Sinocyclocheilus grahami (golden-line barbel): 107558512
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Entry
107558512 CDS
T04918
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I-like
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04010
MAPK signaling pathway
sgh04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107558512
04020 Calcium signaling pathway
107558512
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sgh04040
]
107558512
Ion channels [BR:
sgh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107558512
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
CIF2
TMEM208_SND2
Motif
Other DBs
NCBI-GeneID:
107558512
NCBI-ProteinID:
XP_016097652
LinkDB
All DBs
Position
Unknown
AA seq
1612 aa
AA seq
DB search
MMVILLNCVTLGMYQPCENIDCSSERCQILQAFDAFIYIFFALEMVVKIVALGIFGRRCY
LGDTWNRLDFFIVMAGSTGVALPAPYYSPDEKDERPFICSLPQDNGIMSCSDVPARRVAG
HQCCLEVDDLLHHQALGLVTEPFLNASAVVPGLCVNWNRYYTRCHTGHRNPHKGAINFDN
IGYAWIVIFQVITLEGWVEIMYYVMDAHSFYNFIYFILLIIRSECFWVEIMYYVMDAHSF
YNFIYFILLIIVGSFFMINLCLVVIATQFSETKQREHQLMQEQRAACLSSSTLAEPGNCY
EEIFQLVCHVLRKVRRRTAAFFRTLCCKPPEQMHEKTDINGGEKSLQQHDGAAPAASAAN
QETEEEVANETERCKRAEGVCRGRSRELWMEMRVKLWSIVESKYFNRGIMVAILINTISM
GIEHHQQPEELTNVLEICNIVFTSMFALEMILKLTAFGCFKYLRNPYNIFDGIIVIISVC
EIVGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFS
ILGMHIFGCKFSLKTDTGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSPL
VALYFVALMAFGNYVLFNLLVAILVEGFQAEGDANRSYSDDDDDDDEGSSSNGSEQHKNS
LTSSDPKLSSLTPNGHLDLAPLAEEKTRTDFSEENHPSRTICLDRRSSSLGDANRSYSDD
DDDEGSSSNGSEQHKNSLTSSDPKLSSLTPNGHLDLAPLAEEKTRTDFSEENHRSRTICL
GRRSSSLCHSRSSHYHHWGRPPPQPSWSRRCSWNSAGRSARGLRAGGVIGGSLRVRGVHS
HPAEHESLLPHPPFLSRRHRRALSLELPELLQRPPLVWKKSVSAEHQDCNGKGPGPQGPL
LGEVYPQLNARKNKNDLEEDTEYSLCFRIQKMMEVYRPGWCERREDWSIYLFSPQNKFRL
LCQTIIAHKLFDYVVLAFIFLNCITVALERPRIHQGSLERVFLTISNYVFTQSQLIRSLS
RLSQVVSKGLYLGDRAYLRSSWNILDGFLVFVSLIDIVVSMTGGAKILGVLRPVINNSPW
MLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEVEEARRREEKRLKRMEKRRRSKTL
HMRRKEFERLISLSSLLSSIHLHRPAALPVINNSPWMLLYFISFLLIVSFFVLNMFVGVV
VENFHKCRQHQEVEEALRREEKRLKRMEKRRRKAQRLPYYSSYGRVRRMIHSFCTSHYLD
LFITLIICINVVTMSLEHYNQPRSLEMALTYCNYFFSSTFVVETMLKLVAFGFRRFFKDR
WNQLDLAIVLLSVMGITLEEIEINASLPINPTIIRIMRVLRIARVLKLLKMATGMRALLD
TVVQALPQVGNLGLLFVLLFFIYAALGVELFGELVCNVEYPCEGMSRHATFENFGMAFLT
LFQVSTGDNWNGIMKDTLRECPPGDSYSCNTSLQIISPMYFVSFVLTAQFVLINVVVAVL
MKHLDDSNKEAQEDAEMDAEIEMELAQGGLCCLGRPERSTGADAGERPARGCGNRQTVHT
HTSTSQSGLTPHRNTQDTQNQRKLYSPAQVCLALADILNTGHRGHHSLCHLL
NT seq
4839 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgatcctgctgaactgtgtgacgctggggatgtaccagccctgcgagaacatc
gactgctcctccgaacgctgccagatcctgcaggccttcgacgccttcatctacatcttc
tttgcgctggagatggtggtgaagatagtggcgctggggatcttcggccggcgctgttat
ctgggagacacctggaacagactggacttcttcatcgtgatggccggctcaacaggtgtg
gcactccctgctccatactattctcccgatgagaaggacgagaggcccttcatctgctct
