Sinocyclocheilus grahami (golden-line barbel): 107558359
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Entry
107558359 CDS
T04918
Name
(RefSeq) tenascin-R-like
KO
K06252
tenascin
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04510
Focal adhesion
sgh04512
ECM-receptor interaction
sgh04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107558359
04518 Integrin signaling
107558359
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107558359
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sgh00536
]
107558359
Glycosaminoglycan binding proteins [BR:
sgh00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107558359
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Teneurin
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_3rd
Pur_ac_phosph_N
EGF_Tenascin
EGF_2
FN3_Tor_3rd
Fn3_Dep-1_4th
Interfer-bind
DUF4998
GH101_dom-5
DUF7949
DUF7359
Motif
Other DBs
NCBI-GeneID:
107558359
NCBI-ProteinID:
XP_016097508
LinkDB
All DBs
Position
Unknown
AA seq
1265 aa
AA seq
DB search
MWGCTMAIQGSMVSLALLFFAIQAVPNPTSKLVRTTRVRRQVPEGRVPSSNQTQAMIFNH
VYNINVPLESLCSVDLDTVPGPGTNKGTAGSDKMPTEYTEETVDSDSQVTFTHRINIPKQ
AYACPAAAAMEQLASRIEMLEREVSLLRAQCSSSCCGESSVIGHFDFVPQCGHGTFSMEV
CGCVCEEGWIGKNCSEARCPDDCSGQGICIEGECVCDRNFGGDNCSEPRCPGDCSDRGLC
IDGECVCEEAYAGEDCSLGRCLNDCSDQGTCVNGTCQCRPGFLGEDCSLIFCANNCSQKG
VCKDGFCACQEGYTGDDCASVSPPMNLQVRGVSENTIDLEWEGPVILTDYLITYAPTTPG
GVQLEIRVPGNVTNTTLKGLEPGLEYNINLYAVIDNIISAPMNTLVSTYLSNPDGLLFKS
IMETSVEVQWQPLDYLFDGWEISFIPKDNDGGMTAQLPSTITSFHQTGLRPGDEYTVNLV
ALKDQGRSQPVTATVITLIDGPTQLTVRDVSDTVAFVEWNPPKAKVDQIVLRYGLVGVDG
PKTTFRLQSTLSQYSLQVLRPGSTYEVSVSGVRNGTESGAISTEFTTEIDAPKNLRVLSK
TSTSLELEWDNSEADVEGYRVVYSTLAGDQYDKVIVPLNDGATTKTILTDLLPGTEYGIG
ISAVLGANQSTPATMNARTGLDVPLDLAVTASTDNTITLLWGTVQGPIDHYRVTYTSSTG
ATTELSVPKDVTTTTLTGLEPGTEYTITVAAQRGRQKSTAATIDAFTGFRPITQLFFSDV
TSDSLTVAWSAPAPPADAFILNYNAQDSSDDSEIALDGSKTRITLTGLLPSRRYTVTLVT
MHGNVTSKPVIGSVTTGVKDMTVQYVTEESVTISWIQPYAPFDYYKMSYQSPKGRMDNVV
TDNDITNYTLTSLHPATEYEIKLNAVRGSQESKVITTTVFTAMDMPMDLTALNVTPQGAL
LRWNPPVSSVDNYVLTLTRNQVMADTFLVEGNKQEYQLSQLIPSTTYSVALYATKGPLTS
GTVIANFVTPMDAPQNLTASEINHRSALISWQPPIADIDNYMLTYKAADGSRKELILDAE
DTWIRLEGLAETTEYTVRLQAARGIETSAIVSTSFTTGNRLFPTPQNCAQHLLNGETLSG
IYTIYINRDLSQGVQVYCDMTTDGGGWIMFQRRQNGLTDFSRKWSDYKIGFGNLEDEFWL
GLDNIQKIAAQGRYELRIDMKDGQESVYANYDRFSIGDSKSLYKLRIGEYNGTAGDSLSY
HQSRP
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atgtgggggtgcaccatggcaatacaaggttcaatggtgagcctggctttactgttcttt
gcgattcaagctgttcctaaccccaccagcaaactagtgaggaccacaagggtgaggcga
caggttcccgaaggtagggttccctctagcaaccagacccaggccatgatcttcaatcat
gtatacaacatcaatgtacctctagagtcactctgttcagtggaccttgacacggtacca
gggccagggacaaacaaaggtacagctgggagtgacaagatgccgacagagtacacagaa
gagacagtggactcggacagccaggtgaccttcacccatcgcatcaatatcccaaagcag
gcctatgcttgtcctgcggctgccgccatggaacagctggctagccgtatagagatgctg
gagagggaggtgtccttgcttcgagcacagtgtagctccagctgctgtggagagagctct
gttattggtcacttcgacttcgtccctcagtgtggccatggcacattcagcatggaggtt
tgtgggtgtgtttgtgaagaaggatggattggcaagaactgttctgaagcccgctgccca
gatgactgctctggccagggcatttgcatcgaaggcgagtgtgtatgtgaccgtaacttt
ggcggtgataactgctcggagcctcgatgtccaggtgattgctcagacagggggttatgc
attgatggcgagtgtgtttgtgaggaagcctatgctggggaggactgctcgctgggcaga
