Sinocyclocheilus grahami (golden-line barbel): 107558292
Help
Entry
107558292 CDS
T04918
Name
(RefSeq) sodium channel protein type 4 subunit alpha-like isoform X1
KO
K04838
voltage-gated sodium channel type V alpha
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
107558292
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sgh04040
]
107558292
Ion channels [BR:
sgh04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
107558292
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
107558292
NCBI-ProteinID:
XP_016097422
LinkDB
All DBs
Position
Unknown
AA seq
1562 aa
AA seq
DB search
MTQDYWENLYHQTLRSAGKTYMIFFVLVIFLGSFYLVNLILAVVAMAYEEQNQATIAEAW
AKEREFQLAMEQLRKEQRALSKQRRKEAELALAADLSPSPFLRKDSLKCRSRMRSHRTLS
EEMEENSLPKFDPFDDKPAHPLLATLSSHPLSTRRGSQVSIFTFRPRNNSEADFADDEHS
IHDDGRSRAGSMAIPWNKRRTGSIRSHSSQVFMPTLTLNGRLNLPLDQNGITSISPHTPT
HAFSMEKEPVCQNEQTTAAAKLTVDVQEEVPPPRRKRGLSSVSFFSEAMDELEEAHQKCP
PCWYEFAKKYLVWTCSPAWLRVKEGLKVMVMDPFLDLAITICIVLNTLFMALEHYPMTDE
FNSMLTVGNLVFTGIFTAEMVMKIFALDPYYYFQQGWNIFDGIIVSLSLMELGLSNVEGL
SVLRSFRLLRVLKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKN
YQDCVCKISYDCTLPRWHMKDFFHSFLIVFRVLCGEWIETMWDCMEVAGQPLCILVFMLV
MVIGNLVMLNLFLALLLSSFSSDNLSAPDEDGEMNNLQIAISRIHFGFTWLLDGIKDLFN
GNLAGCRQKAKEKQVSLKENHTECNGGVGSLEQHGGKYITLEGEDSYITNPNLTICVPIA
PGESDVEFLEEEDDEETESSEDEEQKLEVSLSEGSTADLRKPGEDEEEYSEMADDGMDPE
ECFPEFCMQRCECCNINTARGLGQAWWRLRKTCYQIVEHSWFETFIIFMILLSSGALAFE
DIYIEQRKVVKVVLEYADKVFSYIFVLEMFLKWIAYGFKKYFTNYWCWLDFLIVDVSLIS
LVANSLGYSDFGAIKSLRTLRALRPLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFW
LIFSIMGVNLFAGKFGKCVNRTGYIHSVTLVNNKSDCQAMNDTQFYWTKVKVNFDNVGLG
YLSLLQVATFKGWMEIIYAAVDSRGVEEQPVKEINLYMYLYFVIFIIFGSFFTLNLFIGV
IIDNFNQQKRMIGCQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPVNILQGFFFDLVSKQ
AFDITIMMLIILNMITMMVETDEQSARMETVLNNINLAFIVIFTTECLIKIFALRCYFFT
ISWNIFDFVVVILSIVGIVLADIIEKYFVSPTLFRVIRLARIGRVLRLIRAAKGIRTLLF
ALMMSLPALFNIGLLLFLVMFIYAIFGMANFAYVKKQGGIDDMFNFETFGNSMICLFQIT
TSAGWDNLLDPILNNSPEECSSSYINTGTNTKGNCGNPSVGITFFVSYIIISFLIVVNMY
IAIILENFSVATEESTEPLSEDDFEMFYEVWEKFDVEATHFIEYSKLSSFANNLSEPLRI
AKPNRIKLINMDLPMVSGDRIHCLDILFAFTKRVLGETGEMDALKQQMEEKFMMTNTSKI
SHEPITTTLRRKQEEISASLIQRAYRRHLVRRQMKQASYLYRHIKQNAPWSEEDCALERE
GLIASMIKEHYGPEKGPPYLACSPPSYEAVTRDPSDHFKMLIPDSQSSEPPKSEETYDET
FL
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgacacaagactactgggaaaacctctaccatcagactttacggtcagcagggaagacc
