Sinocyclocheilus grahami (golden-line barbel): 107556563
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Entry
107556563 CDS
T04918
Name
(RefSeq) polycystin-1-like
KO
K04985
polycystin 1
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sgh03037
]
107556563
04812 Cytoskeleton proteins [BR:
sgh04812
]
107556563
04040 Ion channels [BR:
sgh04040
]
107556563
04091 Lectins [BR:
sgh04091
]
107556563
Cilium and associated proteins [BR:
sgh03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
107556563
Cytoskeleton proteins [BR:
sgh04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
107556563
Ion channels [BR:
sgh04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
107556563
Lectins [BR:
sgh04091
]
C-Type lectins
Others
107556563
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
REJ
PKD_channel
PLAT
PKD
Ion_trans
Lectin_C
Polycystin_dom
GPS
YABBY_N
7tm_1
Motif
Other DBs
NCBI-GeneID:
107556563
NCBI-ProteinID:
XP_016095188
LinkDB
All DBs
Position
Unknown
AA seq
2729 aa
AA seq
DB search
MAQGPFYDLDTEDSEMKECTSMALASGKWINEQCNKENFVICGKKISVFLPSLESYVAGV
PLMSGIYIVSRIQLLPSPPDPGQQMVEIMLFPGLWFSHEGRVLSLDLVTQPSDQLTFARV
QILRPYCSPSHHLVPPGCSSLLNPFSCCSVTPMCNTTGGCASGQYWCHLLEICLPVTSPC
SPYHSLNGGHVFPLPPRYPATPPFFHLMADMSLTLTPSTEHTHISVIVQDKHITVYPDDI
LALQHTRRASEFLHCVATTSSSWRQSYLSLHGPEWGGWLEGGLSAQPGQGQWLDELVCDL
RVIYEDTMPHFGVSAIPSTSQSNSPIKAESPVTGLQVLYPKLDKDIQMHVAVNVPTLIVI
QIISGGNATSYWSDPVSKNGVPFVSSCPAEMPEIEGGCVRASLDMWFSHVYMKLSSQGEH
MLNIMASNSLNSQTLSVRVVSHIPVTGLRIQPQGFNRVLVDIPQLFTASVVTGSSVKYTW
VIDDLVQFPQTGESYSVVFKKPAEYKLKLIEVKLTADVMTPLADLEVISMPEAIAVNTST
CYTIQVKSDISIGVTIRWDFGDNTASVSHLVSTPLEMEDSYLHRSAKYVYLQDSIHHTFS
FPEASKNISFQVSSGSQANYHWTFLLNGVQSSREIGQNVHFTPFTNGSLSVTVETDNGFC
SQSLTRRATIQKHMKKVKLFTSDDGAFIDYPITFVAITDGGSNLKFLWDFGDASEGALVT
ESNRQVHKYNVTGGSHRFWSSQYDLILDATESFDPDSEENDIELFQFQWGYTIENTTAMP
SAVSTLHQHIPGNGSILLLPRSALLPDRMYHFTLTLYKSGRQPVSISQLVTVYNTTLLPV
TVKCVSCNSLLSFHVRHSHYITLAGHCSSCQDTVQYRWTAENQKGEALTLNEVTTLTGSL
WREIVIKPGVLKEGQEYTFTLNVSEPASGLWGSASITLVPNHPPYGGICTLSPDDSLHFL
ETMVSYSCSEWMDDDSDSAQLIFSLQVAQCENFGPLCPLITLYRGTQSTFSSLVPLGILS
TEENLSVIYVLVLVEDSMGASVIAARKNLTVVLRDQCTTEWLRNKSQSELWALRQQGNPQ
DITQYSVALSSQLNQLASIKAEGLEDRIQIRGNVIQALASLPVSSLQDAALISSALAQST
VVPSEVQCNGCRAKVLKVTEKMIKVIREQTGQADINPTDTGRNILAVLSSTLTADQRQRN
NSGLKHVDTSETAVSALGQILELMRSLMLSRMSGEEALSLAVPKITAVGVRGDPTKDLLC
TNPLSHCQFHIPSALSSQLKEEKQEVLQILLQMEGEENLFIPAAEPAISTTLAAMEFATP
QGQIISITNLTLDTAIQFTLHKKVQETEDERLLWKTFTLPPKGNVNFTVKAMDLRDPQTG
