggattggtccgtt
tacttattctcccctcagaacaagtttcgtctgctgtgtcagacgatcatcgctcataag
ctctttgactatgtggttctggctttcatcttcctcaactgcatcacagtggctctggag
agacccagaatccatcagggcagtctggtacggttcctcactctctttcacagtctcgtc
tggcaggaggtggtttctaagggtctgtatctgggggatcgtacgtatctgcgcagcagc
tggaacgttctggatgggtttctcgtcttcgtgtctctgattgatattgtggtgtcgatg
acgggcggagcgaagatcctgggcgtcctgcgggtgctcagactgctgagaacattacgc
ccgctcagggtgatcagtcgagctccgggtctgaagctggtggtggagactctgatcacg
tcgctgaagcccatcggaaacatcgtcctcatctgctgcgctttcttcatcatcttcggc
atcctgggagttcagcccgtcatcaataacaacccctggatgctgctgtacttcatctcc
ttcctgctgatcgtcagtttcttcgtcttgaacatgtttgtgggtgtggtggtggagaac
ttccacaagtgccggcagcatcaggaggtggaggaggcgcggcggagggaggagaagcgg
ctgaagcgcatggagaagaggaggcgcaaggcccagcggctgccgtattactcctcgtac
ggtcgcgttcggcggatgattcactcgttctgcaccagtcattatctggacctcttcatc
accctcatcatctgcatcaatgtggtcaccatgagcctggagcactacaaccaaccacgg
ttgttgaagatggccacaggaatgagagcgctgctcgataccgtggtgcaggcattacca
caggtggggaatctgggtttgctctttgttctgctgttcttcatctatgctgcgctcggt
gtcgagttgtttggagaactggtgtgtaatgttgaatacccgtgtgaaggcatgagtcgt
cacgccacgtttgaaaacttcggcatggcgttcctcactctcttccaggtgtctacagga
gataactggaacggcatcatgaaggacacgctgcgcgagtgtccgccgggcgacagctac
tcgtgtaactccagcctgcagatcatctcgcccatgtacttcgtcagcttcgttctgacg
gctcagttcgtcctgattaacgtggtggtggctgtactgatgaagcacctggacgactcc
aataaagaggcgcaggaggacgcggagatggacgcggagatcgagatggagctggcgcag
ggtggcctgagctgtctggggcatccggagtgctcgactggggccgatgcgggcgagagg
ccatcgattcacaccaacactaacaccagccagagcggattcacacaggaccagaggaga
ctctactcaccggcacaggtgtgtgtcgatcctgaatag
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