tacatgattttctttgtgctggtgatatttctgggttcgttctacctagtgaacttgatc
ctggctgtcgtggccatggcgtatgaggagcaaaaccaggcgaccattgcagaggcctgg
gcaaaagaaagagagtttcagctggcgatggaacagctacgcaaggaacagagggcatta
tcaaaacagcgcagaaaggaggctgagctggctctggcagcggatttatctccatcacct
ttcttacggaaagactcgctgaaatgccgaagtagaatgagatcccacagaacgctttca
gaggagatggaggagaactctttgccaaaatttgacccatttgatgacaaaccagctcac
cctctcctagccactctctcctcccatcctctgagcacccgtcgcggaagccaagtcagc
atctttaccttccggccacgcaataattcagaggccgactttgcagatgacgaacacagc
atccatgatgatggacgaagccgagcgggttccatggctataccgtggaacaagcgtcgt
acgggtagcatcaggagtcactcgtcacaggtgttcatgcccaccctcacccttaacggc
agactaaaccttcctctggaccagaacggcatcaccagcatcagcccacacaccccgacc
cacgcgttcagcatggaaaaggagccagtgtgtcagaatgaacagaccactgcagctgcc
aagctgactgtcgacgtgcaggaggaggtcccgccccctcgcaggaagagaggactgagc
tctgtcagcttcttcagtgaagccatggatgaacttgaagaggcccatcagaagtgtcct
ccatgctggtatgaatttgcgaagaagtacctggtttggacatgctctccagcctggctg
agagtgaaggaagggcttaaagtcatggtgatggaccccttcctggaccttgcaattact
atttgcattgtactcaacacattgttcatggcgctggagcactaccccatgactgatgaa
ttcaacagcatgctgactgttggaaacctggtgttcactggaatcttcacggcagagatg
gtgatgaagatctttgctttggatccatactattactttcagcaaggctggaacattttt
gatggaattattgtttctttgagtctgatggagttgggcctttccaacgtggagggtctg
tctgtcctccgctcgtttagactgctgagagttttgaaactagcaaagtcatggcccacc
ctcaacacgctgataaagatcatcggtaactctgtgggtgccttggggaacctgacgcta
gtcttggccatcatcgtcttcatcttcgctgtagtgggcatgcagctgtttggaaagaac
tatcaggactgcgtgtgtaagatcagctacgactgcacccttcctcgctggcacatgaag
gacttcttccactcgttcctcatcgtgttccgggtcttgtgcggagagtggatcgagacc
atgtgggattgtatggaggtggctggacagccgctttgcattctggtcttcatgctggtc
atggtcataggaaacctggtgatgttgaatctgtttctagccctattgttgagctccttc
agctctgataatttgtcagcgcccgacgaagatggagaaatgaacaaccttcagatagcc
atcagtcgaatccactttggtttcacttggctgctggacggcatcaaagatctcttcaac
gggaacctggcaggctgcagacaaaaggccaaagagaagcaggtgtcactgaaagagaat
cacactgagtgcaacggcggtgtgggaagtttagagcagcatggagggaagtacattact
ctagaaggagaggacagttacattaccaatcccaaccttaccatctgtgtgcccattgcg
ccaggagagtcggacgtggaattccttgaggaggaggatgatgaggagacagagtcatca
gaggatgaagagcagaaactggaagtcagcctctctgaaggaagcactgcggacttgagg
aagcctggggaagatgaggaggaatattctgagatggcagatgatggcatggatccagaa
gagtgtttccctgagttctgtatgcagcgctgtgagtgttgtaacatcaacacggcgaga
ggtctgggtcaagcgtggtggaggttgaggaagacctgctatcagattgtggagcacagc
tggtttgagaccttcatcatcttcatgatcctcctcagcagtggcgctctggcatttgaa
gacatttacatcgaacagcggaaggtggtgaaggtggtgttggaatatgctgataaggtg
