Sinocyclocheilus grahami (golden-line barbel): 107558033
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Entry
107558033 CDS
T04918
Symbol
smarca2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107558033 (smarca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgh03021
]
107558033 (smarca2)
03036 Chromosome and associated proteins [BR:
sgh03036
]
107558033 (smarca2)
Transcription machinery [BR:
sgh03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107558033 (smarca2)
Chromosome and associated proteins [BR:
sgh03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
107558033 (smarca2)
Chromatin remodeling factors
BAF complex
107558033 (smarca2)
PBAF complex
107558033 (smarca2)
GBAF(ncBAF) complex
107558033 (smarca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
107558033
NCBI-ProteinID:
XP_016097120
UniProt:
A0A672SHD9
LinkDB
All DBs
Position
Unknown
AA seq
1580 aa
AA seq
DB search
MSTPNEPPVGIPHAGPSPGAGLSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVPHAMQG
QGAGDYSQDIHPMHKPMEGMHEKGMGEDMHYGQMKGVGMRSLHSGMGPPQSPMDQHSQGY
MSPHPSPMGQVPEHVPSPMSGGGPTPPQMSQGQSPMMPMDPQGMVQQARGQSAFSPVQLQ
QLRAQILAYKILGRGQPLPENLQLAVQGKRSLPTMQQQPVNTGPYNRPLGMPMTHGGPAT
GPCPSPAMQTHTQSSGPKPWPEGQGSETPGAQQKLSVPAPSGRPSPAPPLAPTGTQPVPY
TSLTSQPQPQPPPGPGQPSLIIQLQQKQNRITPIQKPQGLDPVELLQEREYRLQARIAHR
IQELENLPGSLPPDLRTKATVELKALRLLNFQRQLRLDVVACMRRDTTLETALNSKAYKR
SKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSISGKIQKLS
KAIATWHTNTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYV
ANLTELVYEHRAAQAAKEKKRKRKKKKKETGDAEGMGAIGPDGELIDENSQMSELPVKVI
QTETGKVLQGTDAPKSSQLEAWLEMNPGYEVAPRSDSEESGSEFEEEDDEEVVSRAESEE
KKVIDPNSDEVSETAAKHIIESAKQDVDDEYSVQAGQTSSQSYYGVAHTVIERVDKQSTL
LINGTLKHYQVQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLI
IVPLSTLSNWVNELDKWAPSIVKIAYKGTPSMRRSLVPQLRSGKFNVLITTYEYIIKDKH
ILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFL
LPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQL
PEKVEYVIKCDMSAIQKVLYRHMQGKGILLTDGSEKDKKGKGGAKTLMNTIMQLKKICNH
PYMFQHIEESFAEHLGYPNGIISGPDLYRASGKFELLDRILPKLKATNHRVLLFCQMTTL
MTIMEDYFAFRNFLYLRLDGTTKCEDRAMLLKKFNEEGSQFFIFLLSTRAGGLGLNLQAA
DTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKV
IQAGMFDQKSSSHERRAFLQAILEHEEQNEEEDEIPDDETLNQMIARNEDEFELFMRMDL
DRRREDARNPKRKPRLMEEDELPSWILKDDAEVERLTCEEDDEKIFGRGSRHRRDVDYSD
TLTEKQWLRAVEDGNLEEIEEEIRLKRRKRSRHVDKDLRREDGDKAKKRRGRPPAEKFSP
NPPKLMKQMNAIIDTVINYRDASGRQLSEVFVQLPSRKELPEYYELIRKPVDFKKIKERV
RSHKYRGVSDLEKDVMLLCHNAQTYNLEGSQIYEDSIVLQSVFKSARQKLAREESDDDSN
