Sinocyclocheilus grahami (golden-line barbel): 107556716
Help
Entry
107556716 CDS
T04918
Name
(RefSeq) zinc finger CCCH domain-containing protein 13-like isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgh03019
]
107556716
Messenger RNA biogenesis [BR:
sgh03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
107556716
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-CCCH_DUS3L
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
107556716
NCBI-ProteinID:
XP_016095386
LinkDB
All DBs
Position
Unknown
AA seq
1748 aa
AA seq
DB search
MSKIRRKVTVENSKTISDSSSSTTTPSRRPSVFERLGPSTASNAAETHCRNWLKTGNCSY
GNTCRYTHGTPSRGKGFSGTFNRSAERHTGDLRERMKNKRQDVDGDTQKRDTDEPTSPIT
RQRDSSRGRRREKEDIKITKERTPASEEETADWEASREDSDNGDYELSLEMKRQKIQREL
MKLEQENMDKREEIVIKKEDPVPKTRTSNSSKDRASPERSSSKGSPSSRKSSSPKHRAGK
GGNSSKKEKKSSTSSVISSPVSDQTRAEETDSRSSKSGHGKRKGPRTPSPPPPVPVENPV
TGKKHKNKHKNKEKCEDKLKEGKERGRDTEKHKEKKEKRRDRSDSSHKAKRSITSAERSG
SLSPPSREVSPPARRRSSSPKSTSQKQSSQQRSRTPPRHRRSPSPPSRLHHSPSSRSGSS
AQRHSPSPRHRRGSISPLYRDLPPPSSSSPPPTQSSRRSRSPLTPQRDTSPTPGPRRSSP
SARHRSQGGERGRSERDRSPALQERRHERRDESRGKREKDSNRDERDYEIEQSSSRDDRD
ARDGRDRRGERDRRDVREERQHRGEAKDTRDTRAGEPRDRSGRESLERRERDRDRERERE
RNETTAQEERNYGRGHGREELRNDSRVDNRNESRAERTGRGRGRGDATEKGSVRGGRASQ
ADTSSASGHDSWESRSSGLRERSSERNTDRDRYDNDRQRGEQPRDERRGGHVERDRRDIR
EREQRASTPVRQQNRGEDLDREERKDDRRDERRDDRMREREKDRDREREREREREKERER
EKEREREAERERERAKEREREREREKEREREREEREREREREREEREREREEREKERERE
RKEREREREQRERERQREWDEREKGREERRDRREESRDDRSTRDAHEERKNTRKRHRAEN
TPSPRPSPKRGRDVSPADSDGYNSTEEKGDKHRLLSQVVRPQETARSPAHSFTDDKHNRW
KDDDRRVDKKESRGRHEEGDSRGGRGAERREEHAPDISATGISDSRRGKEQRDLPTAALT
PPPPPIEDRDSLSAVHEEGKKKTKSQKKNLKKNRKEEESGGGDRSNPEPPSSSVAEAPQA
LLSPRKTAKKKALERKRKRSLGPESDVSEDELVAQHPLSKRRRGPRTPPPINKDDLPSQR
ALMAGPSSLSAKMDANFSDWSDEDVPERGETTSASLPSDRPPERLLPSERPPRRGARGGG
RDRTDPPIAPLLPDPPMLIQSLPLQPLLPQHMLRKPPQADMQQQRSSSMGSNQSRASSRR
LRSPSNESAHRDEGPQGLRPRRGLMQGGNSREREREREWERERERDRERAAASEQMGGER
KSRIDQLRRGEPSRSTSSDRQDSRSHSSRRSSPESERQARSRAGSYDSRERERDRDQLDR
EREKKDHRQMQNQQTQQRDWDPEPREWGGRGREPLLRGSREPIRERDLREMRERLLPEGL
LAHERMDRERGERDRERERERMLPFDLQAHREPKSRSETKMERGEYEPLLPREALMDVDK
PADNSHLQVEASEPKMDSLDEEEDGKGDDAQSAVSDGEEYEPISDDELDEILADSQKRDE
QQDDEKISGPLDVIDVDWSSLMPKQKQELRTPGAALLRFTPGAVLLRAGVSRRLAGPQLL
ARVKEVCSRELEDPKDADKLLEHDLGALNMAAYNRRMERANLLRSQGPCCKALCARRDIA
IRKQLLKNDKGTTKQIYTSAPVVDSELVQLSLRLFKKKMASSLSSGQEKTDSASAAQQLS
TPAELCVS
NT seq
5247 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaatcaggcggaaggttacagtggagaattcgaagaccatatcggacagcagc
agtagcacgaccaccccctcccgcaggcccagcgtgtttgagagactcggacccagcacg
gccagtaatgcagcagagactcattgtagaaactggttaaagactgggaactgcagttac
