Sinocyclocheilus grahami (golden-line barbel): 107557476
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Entry
107557476 CDS
T04918
Symbol
dhx35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sgh03041
]
107557476 (dhx35)
Enzymes [BR:
sgh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107557476 (dhx35)
Spliceosome [BR:
sgh03041
]
Complex C
Other components
Complex C specific factors
107557476 (dhx35)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
AAA_22
ABC_tran
Cas3-like_C_2
FtsK_SpoIIIE
AAA_29
nSTAND3
AAA_30
AAA_23
Motif
Other DBs
NCBI-GeneID:
107557476
NCBI-ProteinID:
XP_016096386
LinkDB
All DBs
Position
Unknown
AA seq
543 aa
AA seq
DB search
SVSLSGSEAPGVCEERDLCTDTAGSPIIYNPHTALSIEKQRQRLPVFKHRNNILYLVESF
QTVVIVGETGSGKSTQIPQYLLEAGWAADGKVIGVTQPRRVAATSVAGRVAEERGAYLGH
EVGYSIRFDDCSDPHATRIKFLTDGMLVREMMSDPLLKKYSVIMLDEAHERTLYTDITIG
LLKKIQKKRRDLRLIVASATLDAKKFHDFFDLNESGDPNKDTCAILTVEGRTFPVDIFYT
VSPVPDYVKATVETVMKIHETEDDGDVLAFLTGQEEVEKVVSMLQEQARTLSRYGMKKHL
CVLPMYAGLPYNEQMRVFERMPPTVRKVVVATNIAETSITINGVVFVIDCAFVKLRAYNP
RTAIESLIVTPISKASACQRAGRAGRNRAGKCFRLYTGTVRSYKFLTVIHRNSPLSNVVS
VCHYMTVFGMCSVISHSSVCAAGDPDVILRCIVSGFFANAARMHHSGSYRTLRDDRELFI
HPDSVLYGEKPPKWVVFNEVVQTSKYYMRDVTAVESSWLVELAPHFYKQAKHGSLNSKRA
KVF
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
tctgtgtctctctcaggctcagaggctccaggtgtgtgtgaggagagagatctgtgcact
gacaccgccggctcccccatcatctataacccacacacggcgctctccatagagaaacag
aggcagaggctgcccgtcttcaagcacagaaacaacatcctgtatctggtggagagtttc
cagactgtggtgattgttggagaaacaggatctggaaaaagcacacaaatcccacagtat
ctgctggaggcgggatgggcggcggacgggaaggtgatcggcgtgactcagccacggcga
gtggctgccacatctgtggccggtcgcgtggcagaggagcggggggcgtatctggggcat
gaggtgggctacagcatccgcttcgatgactgctctgacccgcacgccacacgcattaag
tttctgacggatgggatgttggttcgggagatgatgtctgacccgctgttgaagaagtac
agtgtgataatgctggatgaagctcacgagcgaacactttacactgacatcaccatcggc
ctcctgaagaagattcagaagaagcgcagagacctgcgtttgatcgtagcttcagccact
ttggatgccaagaaattccacgatttcttcgacctaaatgagtctggagacccaaataaa
gacacctgtgcgattctgacggtggagggccgaactttcccggtggatattttctacact
gtcagtcctgtgccggactatgtgaaggctacggtggaaaccgtgatgaagatccacgag
acggaggatgatggagatgtgctggcctttctcacaggacaggaagaggtggagaaggtg
gtgtctatgctccaggaacaggcccggactttgtcccgttacgggatgaagaagcacctg
tgtgtgctgcccatgtacgcgggcctgccctataacgagcagatgagagtgttcgagagg
atgccccctactgtcagaaaggtggtggtcgccaccaatatagccgagacgtccatcacc
attaacggagtggtgtttgtgatcgactgtgcgtttgtgaagctgagggcgtataatcca
cgcacggcgatagagtcactgatcgttacgcccatctctaaagcctccgcctgtcagaga
gccgggagagccgggagaaaccgtgcagggaagtgtttccggctctacacaggtacagtg
cggtcatacaaatttctaacggttatccaccggaactctccgttatctaatgtcgtatca
gtgtgtcattacatgactgtatttggtatgtgttcagtgatttctcactcttctgtctgt
gctgcaggtgatccggatgtgattctcagatgtattgtgtctggtttttttgcgaatgcc
gcccgaatgcatcactccggctcctacaggactctccgtgatgacagggaactgttcatt
caccctgattcagtgctgtatggagaaaagcccccgaaatgggtggtcttcaacgaggtg
gttcagaccagcaagtactacatgcgtgacgtgacggcggttgagtcctcctggctggtg
gagctggcacctcacttctacaaacaggccaagcacgggtctctgaacagcaagcgggcc
aaagtcttctga
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