Sinocyclocheilus grahami (golden-line barbel): 107557818
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Entry
107557818 CDS
T04918
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107557818
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sgh04121
]
107557818
Enzymes [BR:
sgh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
107557818
Ubiquitin system [BR:
sgh04121
]
Ubiquitin ligases (E3)
HECT type E3
107557818
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
Motif
Other DBs
NCBI-GeneID:
107557818
NCBI-ProteinID:
XP_016096854
LinkDB
All DBs
Position
Unknown
AA seq
1745 aa
AA seq
DB search
MSNRPNSNPGGSLRRSQRNTAAAQPIDHTLAGRLQPEQVNQKANFPPESRRSNSKASKAP
PSSAVGSARGHASRRNSLSLSVGSHSIPDPDLEAAGTSSQQGRREGSSTRALKRSSALEP
NITFSPSPPKRPKAVSSHLLESSSSGPSAPTTSPEVTEPRKAPASVSTKSKKRRLAAEPA
PARALSKKSTSYPGPSGASIPPSQKRKKAGASSLSSSSPSSLPSSSSAAGPLPPRSEASR
AAKPTKLASKSAASAKAGCSTVTDSSSSASSSSSSSSSSSAATGANSCAPQGARLKQGKD
QSKARRSRSASSPSPRRSSRDKEQSKAAGSSKFDWTSRFNSKVNLPKPKLSLPASAKAET
SSKPGPSGLQAKLASLRKSTKKRSESPPAELPSCRRSTRQKTTGSCASTSRRGSGLGKRG
AAESRRQDKMADSDNNQDGANSSAARTEETPQGASASSSVAGAVGMTTSGESESDDSEMG
RLQALLEARGLPPHLFGPFGPRMSQLFHRTIGSGASSKAQQLLQGLQATGDESQQLQAAI
EMCQLLVMGNEETLGGFPVKSVVPALVRGHLEVRREDARAQLMKEDPELAKCFIKTLFGV
LYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLRNHAVSSHIASMLSSQDLKIVVG
SLQMAEILMQKLPDVFSVYFRREGVMHQVKNLSESEVFLISPPKACTSGTASLCTTTITT
ATTTAASNVTPDLGSPSFQHSMDDSLDLSPQGRLSDVLKRKRLPKRGPRRPKYSPPRDDD
KVDNQAKSPTTTQSPKSSFLASLNPKTWGKLGTQTNSANSEPSRTAGVSGLARVPPKDSV
SNNRDKIKAWIKEQASKFVERYFNSESVDGSNPALNVLQRLCTATEQLNLQVDSGVECLE
EISSIVSESDVSSFEIQHSGLVKQLLLYLTSNSERDTISRDERIKRFLHVFFGCPIPGQE
PLGRLDLTENGPLLALVHKMNNCLSQMEQFPVKVHDFPSGNGNGSRGSQALKFFNTHQLK
CQLQRHPDCTNVKQWKGGPVKIDPLALVQAIERYLVVRGYGRIREEDEDSDDDGSDDEID
ESLAAQFLNSGSVRHRLQFYIGEHLLPYNMTVYQAVRQFSLQAEEERESTDDEANPLGRA
GIWTKTHTIWYKPVREDEEGCKDAVGGKRGRAQTAPTKTSPRNAKKQDELWHEGVCPSVT
NLLESYLISDPPEGITFDDPSMEVILLLRVLHSISRYWFYLYDNAACKEIIPIGEFINSK
LTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFFPFDTRQMLFYVTAFDRDRAMQRLLD
TNPEINQSDSQDSRVAPRLDRKKRTINRDELLKQAESVMQDLGSSRAMLEIQYENEVGTG
LGPTQEFYALVSQELQRADLGLWRGEEVSLSNPKGSQEGTKYMFSSRGLFAVPFGRTTKP
AHIAKIKMKFRFLGKLMAKAIMDFRLLDLPLGLPFYKWMLRHESSISSHDLVNIDPGVAK
SIQHLEDIIRQKKRIEQDRSHTRETLLQALESLNMNGCSVEDLGLDFTLPGFPNIELKKG
GKDVPVTIHNLEEYLRLVVYWTLNEGVSRQFESFREGFESVFPLQHLQCFYPEELDQLLC
GSKSESWDVKTLMECCRPDHGYTHDSRAVRFLFEVLSSFDAEQQRLFLQFVTGSPRLPVG
GFRSLNPPLTIVRKTFELTENPDDFLPSVMTCVNYLKLPDYSSIEIMREKLLIAAREGQQ
SFHLS
NT seq
5238 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaatccaggggggtcactgcgccgttcacagaggaacaca
gccgcggcccagccaatagaccacacacttgcaggaaggttgcagccagagcaagtaaac
caaaaagcaaatttcccacctgaaagtagaagatctaattctaaggcttccaaagcccca