ggtaacacgtgtcgatacacacatggaaccccatcacgaggaaaaggcttctctggaaca
ttcaacaggtcagctgagaggcacactggggatctccgggagaggatgaagaataagaga
caggatgtagatggtgacactcagaaaagagatacagacgagcccacttcacccataacc
agacagcgagattcatcccgaggcagacgcagagagaaagaggatattaaaatcacaaag
gaacgcactccagctagtgaggaagagaccgcagattgggaagccagtcgtgaagattcc
gataacggtgattacgagttatctcttgagatgaagagacagaagattcagcgagagctg
atgaagctggaacaggagaacatggacaaacgagaagagattgtcatcaagaaagaggac
ccagtccctaagaccaggacgagtaattcttcaaaggatagggcttcccctgagcgcagt
agttctaaggggtcaccctcgtcgcgtaaatccagctcacccaaacatagagcaggaaag
ggtgggaactccagcaagaaagagaagaagtcctccacttcctcagtcatctcctctcca
gtgtctgaccagaccagggcagaggagacagacagcaggtcatctaagagtggccatggc
aaaagaaaagggccacgaacgcccagtcctccaccacctgtccctgtggagaacccagtg
actgggaagaagcacaaaaataaacacaagaacaaggagaaatgtgaagacaaacttaaa
gaaggcaaagaacgaggacgagatacggagaaacacaaagagaaaaaggaaaaacgcagg
gatcggtcagatagttcccataaagccaaacgctcaataacatcagcggaacgttctgga
agtctttccccaccctccagggaagtgtcacccccagccagaaggaggtcatcctcccct
aaatccacttcccaaaaacagtcctcgcagcagaggtctagaactccaccccgtcaccgc
cggagcccctcccctccctcccgactgcaccactccccatcttcacgctctggctcctca
gcccagagacactccccatctcctcgccacagacggggttctatctctcctctttaccga
gaccttcctcctccatcctcatcctcaccacctcccactcaatcctcacgtcgctcccgc
tctccgctcaccccgcagagagacacttcaccgacacccggtcctcgcaggtccagcccc
agtgcccgtcaccgctcccagggtggggagagggggagatcagagcgagacaggagtccc
gcactgcaagagagacggcatgagcgcagagatgagagccgcggaaagcgtgagaaagac
agcaaccgtgacgagcgagactatgagatcgagcagagctcttctcgagatgaccgtgat
gccagggatggccgagaccggcgtggtgaacgggatagaagagatgtccgggaagagcgc
cagcaccgcggggaggccaaagacactcgggatacccgcgcaggagaaccgcgagaccgc
tcgggacgagaatccctggagcgtagagagagagaccgggaccgagaaagagagagggaa
cgaaatgaaacgacagcccaggaggaaaggaattatggaagaggacatggaagggaggaa
ttgagaaatgacagtagagtggacaacaggaacgaatctcgggctgaaagaacaggcaga
ggcaggggccgtggggatgccacagagaaaggttctgttcgtggtggtagagcgtcacag
gctgacactagcagtgctagcgggcatgacagctgggagtcccgcagcagtggtctgaga
gagaggagctcagagagaaacactgatcgtgatcgctacgataatgacagacagagaggg
gaacagcccagagatgaacggcggggaggacatgtagagagagaccgacgtgacatcaga
gaaagagaacaaagagcatccactcctgtccgccagcaaaaccgcggtgaggaccttgat
cgtgaagagagaaaagatgatcgaagggatgaaagacgtgatgaccgcatgcgtgagaga
gagaaggacagggatagagaaagagagagggaacgggaaagagagaaggagagagagagg
gagaaagaacgggaaagagaggctgaaagagaacgtgaaagagccaaggagagagagcgg
gagagggagagggaaaaagagcgagagagggagagggaggagagagaaagagagcgggaa
agagaaagagaggagcgggaaagggagcgagaagagcgggagaaagaaagggaacgagag
aggaaggagagggaacgggaaagggagcaaagagagagggaacggcagagggagtgggac
gagagagaaaaagggagggaagagaggcgggaccgaagagaggagtcgcgagatgaccgc
tccacccgagatgctcatgaagagagaaagaacactcgtaagagacatcgtgctgagaac
actcccagtccacggccatctcctaaaagaggtcgagatgtgagccctgcagacagtgac
