Sinocyclocheilus grahami (golden-line barbel): 107556936
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Entry
107556936 CDS
T04918
Name
(RefSeq) retinoic acid receptor RXR-alpha-A-like isoform X1
KO
K08524
retinoid X receptor alpha
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03320
PPAR signaling pathway
sgh04148
Efferocytosis
sgh04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107556936
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
107556936
03320 PPAR signaling pathway
107556936
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgh03000
]
107556936
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sgh03310
]
107556936
Transcription factors [BR:
sgh03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
107556936
Nuclear receptors [BR:
sgh03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
107556936
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
107556936
NCBI-ProteinID:
XP_016095688
LinkDB
All DBs
Position
Unknown
AA seq
498 aa
AA seq
DB search
METKPFLSLGFLKPHCSMPPQRGRAEACTCFSGMCALHQRRLSTDCSGQMTSSPLSSPTS
HRGMHPSLLSPTSLGHSGSLHSPISTLSSPMNGLGSPFSVISSPMGPHSMVSPGMGYGPS
ISPQLNSPMNSVSSSEDIKPPLGINGVMKVPVQPLGTPLSLSKHICAICGDRSSGKHYGV
YSCEGCKGFFKRTVRKDLTYTCRDSKDCIIDKRQRNRCQYCRYQKCLAMGMKREVLLHTA
VQEERQRAKDRNENEVESTSSVNEDMPVEKILEAELAVEPKTETYIETNVPMPSNSPNDP
VTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSISVKDGI
LLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLS
NPGEVEALREKVYASLEAYCKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGD
TPIDTFLMEMLEAPHQMT
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccaaacctttcttgtcattggggttcctgaaaccccattgctcgatgccacct
cagagaggacgagcagaagcatgcacgtgtttcagcggaatgtgtgctcttcatcaacgc
aggctttctacagactgctcgggacagatgacgtcctctcctctcagctctcccacatcc
caccgggggatgcacccatcactgctgagcccgacttctttaggccactcagggtctctg
cactcccccatcagcactctgagctcacccatgaacggcctgggctctcccttctctgtc
atcagctcacccatggggccacattccatggtgtcacccgggatgggctacggccccagc
atcagcccacagctgaactcgcccatgaactctgtcagcagctcagaagatatcaagccg
cccctgggcatcaacggtgtgatgaaggtgccagtccagcccttgggcacccccctttcc
ctctccaaacacatctgtgccatctgcggcgaccgctcctcaggtaaacactacggtgtg
tacagctgcgaggggtgcaagggtttcttcaagaggactgtgcgtaaggacctgacttac
acttgtcgagacagcaaggactgtattatcgacaagcgccagcgcaaccgctgccagtac
tgccgctatcagaagtgtttggccatgggaatgaagagagaagtgttgttacatacagcc
gtccaggaggagcgccagcgagccaaggaccgcaacgagaacgaggtggagtcgaccagc
agtgtgaacgaagacatgcctgtggagaagatcttggaggcggagcttgctgtggagccc
aagacggagacttacattgaaaccaatgtaccaatgccctcgaattcacccaatgatcca
gtcacaaacatctgtcaggccgcagacaagcagctcttcactctagtggaatgggccaag
aggatcccgcatttttcagagctcccgctggacgaccaggtcattcttctacgagcagga
tggaatgagctcctcattgcgtcattttcacaccgttcaatatcagtgaaagatgggata
ctgttggccacaggattgcatgtgcaccggaacagcgcccacagcgccggagtaggagcc
atatttgacagggtgctgacggaattggtgtcaaagatgagagacatgcagatggataaa
acagagctagggtgccttcgagccatcgtcctcttcaacccagactccaaaggcctgtca
aacccaggtgaggtggaggcgctgagagagaaggtctatgcctctctggaagcctactgc
aaacagaagtaccctgaacaacctggaaggtttgctaagctgttgctgcggctccctgcc
ctgcgttccattggactgaaatgtttggagcatctgttcttcttcaagctcataggagac
acgcccatcgataccttcctcatggagatgctagaggcgccccaccaaatgacataa
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