Sinocyclocheilus grahami (golden-line barbel): 107556481
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Entry
107556481 CDS
T04918
Name
(RefSeq) PR domain zinc finger protein 2-like isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh00310
Lysine degradation
sgh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
107556481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgh03000
]
107556481
03036 Chromosome and associated proteins [BR:
sgh03036
]
107556481
Enzymes [BR:
sgh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
107556481
Transcription factors [BR:
sgh03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
107556481
Chromosome and associated proteins [BR:
sgh03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
107556481
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_4
zf-C2H2
zf-C2H2_6
zf-C2HE
zf-C2H2_ZNF462_1st
Motif
Other DBs
NCBI-GeneID:
107556481
NCBI-ProteinID:
XP_016095095
LinkDB
All DBs
Position
Unknown
AA seq
1493 aa
AA seq
DB search
MTACSYVSVVEEERLSMPSEAFLQQPEVQDAHSDETALHSISEPEGEEIEKGTEGGTDVK
MDCKDKQNASQPVSQNLANQNQTCQTSETEHVGMIKQDYGTEWPLNGTKGDLGPGSKPQR
DLLCPRCERRFASSQGLQRHIQTHALSTCHTQRFKCSRCRRSFSTLFSRRRHEKRHESRN
RKTDDLTDAPCTASQNVHGSAEPLKAASQNPEPNKRINNAADGEQNDDRNSDIKASHVCK
YCKKAFRTHTNLRRHQRRIHERHLLPRGVYKKVKIIQEPDGQQLAETAQDNHTANSQCVE
DIDQEREYMVDISSNISENLSFYIDGKIVSTSAISNCEVIEMNSGGSAVIGLNAVIISPA
QISQALKLETNTSSFTSDLSGQSSTRRRTSTPPLLPQIKTELESESILSTSSSSLSSLTL
SSTSGAPLVTAHLPQCIETVAFNKEKTVYLSPKLKQILQNQDGSKPAFALIADGPKLGPP
LSLTVLSATTTRFKRRTTSPPSSPQQTPDVNIEKQDQDSTKAKKSKLESYGLGNEPEPLN
SPINSSDGAPMQQQILPLDCSVSRTGGNSCNQQPLDLSNSVVKRESSDALAESILDLSIS
GKSLDCNSAGVYLTQPVLRKSKPNSSMLQKVLMNEYGEVDVPSVDAPAAAGVLSVPDITN
VAVVAVSDAGPPKPENVLFELVLPPASINPTPSLLAPVSIHPATPVPPPQCSPSSSPTFV
SFLSTPTVEPSQDIQSLHSAFVVSENIAPTGSVEDCTDNPVHLSQGDMKVTIPDWGSSAP
GGLENLIPVVPSLSLQSPHWVADPAVCELAQRTLVVDSVLASDAQIFSPSLPVNQSNVTS
LAFPPNTVVIEYTVAVKSTENILPALQHNSLPCLSNKIPVDALQQEPHVSPEPQPLSPDT
TLLPETSTQSAPTEQSTSSTDRKLTLTASASVVEAESNENGLENVQSSDCSKQENKVEEE
LPPLHPFCKNFMCNVCEQPFQSMKILSQHVGEHSKGWPYKCEFCVQLFESDTGLLEHRSS
YHGIGKIYVCKTCSKEFAFLCNLEQHQRDLHPGQECSHSEAVHGKLRPENHNDPKTDMAD
PGLPVTEIKQEIDNTTSKADKDSLDNTSEELFTTIKIMASGGVKSKGPDVRLGINQHYPS
FKPPPFPYHNRTPTGTTAASATNFTTHNIPQTFSTAIHCTKCGKSFDNMPELHKHILACA
SANDKKRYTPKKNPIPLKQFAKAQNGVLSPARIVNSKQNFSQKVGQPKKLNWIKMSILNK
KKSQLVQRGRPAGGRKAFAQDDLGVFACPHCRREFTYNASLKKHVAFSCPMRPASRNSKK
RTLSIVSAQENNGSLRRQIANMSAKPQGSGHGPKTITKNQIIKQKAAVDTTQDFRLKRST