ggttacaacagcactgaggagaaaggcgataagcaccgactgctgagtcaagtggttcgt
cctcaagaaactgcccgctcgcctgcccactcctttactgatgataaacacaaccgctgg
aaggatgatgaccgtcgtgtggataaaaaagaaagccgtggccgacacgaggagggggat
tcccgcggtggaagaggagcagagcgacgtgaagaacatgctccagacatttctgctacg
ggcatttctgactctagaaggggaaaagagcagagggacctccctactgccgccctcact
cctcctcctcctcctatagaggacagagactctttatcagccgttcatgaagaggggaag
aaaaagactaaatctcagaagaaaaatctgaagaagaaccgtaaagaggaggaatctggc
gggggggaccgtagtaaccccgagcccccgtcctcctctgtagctgaagccccccaggct
ctcctgtcacctcgcaagacagccaagaagaaagccttagaaaggaagcgcaagcgctca
ctgggtccggagtcagatgtatctgaggatgagctggtcgcccagcatcccctcagcaag
aggcgacgaggcccacgtacacctccgccaatcaacaaggatgaccttccttcccagagg
gctttaatggctggaccgagttctctctctgctaaaatggatgccaacttcagtgactgg
tctgatgaggatgtaccagagcggggcgagacaacttctgcctccctgccatccgatagg
ccaccggagcggctgcttccctctgaacgtccccctagaaggggtgcacgtggtggcggc
cgggaccgtacagacccccccatcgccccgctgctccctgaccctccaatgctgatacag
tctcttcctttacaaccattactgccacaacacatgctgcgtaaaccaccccaagcagac
atgcagcagcagcgcagcagtagcatgggcagtaaccaaagccgtgcgtcttcgagaagg
ctacgctcgccctccaatgagtcggcccaccgtgatgaaggccctcagggactcaggccc
cgcagaggactcatgcaaggtggcaattctcgggagagagagcgagagagggaatgggaa
cgggagagggagagagaccgggagagggcagcggccagtgaacagatgggaggagagagg
aagtcgaggattgatcagctccggagaggagaacctagtcgaagtacttcctcagaccga
caggactcccggagtcacagttctcgtcgtagttcaccagagtctgagcgtcaggctcgc
tccagagccggctcctacgacagccgtgagcgggaacgagatcgtgatcagttggatcga
gagcgtgagaaaaaggatcaccgtcagatgcaaaatcaacaaacccaacagcgagactgg
gacccagaacctcgtgagtggggtgggcggggcagagagcccctcctccgtggcagccgt
gagccaattagagagagagacttgcgggagatgagggaacgactcctacctgaagggttg
ctggcacatgagcgaatggatcgtgagcgtggtgaaagggaccgtgagcgtgaacgggaa
aggatgcttccgtttgaccttcaggctcacagggaaccaaagagcagatctgaaactaag
atggagaggggagagtatgagcctctgttacccagagaagccctcatggatgtagataag
ccagccgacaactcacacctgcaagtggaagcatctgaacccaaaatggatagtcttgat
gaagaggaggatggaaagggggatgatgcacagtctgctgtctcagatggtgaggagtat
gagccaatcagtgatgatgaactggacgagattctggctgacagtcaaaagagggacgaa
cagcaagatgatgaaaagatttctgggcctctagatgtgattgatgtagattggtccagt
ttgatgcccaagcaaaaacaggagctcagaactcctggggcagctcttctccgattcacc
ccgggggctgttttgctcagagcgggagtgtccagacgcttagctgggcctcagctcctt
gccagagttaaagaagtgtgttccagagagctggaagaccctaaagatgctgataaactc
ttagagcatgatctgggtgctctgaacatggctgcatacaacagaagaatggagagggcc
aacctactgaggagccagggcccttgctgcaaggcactgtgtgctcgcagagacattgcc
atacgtaaacagctcctgaaaaacgacaagggcacaaccaagcagatctacaccagtgct
ccagtggtggacagtgaacttgtgcaactgagtttacgtctctttaaaaagaaaatggct
tccagcctgtccagtggacaggagaagaccgattccgcctctgcagcccaacagctcagc
acaccagcagagctgtgcgtctcctga
DBGET
integrated database retrieval system