LYVALNFSLIPGAGEEASGLVWISVDDQPVHPLSEHTHSEELSLSLSAGTPSLEHTIFLT
PIMLCRFFSDDERRWSSDGLSPLSGSSPHTAHCLTHHLTMFGASLFIHPEALLLLPPSEE
PVRNVVVGIICGVLLLIYLLVGLIAHKLDHLESLRLSWVPLCGQKGHYKYRVLVKTGWKK
GSGTTAHVGISLYGLNKSGSRHLQREGAFQRNSVDDFQVETDANLGEIWKIRIWHDNTGL
DPSWYLKHVIVWDIQTDNMFFFLVEDWLSVENEKNSGRGEKVILASCPQELQQFKRILHS
QLLFGLREHHLWISLWERPAHSHFSRAQRVTCCALLLHLYLAAGAVWYGAVGRKGSSGPV
STQMVMNAENILVGITVAALMFPLQTILRFLFQNTKSKVTLAVSLPPSPVSHTVEMDVFL
SHPDLSCSSFLSLPTDPDSSIYDGPSPFTNSLKKLDSEFWNTPDPGNDRMDQWPSCESIF
GLSELTGTSHLLKRKKAILQLHLSTPTSDHNTLEPIKSSEEDLITITADLDPSNTLSLEP
EASDSGHFTPNDTILSDIQDSLCSEWSDLSVDTPTSEPGFHKSSSSLSVLSDASTFLPSL
PPDSISTISNTRIGVVRGVPGLFLPSWVLRMVYLLVAVLLGTSLALVGLYGSRFSSSVVL
MWLVSALSAFLTSALLFEPFAICIQALYLAAVVKPVDPEGENRLAQETEVRRTEEDLGDK
VHPLGGYGLLQAKEEARKLRTLRALMRSCLVYLLFLLVVLMVNYQEYVHETNSRRLHSAI
KHTLIRTLPGQPSLTALSGTKAVLIEFTHYHKQTGVLAPVSILLDQTQTGRILSFLSIQP
LHVSPFSGPDLHVTLTVLLLLFALCFVSAEVWALIRKPSQYLRQAWRWFQPLLALLTLAA
AVLRLYFLYTTAAFISRHCSRPSCFADFHSAATLAKKSSQLSAILLTLLVLKMVGILRFV
RRWLVIGRVIRQVFPQICGVVFLLLLLLLLFSHTGIMLFSGSVEGFRTLGQASSSLLCLL
RGHMGLRRLCEHHPVVGPLYCLSAVGIGFWVLGRLCAAVLIRTYRMVQADIYRPSMEPQD
YEMVQFLIKRLKLWMGLSKTKEFRHRVKFEGMVPPPSRSSQGSEASNCSVPLSPIGPRRV
SSASSLASNSSVISGCFDFHHYVDRLVPCVDSLMAGFDRVNQLTEEVYNFELQLQQIQSR
IYQRRKSQPQQVTFEGRDPTPKLPLLPQHPSTSVLECNHTPASLQGVINTLPHCRATHSE
SSLMGPAAQLGKRILSALDGSMNNPNLRKWGVPRRRAWNSVTCHSADTAQRLPGSHSTVT
LPVRPRSEDGDREYLCDSMPIKRQAWHTE
NT seq
8190 nt
NT seq
+upstream
nt +downstream
nt
atggcacagggtcctttctatgatttagatactgaagacagtgagatgaaggaatgtact
tcaatggctttggcctccggaaagtggataaatgaacaatgtaataaagaaaatttcgtt
atatgtgggaaaaagatctcagtgtttttgccatcgctggagagctatgtggcaggtgtc
ccactaatgtctggcatatacatagtgtcccggatacaactgctaccgtctccaccagac
ccaggacaacaaatggttgagattatgttgttcccgggtctttggttcagtcatgaaggt
cgagtcctgtctttggatttggtgacgcagccaagtgatcagctgacctttgctagagtg
caaatcttacggccgtactgcagcccaagtcatcacctagtaccacctggttgtagttct
ctcctgaacccttttagctgctgttcagtgacgcccatgtgcaacaccactggtggctgt
gccagtgggcagtactggtgtcacctgctggagatctgtctgcccgtcaccagtccgtgc
agcccttaccactccttaaacgggggacatgtattccctctgcctcctcgctaccctgcg
acgccaccgttcttccacttgatggcagacatgtcactgacactgaccccaagcactgaa
cacacacacatcagtgttatagtacaagacaaacatatcactgtctatcctgatgacatt
ctggcattgcagcacactagaagagcaagtgaatttctacattgtgttgccactaccagc
tcatcctggcgccagagttacctctccctgcatgggcctgagtgggggggctggttagag
gggggtctgtctgcccaaccgggacagggccaatggcttgatgaactggtctgtgacctc
cgggtgatttacgaggacacaatgccacacttcggggtttcagcaatacccagcacctca
cagagcaacagtccaatcaaagcagagagtcctgtcacagggttgcaagttttatatcca
