Sinocyclocheilus grahami (golden-line barbel): 107556707
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Entry
107556707 CDS
T04918
Symbol
dis3
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107556707 (dis3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgh03019
]
107556707 (dis3)
Messenger RNA biogenesis [BR:
sgh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
107556707 (dis3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
Rrp44_S1
CSD2
Toxin_R_bind_C
Terminase_7
Motif
Other DBs
NCBI-GeneID:
107556707
NCBI-ProteinID:
XP_016095368
UniProt:
A0A672NFL1
LinkDB
All DBs
Position
Unknown
AA seq
950 aa
AA seq
DB search
MLKSKTFVKKTRSGGVLKIVREHYLRDDIWCGSEVCKECKDEAPVLQEHACIESNLCSFP
HYLIPDTNVVLHQIDILEDPLIRNVIILQIVLQEVRHRSAPVYKRIKDAIHEKEKHFYTF
TNEHHRETFIEREQGETANDRNDRAIRVAAKWYTDHLAKKTNGGSLKVVLLTDDRANKEK
AEQYGLVVYRCEEYIKSLIGNPELMDRLALQPDDQNEITGSKLLFPEHLPLSRIQSGIKN
GMFLQGTFHANRDNYLEGKVFINREGEEINEVLLQGLQNLNRAVHQDVVAIELFPKERWV
APSSVVLQDDSPNDEDAEEDETENKLKGVPSDSSVLKPTGRVVGIIKRNWRPFCGMLSQS
MIKEATRHLFTPADRRIPRIRIETRQAANLVRQRIMVAIDGWPKNSRYPNGHFVKNLGSA
GDKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEEDLKVRADLRHLCVCSVDPPGC
TDIDDTLHCRELENGNLEVGVHIADVSHFIRPGNALDQEAASRGTTVYLCGKRIDMVPEL
LSSNLCSLRSNVERLAFSCIWEMNHNAEILKAHFTKSIINSKASLTYAEAQMRIDDSTMK
DDITKSLRGLNRLAKILKGRRIAKGALTLSSPEVRFHIDSETHDPIDMQSKELKETNSMV
EEFMLLANISVAQKIYDEFSECALLRKHPSPPPSNYDILIKAAKSRDLNIHTDSAKALAD
SLNNATVENFPYFNTLLRILATRCMMQAVYFCSGMDSDFHHYGLASPIYTHFTSPIRRYA
DIIVHRLLAVAINADSTYPDLMDKHKQSALCNNLNYRHKMAQYAQRASVAFHTQLFFKNK
GIINEEGFILFVRKNAIIILIPKFGLEGAVFFDNKDKPSPHLSFDSEGPTLKVEEHTFRM
FDKVKVTISLDASNIQHQRIRMALIEPVIPGVSVPVPESEPEAKKPKLDC
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaatccaaaacatttgtgaagaagacccgctctggtggagtgctgaagatagtg
cgcgaacattacctcagagatgatatctggtgtggaagtgaagtttgtaaggagtgtaaa
gatgaagcgcctgtgctgcaagagcacgcatgcatagagagcaacctgtgctcatttccg
cactatttaatcccagacaccaatgtggttttacatcagattgacatccttgaggaccct
ctgatcaggaacgtcatcattcttcagattgttttacaagaggtcagacacaggagtgcc
ccagtctacaaaagaatcaaggatgctattcatgagaaggaaaagcacttctacaccttc
actaatgagcatcacagggagacattcattgaacgagagcaaggggaaaccgctaatgat
cgtaatgatcgagccatccgtgtcgctgctaaatggtacacagatcaccttgctaaaaag
accaatggtggttcgctgaaagtggttctgctgaccgatgatcgagccaataaagagaag
gcagagcagtatggtctggttgtgtacagatgtgaagagtatatcaagagcttgattggc
aaccctgagctcatggacagacttgcattacaacctgatgatcaaaacgaaatcactggc
agtaagttactgtttccagagcatctgcccttatccaggattcagagtggcattaagaac
ggaatgttccttcaaggcacgttccatgccaacagagataactatctggagggcaaggtc
ttcataaatagagagggggaggaaatcaatgaggttctacttcaaggccttcagaattta
aaccgggctgttcatcaggatgtagtggctattgaattatttcccaaagaacgctgggtt
gctccatcatctgttgtgctgcaggatgatagtccaaatgatgaagatgccgaggaagat
gagactgaaaataagctgaagggtgtaccatcagactctagtgttctcaagcccactgga
cgagtggtgggcattataaagaggaactggaggcctttctgtgggatgctctcacagtca
atgatcaaagaggcaacaaggcacctcttcaccccagcagaccgacgaatcccacggatt
cgtattgagaccagacaagccgccaatctggttagacagaggattatggttgctatcgat
ggctggcctaaaaactccagatacccaaatggtcactttgtgaaaaaccttggctctgct
ggagataaagagactgagacagaggtgcttcttctagaacatgatgttcctcatcagccc
ttctctcaggctgttcttagcttcctacccaagatgccctggagtattactgaggaggat
ttgaaggtcagagcagatcttagacacctctgcgtgtgtagtgtggatcctcctggctgt
acggatattgatgatactcttcactgtcgggaattggagaatggaaacttggaggttggt
gttcacattgcagatgtcagccattttattcggccaggaaatgctctagatcaagaggca
gcaagcagaggcactacagtctacctttgtggaaagagaattgacatggttcctgaactt
ctgagttccaacttgtgttctctgcggtccaatgtcgagaggttagcgttctcttgtatt
tgggagatgaaccacaatgctgaaatcctcaaagctcacttcacaaagagcatcattaac
tccaaggcctcccttacatatgccgaagctcagatgaggattgatgacagcaccatgaag
gatgacatcacgaagagcctgcggggccttaacagactggccaagatcttaaagggccgg
aggattgcaaaaggagcgctgaccctctcctctcccgaagtacgtttccatatcgacagc
gagacacacgaccctatagatatgcagtccaaagaactcaaggagactaattctatggtg
gaggagttcatgttgttggcgaatatctctgtagcacagaagatctacgatgagttctca
gaatgtgctctactgaggaaacacccttcaccaccgccatcaaactatgacatcctcatt
aaggctgcaaaatcaagggacctcaacatccacacagattcagccaaagctctggctgat
tccctgaacaatgcgacagttgagaactttccgtacttcaacaccctgctgaggattctg
gccacccgctgcatgatgcaggccgtgtatttctgctctggcatggacagtgatttccac
cactatggcctggcatcacccatttacacacacttcacatcacccatcagaagatatgct
gatatcatagttcaccgtctgttagcagtggctattaacgcagacagtacgtacccagat
ttgatggacaagcataagcagtcagccttatgcaacaacctcaactacagacacaaaatg
gcccagtatgcacagagagcctcagtggcgttccacactcagctattcttcaagaataag
ggaatcataaacgaggaaggcttcattctttttgtaagaaaaaatgccatcatcatcctc
atccctaaatttggattggagggcgctgtgttctttgacaacaaggacaaacccagtcct
catctcagctttgactctgagggtcctacactcaaagtggaggaacacactttccgcatg
tttgacaaagttaaagtaacaatcagcctggacgcttccaacatacagcatcaaaggatc
agaatggcgctcattgaaccggtgatccctggggttagtgtacctgtgcctgagtccgaa
ccagaggccaaaaaacccaagcttgactgctga
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