Sinocyclocheilus grahami (golden-line barbel): 107556680
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Entry
107556680 CDS
T04918
Symbol
rhbdl1
Name
(RefSeq) rhomboid-related protein 1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sgh01002
]
107556680 (rhbdl1)
Enzymes [BR:
sgh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
107556680 (rhbdl1)
Peptidases and inhibitors [BR:
sgh01002
]
Serine peptidases
Family S54: Rhomboid family
107556680 (rhbdl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rhomboid
DUF5580_M
EF-hand_7
DUF5580
Motif
Other DBs
NCBI-GeneID:
107556680
NCBI-ProteinID:
XP_016095334
LinkDB
All DBs
Position
Unknown
AA seq
372 aa
AA seq
DB search
MDRSSLFQLIQEQLDPEQTGFIAVENFTSLAEHHELQLDPSKLEMLMALVESNEHGHVCY
QELIELLNSKRSSSFRRAIANGRRTLQREILLDETGLGVYKRFVRYVAYEILPCETDRRW
YFHQSRLCPPPVFMTIITIVQIIVFMCYGVMLNKWVLQTYQPDFMKSPLVYHPGHRAQIW
RFFSYMFMHVGLEQLGFNALLQLMIGVPLEMVHGILRISLLYMAGVVAGSLTVSITDMRA
PVVGGSGGVYALCSAHLANVVMNWAGMKCPYKLLRMILALVCMSSEVGRAVWLRFSPPLP
SSGPQPSFMAHLSGAVVGISMGLLILRSYDESLHKQCSWWVLIFSFITFLLFAIFWNIFA
YELLGVQIPPPP
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggatagaagctctctgtttcagctcatacaagagcagctggacccagagcagactggt
tttatagcagtggaaaatttcaccagtctagctgagcaccatgagttacagctggacccc
agtaaactggagatgctgatggctctggtagagagcaacgaacacggacacgtctgctac
caggaactcatagaactgctgaacagtaaacgttccagtagtttccgccgagccattgca
aatgggcgtcgcactctgcagcgagagatcctattggatgagacggggctgggcgtgtac
aagcgcttcgtgcgctacgtggcctacgagattctgccatgcgagacggaccgccgatgg
tacttccatcagagcagactctgccctcctcctgtgttcatgaccatcattaccattgta
cagatcattgtgtttatgtgttacggcgtgatgctcaataaatgggtgttgcaaacctac
cagccggatttcatgaagagtccgctggtgtatcatcccggacaccgcgctcaaatctgg
aggttcttcagctatatgttcatgcatgttgggttagagcagttgggtttcaacgctctt
ctccagctgatgattggagttcctctggagatggttcatgggatcctgaggatcagtctg
ctgtatatggcaggagtcgtcgctggttctctgacggtgtccatcacagatatgcgcgct
ccagtggtgggcggatccggcggggtctatgcactctgctcagcacatcttgccaacgtt
gtcatgaactgggccggtatgaagtgtccatacaaattgctacggatgattcttgcactt
gtttgcatgagttcagaggtggggcgcgccgtatggctgcgtttctccccgcccctcccc
tcctccggaccgcagcccagtttcatggctcatctgtcgggcgcagtggtgggcatcagc
atggggctgctgatcttgcggagctatgacgaatctctgcataaacagtgctcctggtgg
gtcctcatcttctccttcatcaccttcctcctcttcgccatcttctggaacattttcgct
tacgagctgctcggggtacagatcccgccccctccctaa
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