ILSTSVVQSSKKGKPVELKSGFMPQLASKQIVLSSVSQEPGVRVHVLSRKMEQRVGDIKI
QPRREDRLSLRLRERVGGPITRSVQQASTTTTALKQPDSHNIIMHPVVLQVKK
NT seq
4482 nt
NT seq
+upstream
nt +downstream
nt
atgacagcatgttcatatgtttcagttgtagaagaggagaggcttagtatgccatcagag
gcttttctccagcaacccgaggttcaagatgcccactctgatgaaactgcacttcatagc
atctcggagccagaaggggaagagatagaaaaagggacagaaggaggaacagatgtgaag
atggactgcaaagacaaacagaatgcaagccagcctgtgtcacaaaatctagctaatcaa
aatcaaacctgtcagacaagtgagactgagcatgttggaatgataaaacaggattatggt
actgagtggcctttaaatggcactaagggtgaccttggccctggtagtaaaccccagcgt
gatttactctgtcctcgctgtgagagaaggtttgcgagtagtcaaggcctgcagcgtcac
atacaaacacatgccctttcaacctgccacacacagcgttttaaatgcagtcgttgcaga
aggagtttcagtacattgtttagtcgtcggaggcatgagaaaagacatgaaagtagaaac
aggaagacggatgatctcacagatgccccttgcactgccagtcagaatgtgcatggcagt
gctgaacctctgaaagcagcatcacagaacccagagccaaacaagcgcattaataatgca
gctgatggtgaacaaaatgatgatagaaacagtgatatcaaagcctcacatgtctgcaag
tactgcaaaaaagcatttaggactcatactaatttaaggagacatcaacgcaggatccat
gagcgccatcttcttcctagaggagtttataagaaggtcaaaatcattcaagaacctgat
ggacagcagcttgctgagacggcacaggacaaccatactgctaattcacagtgtgtagag
gacattgatcaggaaagggagtacatggttgacatctccagtaacatttcagagaatctc
agcttttacatagatgggaaaattgtctcgacaagtgctataagtaactgtgaggtgatt
gagatgaactctggtggctctgctgttattggattaaatgctgttataatcagtccagct
caaatttcacaagctcttaaattagaaactaataccagtagttttacctctgacttgtct
gggcagtcctcaaccagacgtaggacgtctaccccacctttactcccacaaataaaaaca
gaattagagtctgaatccatcttgagtacctcctcatcttccttgtcatccttgacactg
tcctctacatctggagctccgctagtcactgctcatttacctcagtgcattgagacagtt
gcctttaacaaggaaaaaactgtctatctgtctcccaaactcaagcagatccttcagaat
caggatggcagtaaaccggcatttgcactgattgctgatggcccaaaactgggtcctccc
ttatccctgactgttttatctgcaacaacaactagatttaagagaaggacaacctcccct
cccagctcaccacagcaaacccctgatgtgaatatagaaaagcaagatcaggattctaca
aaagcaaagaagtcaaagttggagagctacgggttgggcaatgaacctgagcctttgaat
tcacccataaacagctctgatggagctccaatgcagcaacagatcttgccattggactgc
tctgtatcaagaacaggtggaaactcctgcaatcagcagccactggacctctcaaattcc
gtggttaagcgagagagcagcgatgccttagcagagtccattctggacttaagtattagt
ggaaagagtttagattgtaactcagctggagtctatctcactcaacctgttttaaggaag
agtaaacctaactctagtatgcttcagaaggtgctaatgaatgagtatggtgaggtagat
gttccttctgttgacgctccagctgctgcaggtgtcctcagtgtccctgacataacaaac
gttgcagttgtggcagtgtctgatgcaggtccaccaaaacctgaaaatgttttgtttgag
ttggttcttcctcctgcttcaatcaatccaaccccttcactgctcgctccagtcagcatc
catccagctaccccagtccctccacctcaatgttcaccttcttcatctccaacttttgta