aagcttgacaaggacatccaaatgcatgttgctgtcaatgtcccaaccctcattgtcatc
cagatcatttcaggaggaaacgcaaccagttactggtcagaccctgtgtctaagaacgga
gtcccttttgtatcttcttgccctgctgagatgcctgagattgaaggagggtgtgttagg
gcttctcttgacatgtggttctctcatgtatacatgaagctttctagtcaaggggaacat
atgctaaatatcatggcttcaaacagcttgaactcccagactctgagcgtgagagttgtg
tctcatattcctgtaactgggctgagaatccagcctcagggcttcaacagagttctagtg
gacataccacagttgtttacagcttcagtagttacaggttcatcagtgaagtatacttgg
gttattgatgacctggtccagtttccacaaacaggagagtcctacagcgtggtttttaag
aagccggcagaatacaagctaaagttaattgaggtgaagctcacagctgatgtgatgacc
ccattagctgacctagaagtaatttccatgccagaggccattgctgtaaacacctcaact
tgctacacaattcaagtaaaatctgacatctctataggcgttacaatcagatgggatttt
ggtgataatacagcatctgtcagtcacctagtttccactcctttagagatggaagacagc
tatcttcaccgaagtgccaaatatgtctatctgcaagattccatccatcatacattttct
tttccagaggcatccaaaaacatcagttttcaagtgtccagtggctcacaagccaattac
cactggacttttctattaaatggagtccagtcctctcgagaaatcgggcaaaatgttcac
ttcacacctttcactaatggatccctgtctgttacagtggaaactgataatggcttctgc
tcacagtccctgaccagaagagcaacaatacagaagcatatgaagaaagtgaagcttttt
acctctgatgatggagcttttattgattatccgatcacatttgttgccatcacagatgga
ggcagcaaccttaaattcctttgggattttggtgatgccagtgaaggagccctggttaca
gaatccaatagacaagtccacaaatacaatgttactggtggttctcacaggttctggtca
agtcagtatgatctgattttggatgcaactgagtcttttgatccagattcagaggagaat
gatatcgagttgtttcagttccagtggggttacactatagagaacacaacagcaatgcct
tcagctgtttccacccttcatcaacatattccaggaaatggaagtatactgcttcttcct
agaagtgcactgctgccagacagaatgtaccactttactctcaccctttacaaaagtgga
cgacaacctgtctctatatcacagttggttacagtgtacaataccacgttgctacctgtg
actgtaaagtgtgtctcctgtaattccctgctgtctttccatgtgaggcacagccattac
attacattggctggtcattgttcttcatgtcaagacactgtacagtacaggtggactgca
gagaatcagaaaggtgaagctctaacactgaatgaggtcactaccttgacaggaagtctc
tggagagaaatagtcattaaaccaggggtgctaaaggagggccaagaatacacctttact
ctcaatgtgtctgaaccagcctctgggctttgggggtcggcaagcatcaccttagtcccc
aaccatcctccatatgggggtatttgcactctgtcacccgatgactcacttcatttccta
gaaaccatggtctcttacagttgctcagagtggatggatgatgacagtgactcagctcag
ctgatattttcactgcaggtggcacagtgtgaaaattttggaccattatgtcccttgatt
accctttacagaggcactcagagcacattcagctccctggtgccactgggtatactgagc
acagaggaaaacttatctgttatttacgtgctggtactggtcgaggacagtatgggggca
tcagtcatcgcagcaagaaagaacctgacagtggtgctgagagaccaatgtacaacagag
tggttgaggaataagagccagtcagagttatgggccttgcgtcaacaaggaaaccctcag
gacattactcaatattctgttgctctgagcagccaacttaatcagctagcatccataaag
gctgaagggttggaggacaggattcagatacgtggaaatgtcattcaggctctagcgtct
ctgccggtctcctccttgcaggatgcggctctgatcagctcagctttggcccagtctaca
