Sinocyclocheilus grahami (golden-line barbel): 107557147
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Entry
107557147 CDS
T04918
Symbol
pcdh9
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
107557147 (pcdh9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sgh01009
]
107557147 (pcdh9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sgh04515
]
107557147 (pcdh9)
Protein phosphatases and associated proteins [BR:
sgh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107557147 (pcdh9)
Cell adhesion molecules [BR:
sgh04515
]
Cadherins
Protocadherins
107557147 (pcdh9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
MAP17
Cadherin_4
RCR
UTP20_C
EphA2_TM
DUF6377
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
107557147
NCBI-ProteinID:
XP_016095967
LinkDB
All DBs
Position
Unknown
AA seq
1238 aa
AA seq
DB search
MDLRDFFLLATLVACFWLDPTIAQELIYPIREELQENVLIGNIPKDLNISHMNSATAATS
NLVYRLVSKAGDTPLLRVMSNTGEIFTTSNRIDREKLCPGSSFEDSECSFEIEVVILPND
YFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGPNSVHKYEL
LNGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKVKVEDGGNPQKSSTAILQVT
VTDVNDNRPVFKESQIEVHIPENSPVGTSVVQLQATDADVGANAEIKYMFGAQVSPATRR
LFSLNSTTGLITVQRPLDREETAIHKLTVLASDGSSSPARATITINVTDVNDNAPNIDLR
YIISPTNGTVMLSEKDPINTKIALITVSDKDTDVNGKVICFIEKDVPFHLKAVYDNQYLL
ETSALLDYEGTKEYIFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMEN
NQRDMFLTTISATDEDSGRNAEIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFLFT
VTARDNGTRALQNQAAVIVTILDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADA
GENAVVRLSILNDNENFILDPDSGVIKSNVSFDREQQSSYTFDVRAVDNGSPPCSSAAKV
TINVIDVNDNPPIVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDGDTGMNAELKYTIVSGN
TRSLFRIDPVTGNITLEEKPTVADIGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTVGNS
SYIHDLIRRTMETPLDRNIGESSETYQNVDNLKTIIAIVTGAMVVIVVIFITVLVRCRNA
SQFKAAQRKKQGTEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEENKPDDSAHEPIN
GTISLPAELEEPGIGRFDWNATPTTTFKPSSPDLARHYKSASPQSAFHLKADTPVSVKKH
HVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKSKGAPLHTRQGTLTRART
ELNPDYLDLRSRAELNPEYWTPCTPLSQRRVTFHLPDGSQESCSDSGLGDHEPVGSGLLL
SHPLPLVQAQDEFYEQASPDKRTEADGNSDPNSDGPLGPRGLVEATEMCTQECLVLGHSD
NCWMPPSLSSYPSPKSPVSSFNNQKEWSKERLLNGHTLTRSWKGERGSQEQFGDRKTFGS
SEGHFGSGGGGHMADIPLASLKSYQPVSGPNSPKEQQL
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atggatttaagggattttttcttgttggcaacattagttgcttgtttctggttagatccc
accatagcccaagagctcatttaccctattcgagaagagctacaggagaatgttcttatt
ggaaacattccaaaggacttgaacatctcccatatgaactctgccaccgcggctaccagt
aatctggtttaccggcttgtgtcgaaagcaggtgacaccccactacttagagtgatgagc
aatacaggagaaatatttaccacctccaaccgtatcgacagggagaaactctgtccaggc
tcctcttttgaagacagcgagtgttcctttgaaattgaggtggtcattttgcccaatgac
tatttcagattaatcaaaattaaaatcatcgtcaaagacaccaatgacaatgcccccatg
ttcccctcgcctgtgatcaacatttcaattccggaaaacacactcatcaacagccgcttt
gctattccctctgccactgatccagataccggtcccaacagcgtacacaaatacgagctg
ttgaacgggcagagcgccttcggtttggatattgtggagacaccagagggtgagaaatgg
cctcagcttatcgttcagcagaatttagatagagaacagaaagatacttatgtgatgaaa
gtcaaagtggaggatggggggaacccacagaaatccagcactgccattctacaggtgact
