Sinocyclocheilus grahami (golden-line barbel): 107558485
Help
Entry
107558485 CDS
T04918
Symbol
odc1
Name
(RefSeq) ornithine decarboxylase isoform X1
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh00330
Arginine and proline metabolism
sgh00480
Glutathione metabolism
sgh01100
Metabolic pathways
sgh04148
Efferocytosis
Module
sgh_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
107558485 (odc1)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
107558485 (odc1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107558485 (odc1)
Enzymes [BR:
sgh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
107558485 (odc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
107558485
NCBI-ProteinID:
XP_016097630
UniProt:
A0A672R7R1
LinkDB
All DBs
Position
Unknown
AA seq
460 aa
AA seq
DB search
MTSLTGSDFDFAFLEEGFCARDIVEQKINESSLSDDKDAFYVADLGDVLKKHLRWLRVLP
RITPFYAVKCNDSRAVVTTLASLGAGFDCASKTEIQIVQSVGVEPSRIIYANPCKQVSQI
KYASAHGVQMMTFDSEVELMKVARSHENSKLVLRIATDDSKAVCRLSVKFGATLKSSRLL
LERAKELGLDVIGVSFHVGSGCTDPETYRQAISDARYVFDMGAELGYDMTLLDIGGGFPG
SDDTKLKFEEIAAVINPALDKYFPVDCGVRIIAEPGRYYVASAYTLAVNIIAKKVIMKEQ
SASDEEEDGANDRTLMYYVNDGVYGSFNCILYDHAHVLPTLHKKPKPDERMYPCSIWGPT
CDGLDRIVEQCSLPDMQMGDWLLFENMGAYTVAASSTFNGFQKPDIHYIMSRTAWQRMQQ
IHAQGVPLAAEEQCAGSVPSHCGRESTLDVPAEPCPTQVL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgacctctttgactggatcagactttgacttcgccttcctggaggaggggttctgtgca
cgtgatatcgtggagcagaagatcaacgagtcatcactatcagatgacaaagatgccttc
tatgtggccgacctgggtgacgtcctgaagaagcacctccgttggttgcgcgttttaccc
cgtatcacaccgttctatgcagtgaagtgcaatgacagcagggctgtcgtcacgacactg
gcgtctctgggagccggattcgactgtgcgagcaagactgagatccagatcgtgcagtct
gtgggtgtggagccgagcaggatcatctacgccaacccctgcaagcaggtgtctcagatc
aaatacgcctctgctcatggagtgcagatgatgacgtttgacagtgaagtggagctcatg
aaggtggcacgaagccatgagaattccaaactggttctccgtatcgccaccgacgactcg
aaggcggtgtgcaggttaagtgtgaagtttggtgccacgttaaagagcagtcggctgttg
ctggagagggcgaaggagctcgggctggacgtgattggagtcagttttcatgtgggcagt
ggttgcactgatcctgagacgtaccgccaggcgatctcagatgcgcgctatgtttttgac
atgggggcagaactgggatatgacatgaccctgcttgatattggaggaggctttccaggc
tccgatgacaccaaactgaaatttgaagagatcgctgctgtgattaaccctgcactggat
aaatatttccctgttgactgcggcgtgaggatcattgctgaacctggccgctattatgta
gcgtctgcgtacacgctggctgtcaacatcattgccaaaaaggtcatcatgaaggagcaa
tcagcctcagatgaagaagaggatggggccaatgacagaaccctgatgtactacgtgaac
gatggtgtttatggttccttcaactgcattctgtatgaccatgcgcatgtcttgccaact
ctgcacaagaaacccaagcctgatgagcgcatgtacccatgcagcatttggggcccgacc
tgtgatgggctagaccgcattgtggagcagtgcagcctgcctgacatgcagatgggtgac
tggctgctgtttgagaacatgggtgcctacactgtagccgcgtcttccaccttcaatggc
ttccagaaacccgatattcattacatcatgtcccgcacagcctggcaacgtatgcagcag
atccatgctcagggggttccgcttgctgctgaggagcagtgcgctggaagtgtgccatcc
cactgcggacgcgagagcacattggatgtgccagccgagccatgccctactcaagtgctg
tga
DBGET
integrated database retrieval system