gtggttccctctgaagtgcagtgcaacggctgccgtgcaaaggtgctgaaggtcacagag
aagatgatcaaagtgataagagaacaaacaggacaggctgacatcaaccccacagacacc
ggcaggaacattctggctgttttaagcagcacactgactgctgatcagaggcagaggaac
aattcaggcctcaagcatgtggatacatcagagacagctgtatcagcactgggccagatt
ttagagctcatgcgttcattaatgctgtcgcggatgagtggagaagaagctctctctctc
gctgttcctaagatcactgcggtgggtgtacggggtgaccctactaaagacctcctgtgc
acaaatccccttagccactgccagtttcacatcccatcagcactgagctctcaactaaag
gaggaaaaacaagaggttctgcagatccttctgcaaatggagggtgaagaaaacctattt
attccagctgcagaacctgctatatcaaccacacttgcagccatggagtttgctacacca
cagggacagatcatttcaatcaccaacctgacactagacactgcgatacaatttacttta
cacaaaaaagtacaagagacggaagatgagaggttactatggaaaacatttactctgcca
cccaagggaaatgtaaattttacagtcaaagcaatggacctcagagatcctcagactggc
ctctatgttgccttaaacttcagtctcattccaggagctggtgaggaagcctctggacta
gtatggatctctgtagatgaccaaccagttcatccactgtctgaacacactcattctgag
gaactcagtctctctctttcagctgggactccatcactggagcacaccatcttccttaca
ccgatcatgctgtgccggttcttcagtgatgatgagaggcgctggagcagtgatggcttg
agtcctctgagtggcagcagcccccatactgcccactgcctcacacatcacctcactatg
tttggagccagcctcttcatccatcctgaagcacttctactgctgccaccttcagaggag
ccagtgaggaatgtggtggtgggaataatttgtggagtcttgctgttaatttatctgctg
gttggtcttatcgctcacaaactggatcacctggaaagtctacgtcttagctgggttcct
ctgtgtggtcagaaaggtcactacaagtacagggttcttgtcaaaacaggctggaaaaaa
gggtctggtaccactgcacatgttggcattagcctgtatggcctgaataaaagtggctca
cgtcaccttcaaagagaaggagctttccagaggaatagcgtggatgacttccaagttgaa
acagatgccaatctcggagagatctggaaaatacgcatctggcatgacaacacaggccta
gacccatcctggtacctaaaacatgtgatagtctgggacatacagacagacaacatgttc
ttcttcttggtagaagactggttatctgtggagaatgagaagaactctggaaggggggag
aaagtaattttagcgtcttgtcctcaggagctgcagcagtttaagaggatcctacattcc
cagttactgtttggccttcgagagcaccatctctggatttcattatgggaacggccggcc
cacagtcactttagccgagcccagagggtcacctgctgtgccctcttattacatctctat
ctggcagctggggcagtttggtatggagcagtgggcagaaagggcagcagcggcccggtc
tctacccagatggtgatgaatgcagagaacattctggttggaataacagttgcagctttg
atgttccctctccaaaccattctcagatttctcttccaaaacaccaaaagcaaggtgaca
ttggctgtatctctgcctccctctcctgtgtctcatactgtggagatggatgttttcctc
agtcacccagatctctcctgttcatcttttctgtcactgccgacagaccctgactcttcc
atctatgatgggccatctcctttcactaattccctgaagaaactagattcagagttctgg
aatactccagatcctgggaatgaccgaatggatcagtggccatcatgtgaaagtatattt
ggcctgtctgagctgacaggaaccagtcaccttctgaagagaaaaaaagccattctacaa
ctacatttgtcaactccgacctctgaccacaacaccttagagccaataaagtcttcagag
gaagatcttatcactataactgcagacttggatccctcaaacacactttccttggagcca
gaagcatctgacagtggccatttcacacccaacgacaccatcctgtctgacatccaggac