ttcagctacatcttcgtgctggagatgtttctgaagtggatcgcgtatggctttaagaaa
tacttcactaactactggtgctggctggacttcctgattgtggatgtttctttgattagc
ttggtcgctaactctctgggctactcggactttggggccattaaatctttgaggactcta
agagctctgaggcccttgagggccctgtctagatttgaaggaatgcgggtggtggtgaat
gcactgatcggggccatcccgtccatcatgaacgtactgctggtgtgcctgatcttctgg
ctcatatttagcatcatgggtgtcaatctgttcgctgggaaattcgggaaatgtgtcaac
aggacaggatacattcacagtgtaaccctggtcaacaacaagagtgactgccaggccatg
aatgacacccagttctactggaccaaagtgaaagtcaacttcgataatgtgggccttgga
tacctctcacttctgcaggtggcaacattcaaaggctggatggaaatcatatatgccgcc
gttgattcccgtggagttgaggagcagcccgtcaaagagataaacctctacatgtacctc
tactttgtaattttcatcatcttcggatccttctttaccttaaatctgttcatcggtgtc
atcatcgataacttcaatcagcagaaaagaatgataggttgccaggatatattcatgacc
gaagaacagaaaaagtactacaacgctatgaagaaacttggttcgaaaaagccacagaag
ccaattccaagaccagtgaacattttacaaggattctttttcgacttggtgtccaagcaa
gcctttgacattaccatcatgatgctcattattctcaacatgataaccatgatggtcgag
accgatgaacaatctgctcgcatggagaccgtcctcaataacatcaacctggccttcatt
gtcatctttaccactgaatgcctcatcaagatatttgccctccgctgttatttcttcacc
attagttggaacatatttgactttgtagtcgtgattctgtccatcgttggaattgtcctt
gctgacataatagaaaaatactttgtgtccccaactctgtttcgagtgatccggctggca
agaataggacgagttctcagactaatacgagcagctaaaggaataaggacgttacttttt
gccttaatgatgtcgctgccagctttgttcaacattggcctcctgctcttcctggtcatg
ttcatctatgccatttttggcatggcaaacttcgcctacgtaaagaagcagggcgggatt
gacgacatgttcaactttgaaaccttcgggaacagtatgatctgccttttccagatcacc
acatcggccggttgggataacctactggatcccattctcaacaactctccggaagaatgc
agctcgagttacatcaacaccggaaccaacactaagggtaactgtggcaacccctcggta
gggatcactttcttcgtcagttacatcatcatttccttcttgatcgtggtcaacatgtac
atagccatcattctggaaaacttcagcgtggccaccgaggagagcactgaacctctgagc
gaggatgactttgagatgttctatgaggtatgggagaagtttgacgttgaggccacacac
ttcatagagtactccaaactctcgagttttgccaacaacctttccgaacctctgaggatc
gccaaacccaacagaatcaaactcatcaacatggatctacccatggtcagcggcgacagg
atccactgcttggacatcctgttcgccttcactaagcgggtcctcggggagactggagaa
atggacgctttgaagcagcaaatggaggagaagttcatgatgacgaacacttccaagatc
tcccacgagcccatcaccaccacactgcggcgcaagcaggaggagatttcggcatccctg
atccagcgtgcctacaggcggcacctggttagacggcaaatgaagcaggcttcttacctg
tacaggcacataaaacaaaacgcaccctggtcggaagaggactgcgctctggagcgggaa
ggactcatagcgtctatgattaaagagcactacggtcccgagaaggggccaccgtactta
gcatgctctccgccgtcctatgaggctgtaacaagggatcctagtgaccatttcaagatg
ttaatacctgactctcaatctagtgagcctcctaaatcagaagagacgtatgacgagacc
tttctttag
DBGET
integrated database retrieval system
