Sinocyclocheilus grahami (golden-line barbel): 107558378
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Entry
107558378 CDS
T04918
Name
(RefSeq) X-ray repair cross-complementing protein 5-like
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
107558378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgh03400
]
107558378
DNA repair and recombination proteins [BR:
sgh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
107558378
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_C
Ku_PK_bind
VWA_2
VWA
Motif
Other DBs
NCBI-GeneID:
107558378
NCBI-ProteinID:
XP_016097528
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MARAAKSALVLCMDVGFSMSNSEPGQEPSFEQAKKVIQKFVQRQVFAENKDEVGLVLFGT
DGTKNGLAKDGQYENITVHRHLMMPDFELLEEIESELQPGGQQADWLDALVVCMDLLQKE
TMGKKFERLNIVLLTDLNVQTSADQLDVIIDSLKKAGITLQFFLPFPVDGEDRADGGGDG
PGPSAAPARPGKGLSRQQTQGLEMVKNIMTSLEEEDSLEEVYTFSDALQKLSIFKRIDRR
PMAWPCQLTIGSSLTIRIVGYKAVTEEKVKKSWAIVEAQSHQRDDVKRETVYCLDDDNET
EVQKDDTIQGFRYGSDIVPFSKVDEDQMKYKSDGKCFSVLGFTKQELIRRHQFMGSQVVK
VFAPRDDEHAAVALSALIRALDSLKMAAIVRYAYDRRSNPQVGAAFPCIKEKYECLLYVQ
LPFMEDLRQFTFPVLENNKKFTPSASQLSAVDALIDSMMLVEKDEDGESVDVFKVNHFPN
PQFQRLFQCLHHRGVNPDDPLPPVEPWLKRDLERPQAVSARCQTALQDVKTKFPLKVVVK
KKEQKTSADVFGSSADEPDAKKVKVDEETEFNLAEIAKGNITSRIDAFAYALLTAPAHNV
LHQSGNAELFNSYMQSLKRSVPDRNLQEFWDLLIQDALTLISKDEVDGSTFSKQDANQFL
AFEQKEEVQAAPVQEDTGDVDDLLDMM
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgagcagcgaagtcagcgttggtgctttgcatggatgtgggtttctccatgagc
aactctgagcctggccaggaaccgtccttcgaacaggccaaaaaagtcatccagaagttt
gtccagcggcaggtgtttgctgagaataaagatgaggtgggtctggtgctgtttggtaca
gatggcacgaagaacggcttggccaaagacggccagtatgagaacatcacggttcaccgt
cacctcatgatgcctgattttgagctgctcgaggagattgagagcgaactgcaacctggt
ggtcagcaagcggactggcttgatgctctggtcgtttgcatggaccttttgcagaaggaa
accatggggaagaagtttgagcgtctgaatattgtcctgctgacggatctgaacgtccag
acctcggcagaccagctggacgttatcattgacagcttgaagaaagctggtatcaccctg
cagttctttttgccgttccctgtggatggtgaggacagagcggatggtggaggggatgga
ccgggaccctcagcggctcctgcccgtcctggaaaaggcttgagcagacagcagacacaa
ggtctggagatggtcaaaaacatcatgaccagcctggaggaggaggacagcctggaggag
gtctacacatttagtgatgctctgcagaagctgtccatcttcaagcgcatcgacaggagg
ccgatggcttggccctgtcagctgaccatcggcagctccctgaccatccgcatcgtcgga
tacaaagctgtgacggaggagaaggtgaagaagtcctgggccatagtagaagctcagagt
caccagagagacgacgtcaagagagaaacggtttactgcctggatgatgataatgaaact
gaagtacagaaggacgacactatccaaggtttccgttatggaagcgacattgtgccgttt
tctaaggtggacgaggaccagatgaaatataagtctgatgggaagtgtttttctgtgctt
ggcttcactaaacaggagctgattcgtcgtcatcagtttatgggaagccaagttgtcaaa
gtttttgcacccagagacgatgagcatgcagcagtggcgctgtccgctctgattcgtgcc
ctcgacagtctaaagatggcagcgattgtacgttatgcttacgatcgtcgcagcaaccct
caagtgggcgccgcttttccctgcataaaggagaaatatgaatgtctgctgtacgtgcag
ctgccgtttatggaggatctccgacagttcacattcccagtgttggagaacaacaagaag
ttcacgccttcagcgtctcagctgtcagccgtggacgcgctgatcgactccatgatgctg
gtggaaaaggatgaggatggagagagcgtggacgtcttcaaagtcaaccactttccaaac
cctcagttccagagacttttccagtgcttgcatcaccgcggtgtgaatcctgatgatccc
ctgccgcctgtagagccgtggctgaagagggatctagagcggccccaggccgtgtctgcc
cgctgccagaccgctctgcaggacgtcaagaccaagttcccactgaaagtggtggtgaaa
aagaaagagcagaagacgagcgcagacgtgttcggcagcagtgctgatgaaccagatgcg
aagaaagtcaaagtggatgaagagacggagtttaacctggccgagattgcgaaaggaaac
atcacatcgagaattgatgcatttgcttacgcacttcttactgcacctgcccacaatgta
ctccatcagagcggaaacgcagagctgttcaacagctacatgcagtccctgaagaggagc
gttcctgacaggaatcttcaggagttctgggatctgctcatccaagatgctctgacgctc
attagcaaagatgaagtggacggaagcaccttttccaaacaagatgcaaaccagttcttg
gcgtttgagcagaaagaggaagtgcaggcggctccagtgcaggaggacactggagatgtg
gatgatctgctggacatgatgtaa
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integrated database retrieval system