agcttgtgtagtgagtggtctgatctgagtgtggatacgcctacatctgaacctggcttt
cacaagtcctcctcctcactctcagtgctcagtgatgccagcacatttctccctagtctc
ccacccgactctataagcacaatctccaacacacgcattggtgttgttcgtggtgtacct
ggcttgtttcttccatcatgggttctgcgtatggtttatctgctggtggctgttttgctg
ggaacaagcctggctctggtgggactatatgggagcaggttttccagctctgtggttctc
atgtggctggtgtctgccctgtcagccttcctcacttctgccttgctgttcgaaccattt
gcaatatgtattcaggcactatatctggctgctgtggtgaaaccagtggacccagagggg
gagaaccgtttggctcaggagacagaagtcagaaggacagaagaggatttgggggataag
gtgcatcctctcggtggatatggcctgctgcaggctaaagaggaagcacggaagctgaga
acacttagagccttaatgaggagctgcttagtctatttgctcttcctgttggtggttctg
atggtgaactaccaggaatatgttcatgagactaacagcagacggcttcactcggctatt
aaacacacactgatcaggactttaccaggtcagcccagtctcactgcattatcagggaca
aaggcagtattgattgagttcactcactatcataaacagacaggcgtcttggcaccagtc
tctattctcctggatcaaacacagacaggcagaatcctttctttcctttccatccagcct
ttacacgtctctccattctctggtccagacttacacgttacattgacggttctgctactg
ctgtttgccctgtgctttgtgagtgctgaagtatgggccttgatcagaaagccaagtcaa
tacctgaggcaagcctggcgctggtttcagccattgttagctcttctgacgctagcagca
gctgttcttcgtctgtatttcctctacacgactgcagccttcatctccagacattgctcc
aggccctcctgctttgctgacttccatagtgctgcgacactggccaaaaagtccagtcag
ctctcagcaattttattaaccctcttggttctaaagatggtggggatcttgcggtttgtt
aggcgatggttggtgatagggcgggttattcgacaagtattccctcagatctgtggcgtg
gtgtttctgctgctcctcctgttgcttctgttctctcacacaggcatcatgctcttctcg
ggttcagtagagggctttaggaccttagggcaggccagttcctctctgctgtgtttgtta
aggggccacatggggttgcgtcgactttgtgagcatcatcctgtggtgggacctctctac
tgcctgtctgccgtgggcattggattttgggtactggggcgcctatgtgctgctgtattg
attcgaacataccgaatggtacaggcagacatttacagaccatccatggagccacaggac
tatgagatggtacagttcctcattaaacgcctcaagctatggatggggcttagcaagacc
aaagagtttaggcacagagtcaagtttgagggaatggttcctccaccctctagatcctcc
cagggctctgaagcctccaactgctctgtcccgctcagtcccatcggtcctcgccgggta
tcatctgcctcttctttggcctccaattcatctgtcatttcagggtgttttgacttccac
cattatgtggaccgcctggtgccctgtgttgacagcctcatggctggtttcgaccgcgtc
aaccagctgactgaagaagtctataactttgagctccaacttcagcagatccagagcaga
atttaccagagaagaaagtctcagcctcagcaggtgaccttcgagggacgtgatccaaca
ccaaagctgccactgctccctcaacatccatctacctctgttttggaatgtaaccacact
ccagcttctcttcaaggtgtcattaatacccttccacattgccgtgctacacactcagag
tcctccctgatggggcctgctgctcagttaggtaagagaatactttctgcactggatgga
agcatgaacaacccaaacctgagaaaatggggtgtcccaagacgcagggcctggaattca
gtcacctgccattctgctgacactgctcagaggttacctggatctcacagcactgtgacc
ttgccagtgagaccccggagtgaagacggagaccgagagtatctatgtgacagcatgccg
attaagagacaggcatggcacactgaataa
DBGET
integrated database retrieval system