gtcactgatgttaatgataaccggcctgtcttcaaagaaagtcaaattgaggtccacatc
ccagaaaattctcccgtcggcacatctgtagttcagctgcaagccactgatgcagacgtg
ggtgccaatgcagaaataaagtacatgtttggggcccaggtgtctccagcgacacggaga
cttttttctctgaactccaccactggactcataacagttcaaaggccgcttgatagagag
gagaccgccattcataaactcacagtactagccagcgatggaagctcgagtccagcaaga
gccaccatcactatcaatgtgactgatgtgaatgacaacgctccaaacattgacctgaga
tacatcatcagtccaactaatggtactgtaatgctttctgaaaaagatccaattaacacc
aagatcgccctcattactgtatctgacaaagacacagacgtcaacggcaaggtgatttgc
ttcattgaaaaagatgttccatttcacctcaaagcagtttatgataaccagtatttgtta
gaaacatctgcactgcttgattatgaaggaaccaaggagtacatcttcaagattgttgct
tctgactctggaaaacctagtctgaaccagaccgccctggttagagtacggctggaggat
gagaatgacaatccacccattttcacccagcctgtcattgagctggctgtcatggagaac
aaccaacgtgacatgttcctgacaaccatcagtgccacagatgaggacagtggacggaat
gcagagattgtctaccagcttggacccaacgcatcattttttgatcttgaccgcaaaaca
ggagtgctaaccgcatccagggtgtttgatagggaggaacaagagcggttcctctttacg
gtcaccgctagggacaatggcaccagggctctgcagaatcaagctgcagtcatagtgacc
atactggacgagaatgacaatagccctaaatttacacacaaccactttcagttctttgtg
tcagagaatctgcctaaatatagtacagttggagtaatcacagtcacagatgcagatgct
ggtgagaatgccgtggtgagactctcaatccttaacgataatgagaacttcatccttgac
ccagattctggagtcataaagtccaatgtatcctttgaccgagagcagcaaagctcctac
acctttgacgtcagagctgtggacaatggaagccctccatgttcgtcagctgccaaggtg
accatcaatgtcattgatgtcaatgataacccccccatcgtcatctacccaccatcaaac
acctctttcaaactagtgccactgtctgcgattccgggatcggttgtggctgaggtgttt
gcagtagatggcgatacgggtatgaatgcagagctcaagtacactattgtgagtggcaac
acaagaagtcttttcagaattgaccccgtaacaggaaacatcacgttagaggagaaaccc
acggtggcagacattggcctccacaggctggtggtcaacatcagtgacctaggctatcca
aagtccctgcacactcttgtcctagttttcctgtacgtaaacgacacggttggaaattcc
tcatacatacatgacctcatccgtcggacaatggaaacgccactggataggaacattggc
gagagcagtgagacttatcagaatgttgacaacctaaaaaccatcattgccattgtgaca
ggcgctatggtagtgattgtggtcatcttcataacagttctggtgcgctgccgaaacgcc
tcacagttcaaggcggctcagagaaagaagcagggtaccgagtggatgtcacccaaccag
gagaacaagcaaaacaagaagaagaagcgcaaaaagaggaagtcgccaaagagctccctc
ttgaactttgtcaccatcgaggagaacaaacccgacgactctgcccacgaacccataaac
ggaaccatcagtctcccggctgagctcgaggagcccgggattggacgctttgattggaat
gccacccctactaccaccttcaaacccagcagcccagacttggcccggcactacaagtcc
gcttcaccccagtcggccttccacctcaaagctgacactccggtgtctgtgaaaaagcat
catgtgatacaggagctgccactggacaatacctttgttgggggctgtgacacgctttcc
aaacgttcctccaccagctctgatcacttcagtgcctcagaatgcagttcacaaggaggc
ttcaagtcaaagggggcacctttgcacaccagacagggaacgcttacccgcgcccgcacc
gaactgaaccccgactatctggaccttcgctctagagccgagctgaacccagagtactgg
acgccctgcactcctctatcacagcggcgcgtcacgtttcacctgccggacgggtctcag
gaaagctgcagtgacagtgggctgggggaccatgagcctgtgggaagtgggctgctcctc
tcacaccctcttcctctggtgcaggcgcaggatgagttctacgagcaggcctctccggac
aagaggaccgaagcggacggcaactcggaccccaactctgatggacctctaggaccaaga
ggcttagtggaggccacagagatgtgcacccaagagtgtctggtgttgggccactccgac
aactgttggatgccgccgagcctgagctcgtacccttcgcccaagtcccctgtttcttct
ttcaacaaccaaaaggaatggtctaaagagagactgctaaatggccacaccctgacccgc
agctggaaaggtgagcgcggaagccaggagcagtttggggacaggaagacctttgggagc
tcggagggacattttggcagtggcggcggtggtcacatggccgacatcccattggccagc
ctgaaatcttaccagcccgtctccggccccaacagtcctaaagaacagcagctttaa
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