tgtcttaacgactgctcagatcaaggaacctgtgtgaacggaacctgccagtgccgaccc
ggcttcctgggggaagactgctctctcatcttctgtgctaataactgcagccagaaaggg
gtgtgtaaggatggtttctgcgcctgtcaagagggatatacaggagatgactgtgcttca
gtgtcacctcctatgaatctgcaagttcggggtgtgtcagagaacaccattgatctggag
tgggaggggcctgtgatcctgacagactatctcatcacttacgcccccacaacccctggt
ggagtacaactagagatcagagtcccaggaaatgttaccaacaccaccctcaaaggattg
gagccgggtctggagtacaacatcaatttgtacgccgtgatcgacaacatcatcagtgcc
ccaatgaacaccttagtctccacctatctctcgaatccagatggtttactcttcaaatcc
atcatggagacgtccgtggaggttcagtggcaacccttagactacttgtttgatggttgg
gaaataagcttcattcccaaggacaatgatggagggatgacagcacaactacccagtacc
atcacgtcgttccaccaaacagggctgcggcctggggacgaatacactgtcaaccttgtg
gccttgaaagaccaaggaaggagccagcctgttactgcaaccgttatcacattgatcgat
gggccaacacagcttactgtacgagatgtctcagacacggttgcctttgtggagtggaac
ccacccaaggctaaagtggaccagattgtattgcggtatgggctggtaggggtggatgga
ccaaagaccacctttcgcctccagtctactctgagccagtactccctccaagtcctgagg
cctggatccacatatgaagtatcagtcagtggagtccggaatggcactgagagtggagcc
atttccacagagtttaccacagaaatcgatgcaccaaagaacctgagagtgctgtcgaaa
acttccactagcctggagctggaatgggacaatagtgaggcagatgtagaaggctacagg
gtggtttacagcacactggctggtgatcagtatgacaaagtcattgtcccactcaatgat
ggcgccaccaccaaaactattctcactgatttactgcctggcacagagtatggcatagga
atttcagcagttctaggtgccaaccaaagcaccccagctacgatgaatgccagaactggt
ctggatgtccccttggatttggctgtcacagcctccacagataacaccatcaccctgttg
tggggcacagtgcaggggcctattgatcactatagggtgacctacacttcctccactgga
gccacaactgagctgtcggtgcccaaggatgtcaccaccaccacactgacaggtctagag
ccaggcactgagtacaccattacagttgcagcacagagaggcaggcagaagagcactgca
gccactattgatgcctttacagggttccgccctatcacacagctcttcttctctgatgtc
acttctgattcattgactgtggcatggagtgcaccggcaccgcctgctgatgcattcatc
ttgaactacaatgctcaggactccagtgatgattctgagattgctctagacgggtccaaa
accagaatcaccctcactggtctcctgccctccaggcggtacactgttaccttggttacc
atgcatggcaatgtgacctcaaagccagttattggctcagtcacaacaggtgtcaaggat
atgactgtgcagtacgtcacagaggaatctgtaaccatttcatggattcaaccatacgca
ccctttgattactacaaaatgtcttaccaatcaccaaaaggtaggatggacaatgtggtg
actgacaatgacatcaccaactacaccctaaccagcctccatccagcaacggagtacgag
atcaagctgaacgcagtgagaggaagccaagagagcaaggtcatcaccactactgtcttt
acagctatggacatgcctatggacctcacggcattgaatgttacacctcagggggctctg
ctacgttggaacccccctgtttccagtgttgataactacgtgctcaccctcacccgtaac
caagttatggcagacaccttcttagtggagggtaacaagcaggagtaccagctgagtcag
ctcatccccagcaccacctactcagtggctctttatgccactaaaggtcctctcaccagt
ggcactgtcatcgccaactttgtcacacccatggatgcgccccagaacctgacagctagt
gagattaaccatcgaagcgccctcatatcctggcagccgcccatcgcagacatcgataac
tacatgctgacctacaaagcagcggatggcagtcgaaaggagctgatcttagatgctgaa
gacacgtggatccgtctcgaggggctggcggagaccaccgaatatactgtgagactgcaa
gctgctagaggaatagagaccagcgccattgtttctacatcgttcacaacaggaaatcga
ttatttcccacgccacagaactgtgcgcaacacctcctgaatggagaaacgctgagcgga
atttacaccatctacatcaacagagacctcagccaaggtgtgcaggtttactgcgacatg
accaccgatggaggcggctggataatgttccagcgacgtcagaacggtttgactgatttc
tccaggaagtggagtgactacaagatcggctttggcaacctggaggatgaattctggctc
ggattggacaacattcagaagattgcagctcaaggtcgttatgagctccgcattgacatg
aaagatggccaggagtctgtatatgccaactatgacaggttttccattggagattccaag
agcctctacaaactgaggataggagagtataatggcactgcaggtgactctctaagctac
catcaaagcagacct
DBGET
integrated database retrieval system