cccagctctgccgtcggctccgcccgcggccacgcttctcgaaggaacagcctctcttta
tccgtgggttcacactcgattccagatccagacttggaagcagcagggacttcaagccag
caggggagacgggagggcagcagtacccgtgctctcaaacgcagctccgctttagagccc
aacatcaccttttcgcccagcccacccaagcggcccaaagcggtgtccagccaccttttg
gagagttcatccagtgggccatcggcccccacaacctcacctgaagttacagagccgagg
aaggctccagcgtctgtcagcaccaagtccaaaaagagacggttagcagccgagccggct
cccgccagagccctgagcaagaagagcacgtcctatccaggccctagtggggcctcgatc
cccccctctcaaaagcgcaagaaggcaggcgcctcttcattgtcgtcctcctctccttcc
tccctccccagctctagcagtgcggcaggccccctgccaccccgcagcgaggccagccgg
gcagccaaacccaccaagctggcgtccaaatcggccgcctcagccaaagctgggtgtagc
accgtgactgactcctcttcctctgcctcttcctcgtcctcctcatcctcttcctcctcg
gctgccacaggcgccaacagctgtgcccctcagggtgcccgactaaagcagggcaaggac
cagagcaaagcgcggcggtcacgctccgcatcctccccatctccccgaaggagcagccgg
gataaagagcagagcaaggctgctggctcctccaagtttgactggacatcccgcttcaac
tccaaagtcaacctgccaaagcccaaactgtccctgccggcatcggccaaggctgagacc
tcctccaagcctgggccctccggactgcaggccaaactagcaagtttgaggaagtctact
aagaagcgtagtgagtctcccccagcagagctccccagctgtcggaggagcacacgtcag
aagaccacgggctcttgtgccagcaccagtcggcgaggctcaggcctgggcaagcgtggg
gcagccgaatctcgccgacaggataaaatggccgactccgacaacaatcaggatggggcc
aattcatcggccgcgcgcacagaggagacaccacaaggggcgtcagcgtctagctcagtg
gctggagctgttggcatgaccacctctggagagagtgaatcagatgactctgaaatggga
agactgcaagctctactggaggccaggggtcttcctcctcacctgtttggcccatttgga
ccccgtatgtctcagctgtttcataggaccatcgggagtggagctagctcaaaggcacag
cagctgctgcaggggcttcaggctacaggagacgaatcccagcagctccaggctgctata
gagatgtgccagctgctagtgatgggtaatgaggagacactgggaggattccccgtcaag
agcgtcgtacctgccctggtgagagggcacttggaggtgcggcgagaggacgcacgagct
cagctgatgaaagaggaccctgagctggccaagtgcttcataaagactctgtttggggtt
ctgtatgaggtgtacagctcctcagccgggcctgccgtcagacacaagtgccttagagcc
atcctccggatcatctacttcgcagatgcagagctgcttaaagacgtactgcgcaaccat
gctgtgtctagccacatagcttccatgctgtccagtcaggacctgaagattgtagtcggc
tctctgcagatggctgagatcctcatgcagaagcttccagatgttttcagtgtttatttc
aggcgggaaggtgtaatgcaccaggtaaagaatctatctgaatctgaggtgttcctcatc
agtcctccgaaagcgtgcaccagcggcacagctagtctttgcaccaccaccatcaccacg
gcaaccactacagctgcctctaatgtcacacccgacttaggctcgcccagtttccagcac
agcatggatgactcactggacctcagtccacagggtaggttgagtgatgttctcaaaaga
aagcgccttcctaaaagaggaccaaggcgtccaaagtactccccacccagagacgatgac
aaagtggataatcaggctaagagtccaacaaccacacagtcccccaagtcctctttccta
gccagtttaaatcccaagacctggggtaagctggggactcagacaaacagtgccaactca
gagccctcacgcactgcaggggtcagtggtctggcacgagtgccgcccaaggactcggtt
tcaaacaacagggataagataaaggcttggataaaggagcaagccagcaaatttgtggag
cgttactttaattctgagagtgtggatggaagcaaccctgcactgaacgtcctccaaaga
ctctgcactgccacagaacagctgaacttgcaggtggacagtggtgtagagtgtctagag
gagataagcagtattgtatctgaatcagacgtgtcctcctttgagatccagcacagtggg