DDDDDDDEESEEESKSVKVKIRQSNRDERCQDKGKKRPSRGKAKPVVSDDDSEEEQEENF
KREMSSQRGATATMSEEEMS
NT seq
4743 nt
NT seq
+upstream
nt +downstream
nt
atgtccacccccaatgaaccaccagttgggataccccatgctggtccctcaccaggtgct
ggcctgtctccggggcccatcctagggcccagccctggacccggcccctctcctggctct
gtacacagcatgatgggccccagtccagggcccccaagtgtcccgcatgctatgcagggc
caaggggctggagactattcacaggacatccacccaatgcataagcctatggagggaatg
catgagaaggggatgggagaggatatgcactatggacaaatgaagggggtgggcatgaga
tccctgcacagtggcatgggtcctccacagagccctatggatcaacacagtcaaggctac
atgtcccctcatccctcgccaatgggccaggtgccagagcatgtgcctagccctatgtca
ggaggagggccgaccccaccacaaatgtctcagggtcagtcacccatgatgcccatggat
ccacaggggatggtacagcaagccaggggtcagtctgccttcagcccagttcagctacag
caactcagggctcagatcctggcatacaagatcctgggccggggtcagcctctgcctgag
aatctgcagttagcggtgcagggcaagaggagcctccccaccatgcagcagcagcccgtc
aacactggcccctacaacagacctctaggtatgccaatgactcatggagggcctgcaacg
ggcccatgtccctctccagcaatgcagactcatacccagagctctgggccaaaaccttgg
cctgaaggtcaaggctcagagacccccggtgctcaacagaagttgtcggtcccagctccc
agtggcagaccctctccagctcccccgctggcccccactggcacacaacctgtgccctac
acctccctcacctcccaaccccaacctcagccaccaccaggaccaggccagccctccctt
atcatccagcttcagcagaaacagaatcgcatcacaccaattcagaagcctcagggtctg
gaccctgtcgaactcttgcaagagagggaataccgtcttcaggccaggattgctcacaga
attcaggagctggagaatctgccagggtcactgccacctgatctgcggactaaagctact
gtggagctgaaggccttaagactgcttaacttccagcggcagctgaggctagatgttgta
gcctgcatgcgccgagacacaactctagagacggccctgaactccaaagcctacaagcgc
agcaagagacagacgctgagagaggcacgcatgacagagaaactagagaagcagcagaag
atcgagcaggaaaggaagcgcagacagaaacaccaggagtatctcaacagcattctgcag
catgctaaagatttcaaggaatatcacaggtccatctctggaaaaatccaaaagctgtct
aaagccatcgccacatggcacaccaacaccgagagagagcagaagaaggagacggaaaga
atcgagaaagagaggatgaggagactgatggctgaggatgaagaaggttacaggaagcta
attgatcaaaagaaggacaagcgcctggcctaccttcttcaacagacagatgaatacgtg
gccaacctgactgagcttgtctatgagcacagggctgctcaggctgccaaggagaagaag
aggaagagaaagaagaagaagaaggaaactggggatgctgaaggaatgggagccatcggg
cctgatggagagctcatagatgagaacagtcagatgagtgagctgccagtcaaagtcatt
cagacagagacggggaaagtgctacaggggacagatgcccccaagtccagtcagttagag
gcctggctcgagatgaaccctggatatgaagttgctccacggtcagacagcgaagagagt
ggctcggaatttgaagaggaggatgatgaagaggtggtctccagagctgaatcggaagaa
aagaaagtcatcgatcccaacagtgatgaagtatctgaaacagcagccaagcacatcata
gagtctgctaaacaggatgtggatgatgagtacagtgttcaggcgggacagaccagctcc
cagtcttactatggagtggcccacacggtcatagagagggtggataaacagtccacccta
ctgatcaatgggaccctcaaacattaccaggtccagggtctggaatggatggtgtctttg
tacaacaacaacctgaatggtattctggccgatgagatgggactggggaagaccattcag
actattgcacttatcacttatttgatggaacacaagaggctcaacgggccgtacctcatc