tcctttctatcgactcccacagtggaacccagtcaggacattcaaagtcttcattcagcc
tttgtggtatctgaaaatatagcacccacagggtctgtagaagactgcactgataatcct
gtacatctttcacagggtgatatgaaagtgacaatccctgactgggggtcctctgctcct
ggaggtctggaaaaccttatacctgtagtcccttcactgagtttacaaagccctcactgg
gttgctgatcctgctgtatgtgaactagctcaaagaacattggttgtagactctgtatta
gcttctgatgcacagatattttctccatctctgcctgttaaccagtccaacgtcacatcc
ttggcttttcctccaaacactgttgttattgagtatacagttgcagtgaaatctacagaa
aatattcttccagctctccaacataattctcttccatgtctctcaaataaaattcctgtc
gatgcattacagcaagaacctcatgtctcacctgagccacaacctctcagtcctgatacc
accctattgcctgaaacctccacacagtcggcaccaacagagcagtcaacaagctcaaca
gatcgtaaactgaccctcactgcttccgccagtgttgttgaagcagagagcaatgagaat
ggactggaaaatgtccagtcctctgattgttctaagcaggaaaacaaagttgaagaagag
ttacctcccttgcatcctttttgcaagaacttcatgtgcaatgtttgtgaacagcccttc
cagtccatgaagattcttagtcaacatgtaggtgagcactccaaagggtggccctataaa
tgtgaattttgtgtgcagttgtttgagagtgacacaggtttgctggagcaccgttccagt
tatcatggcattggtaaaatttatgtttgtaaaacatgttctaaggaatttgcttttctc
tgcaacttggaacagcatcagcgagatctccatcctggtcaagagtgctcacacagcgaa
gcagtacatggcaagttaaggcctgaaaaccataacgatcccaaaaccgacatggctgac
ccaggccttccagtcacagaaattaagcaagaaattgacaacacaacctcaaaagcagac
aaggattccttggacaacacttctgaggaactgttcacaacaattaaaatcatggcatct
ggaggggtcaaatcaaaaggcccagatgtacgattaggcattaaccaacattacccaagt
ttcaaaccgcctccttttccataccacaatcggacaccaactggaacgacggcagcatcg
gccaccaacttcaccacccacaacatccctcagaccttcagcacagccattcattgcacc
aaatgtggtaagagctttgacaacatgcctgaactgcacaagcacatcttagcttgtgct
agtgctaacgacaagaagcgatacactcctaaaaagaaccctataccacttaagcagttt
gcaaaagcgcaaaatggggtgttatcacctgcaaggattgttaatagtaagcagaatttc
tcgcaaaaggtcggccaaccaaaaaaactgaactggataaaaatgagtatcctgaataag
aagaaatctcagctggtgcaaaggggcagacctgctgggggaagaaaggcctttgctcag
gatgacctgggcgtttttgcatgtcctcactgtaggagagagtttacatacaatgctagt
ttaaagaaacacgtagcttttagctgtcccatgagaccggccagtagaaactccaaaaaa
agaacactcagcattgtttcagcccaggagaacaacgggagccttcgcagacaaattgca
aatatgagcgcaaagccacaaggttcaggccacgggccaaaaacaataacaaagaatcag
atcattaagcaaaaagcagcagttgataccactcaggattttaggcttaaaagatctacc
attctgtcaacatctgtggttcaatctagtaaaaaaggcaagcctgtggagctaaagagc
ggctttatgccacagctggcttcaaagcagatagtcctctcatctgtctctcaggagcca
ggtgttcgggtacatgttttaagtagaaaaatggagcagagagtgggtgacataaagata
cagcccagaagagaagaccgtttgtctctgaggttgagagagagagtaggaggacctatt
actcgcagtgtgcagcaggccagcaccacaacaacagcccttaaacagccagacagtcac
aacattatcatgcaccctgttgttctccaagtcaagaaatga
DBGET
integrated database retrieval system