cttgtgaagcagctgttgttgtatctgacatcaaacagtgaacgggacactatcagtaga
gacgagagaatcaagaggttcctgcatgttttcttcggctgcccgataccagggcaggaa
cctctggggcgtttggacctaacagagaatggcccactgctggcattggtgcacaagatg
aacaactgccttagtcagatggaacagtttcctgttaaagtgcatgattttcccagtggg
aacggcaacggaagcaggggttcacaagccctcaagttctttaacacacatcagctgaag
tgccagctgcagagacatccagactgcaccaatgtaaagcagtggaagggcgggccggtc
aaaattgaccccttggccctagtacaggctattgagagataccttgtggttagagggtat
ggaaggatcagggaggaggatgaagacagtgatgatgatggttctgatgatgagattgat
gaatctttggctgcccagttcttgaattctgggagtgtacgtcacagactacagttctat
ataggagagcacctgctgccgtacaacatgactgtttatcaggccgtcaggcagttcagc
ttacaggccgaggaggagcgagagagcacagatgatgaagcaaatcctctggggcgggct
ggcatctggaccaaaacacacactatatggtataagccagtcagagaggatgaagagggc
tgtaaagacgctgttggagggaagaggggtcgtgcacagacggctcccactaaaacctcc
cctcgaaatgccaagaaacaggatgaactgtggcatgagggtgtgtgtcccagtgtgaca
aacctattagagtcatacctcattagtgatcctccagagggcatcacttttgatgaccct
tcaatggaggtgattctgctgctgagggtcctgcactccatcagtagatactggttctac
ctgtacgataatgctgcatgtaaggagatcattcccattggtgaatttattaacagtaaa
ctgacagcaaaggccaacagacagttgcaggatccgctggtcatcatgacagggaacatt
cccacctggctcactgagctcggcaaaacctgtccattcttcttcccgtttgacacacgg
cagatgctcttctacgtgactgcgtttgaccgcgatcgtgccatgcagcgtctgctcgac
accaacccagagattaaccagtccgactcacaagacagccgtgttgctccacgccttgat
aggaagaagagaacgataaaccgtgatgagctcctaaagcaagcagagtcagtaatgcaa
gatctcgggagttctagagccatgctggaaattcaatatgagaacgaggtgggaacaggt
ctcggccctacgcaagagttctatgctctggtgtctcaggagttgcagagggccgatttg
ggtctttggagaggagaggaagtctctctttccaaccctaaagggagtcaggagggtacc
aagtatatgtttagttccagagggttgtttgctgttccgtttggacgaactaccaaacca
gctcacatcgccaagatcaaaatgaagttccgttttcttgggaaactcatggctaaagcg
atcatggacttcagattgttggacttgcctctaggtttgccattctataagtggatgctg
aggcatgaatcctccatcagctctcatgatctggtcaacattgatcctggcgttgccaaa
tccatccagcacctggaggacatcatccgccagaagaagagaatagagcaggacagatca
catacacgggagaccctactgcaggccttggagagtctcaacatgaatggctgctcggtg
gaagatctgggcctggacttcactctgcctggattcccaaacatagagttgaagaaaggg
ggcaaagacgtgccagtcaccattcacaacctggaggaatacctcagattggtggtctac
tggacgctcaatgaaggcgtgtctcggcagtttgagtcgtttagggaaggatttgagtct
gtcttccctctgcaacatctgcagtgcttctatcctgaagagctggatcagttgttatgt
ggcagtaagtcagagtcctgggatgtgaagacactaatggagtgctgcagaccggaccac
ggctacacacatgacagccgtgcagtgcggttcttgtttgaggtgctgagcagttttgat
gcagagcagcagagacttttcctgcagtttgtcacaggcagccccagacttcctgtcgga
ggattccggagtttaaaccctcccctcactatcgttcggaagacgttcgagttgacggag
aacccggacgacttccttccgtcggtgatgacgtgtgtgaactacctgaaactgccggat
tactccagcatcgagatcatgcgcgagaaactgttgattgctgcgcgcgagggccagcag
tctttccatctgtcttga
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integrated database retrieval system