atcgtaccgctctcgactttgtccaactgggttaatgagctggacaagtgggcaccaagt
attgtgaaaattgcctacaagggcacaccatcaatgcggaggtctttggtgccgcagctt
cgcagtgggaagtttaatgtccttataaccacctacgagtacatcatcaaagacaagcac
attctcgccaagattcgctggaagtatatgattgtggatgagggccaccgcatgaagaac
catcactgtaagctcacacaggtgttgaacacccactacgtcgctcctaggaggctgtta
ctcactggaacccctctgcagaacaaattgcccgagctctgggccctgctcaacttcctg
ttgcccaccatcttcaaaagctgcagcacctttgagcagtggttcaatgctccatttgca
atgacaggagagagggtggatctaaatgaagaggagaccatccttatcattcgtcgtttg
cataaggtgttacgtcccttccttttgcgcagactgaagaaagaggtggagtctcagtta
cctgagaaggtggagtatgtcatcaaatgtgacatgtcagccatccagaaggttctgtac
aggcacatgcagggcaaaggcatcctgctcactgacggctcggagaaagacaagaagggt
aaaggaggagccaagaccttaatgaacaccataatgcagctgaagaagatctgtaaccat
ccctacatgttccagcacattgaggaatcttttgctgagcacttgggatatccaaatggc
attatcagcggccctgacctgtaccgcgcttctggcaagtttgaattactggaccgcatc
ctgcccaagctgaaggccaccaatcacagagtgcttctgttctgtcagatgaccaccctc
atgaccatcatggaggattattttgccttccgtaacttcctctatttgcgtctggatgga
actacgaagtgtgaggatcgtgcaatgcttttaaagaaattcaacgaagaaggctcacag
tttttcatcttcctgctgagcaccagggcaggaggtctgggcctcaacttgcaagctgca
gacactgttgtgatctttgacagcgactggaacccccaccaggacttgcaggcccaggat
cgagcccatcgtatcggccagcagaacgaagtacgcgtattgcgtctgtgcactgttaac
agtgtggaggagaagattttagcggcggccaagtataaactgaatgttgatcagaaagtc
attcaggcaggcatgtttgatcagaagtcctccagccatgagcgcagagccttcctacag
gctattctggagcacgaggaacagaatgaggaggaagatgaaattccagatgatgaaact
ctcaatcaaatgattgctcgaaatgaggacgaatttgagctattcatgcgcatggattta
gaccgtcgtcgagaggatgcgcgcaaccctaaacgtaaacctcggctaatggaggaagat
gagttgccatcatggatcctgaaggatgatgctgaggtggagcggcttacctgtgaagag
gatgatgaaaagattttcggtcgtggatcacgtcaccgcagagatgtcgactacagtgac
acattgacggaaaagcagtggctaagggctgtagaggatggcaacctggaggaaatcgaa
gaggaaatacgcctgaagaggcgcaagcgtagcagacacgtagacaaagacctgaggcgt
gaggacggagacaaggccaagaaaagaagaggacgtcctccagcagagaagttttcccca
aacccacccaaactgatgaaacagatgaatgccatcattgatacagtcatcaattacaga
gatgcatcaggccgtcagctcagcgaggtctttgtgcagctgccctccaggaaagagctc
cctgaatactatgaactgataaggaagccagtggacttcaagaagatcaaggagcgtgtg
cgcagccacaagtacaggggtgtgagcgatctggagaaagacgtcatgcttctttgtcac
aatgctcagacttataatctagagggctctcagatctatgaggactcgattgttctccag
tcagtattcaagagtgcaagacaaaagcttgctagggaggaaagcgatgatgacagcaat
gatgatgatgatgatgatgacgaggaatcagaggaagaatctaaatcagtgaaggtgaaa
attaggcagagtaatcgggacgagagatgtcaggacaaaggcaagaagagaccaagtcgt
ggaaaggccaagcccgtggtcagtgatgatgacagcgaggaagaacaggaggagaacttc
aagagggaaatgagcagtcagaggggagccacagcgacgatgagtgaagaggagatgagc
tga
DBGET
integrated database retrieval system