ctgccgcaggataatggcatcatgtcgtgcagtgacgtgccggcgcggcgtgtggcggga
catcagtgctgtctggaagtagatgatctcctgcaccatcaggcactgggcctcgtgacc
gagccctttctcaacgccagcgccgtcgtccccgggctctgtgtcaactggaaccgatac
tacacacgctgccacaccggacacagaaacccacacaaaggagccatcaactttgacaac
atcggatacgcctggatcgttatatttcaggttattactctggagggctgggtggaaatc
atgtattacgtcatggatgctcactcattctacaacttcatctactttattctgctgatt
ataaggagcgagtgtttctgggtggaaatcatgtattacgtcatggatgctcactcattc
tacaacttcatctactttattctgctgattatagtcggctcgttcttcatgataaacctg
tgtttggttgtcatagcgactcagttttcagagaccaaacagcgtgagcatcagctgatg
caggagcagcgagctgcctgtctgtcctccagcacgctggccgaacccggcaactgctac
gaagagatcttccagcttgtctgccatgtcctccgcaaggtgcgccgacgcaccgctgcc
ttcttcaggacgctctgctgcaaaccaccggagcagatgcatgagaaaacggacatcaac
ggaggagagaagagcctccaacaacatgatggagctgcacctgccgcatcagcagccaat
caggagacagaggaagaggtggccaacgagacagagaggtgcaaaagggcagagggggtg
tgtcgggggcggagccgagagctgtggatggagatgagggtcaaactgtggagcatcgtg
gagagtaaatacttcaacagaggaatcatggtggccatcctcatcaacaccatcagcatg
ggcatagagcaccatcagcagccagaggagctcactaatgttctggagatctgtaacatc
gtcttcaccagtatgtttgctctggagatgatcctcaagctcacagcattcggctgcttt
aaatacctgcgcaatccgtacaacatctttgatgggatcatcgtgatcatcagcgtgtgt
gagatcgtgggtcagtctgacggcggtctctcggtgctccgcaccttccgcttgctgcgg
gtcctgaagctggttcggttcatgccggcgctgcgcagacagctggtggttctgatgaaa
acaatggacaatgtggccacattctgcatgctgctgatgctcttcatcttcatcttcagt
attctgggaatgcatatatttggctgtaagttcagtctgaagacggacaccggagacacg
gtcccagacaggaagaactttgactctctgctgtgggcgatcgtcactgtgtttcagatc
ctgactcaggaggactggaacgtggtcctgtataacggcatggcctccacgtctcctctg
gtggctctgtacttcgtggctctgatggcgtttgggaactacgtgctgttcaacctgctg
gtggctattctggtggagggatttcaggccgagggtgatgccaatcgctcgtactctgat
gatgatgatgatgatgatgaaggatcctcctctaatggaagtgaacagcacaaaaactcg
ctcacgtcctccgatcctaagctgtcgtctctcactcctaatgggcatctggatctggca
ccgctggcagaggagaagaccaggaccgacttctccgaggaaaaccacccgagcagaacc
atctgcctggacaggagatcctcgtctctgggtgatgccaatcgctcgtactctgatgat
gatgatgatgaaggatcttcctctaatggaagtgaacagcacaaaaactcgctcacgtcc
tccgatcccaagctgtcgtctctcactcccaatgggcatctggatctggcgccgctggcg
gaggagaagaccaggaccgacttctcagaggaaaaccaccggagcagaaccatctgcttg
ggcaggagatcctcgtctctgtgccacagccgcagttcccattaccaccactgggggcgt
cctccccctcagccgtcctggagccggcggtgtagctggaacagcgcgggtcgctccgcc
cgtggtctgagggccggaggggtcatcggggggagcttacgagtccgtggcgttcactcg
caccccgccgaacacgagtctctcctgccccacccgccattcctgtctcgccgacaccgc
cgcgctctctcactcgagctgcctgagctcctgcagcgccccccgctggtctggaagaag
agtgtgtctgcagaacaccaggactgtaatgggaagggcccgggccctcaggggccactg
ctgggagaggtttatccacagctcaacgcacgcaaaaacaagaatgacctcgaggaagac
accgaatatagcctgtgtttccgtatccagaagatgatggaggtctatcgtccgggttgg
tgtgagaggagagaggattggtccatttacttattctctcctcagaacaagtttcgtctg
ctgtgtcagacgatcatcgctcataagctctttgactatgtggttctggctttcatcttc
ctcaactgcatcacagtggctctggagagacccagaatccatcagggcagtctggagcga
gtcttcctcaccatctccaactacgttttcactcaaagccagctgatccggtctctgtct
cgtctgtctcaggtggtttctaagggtctgtatctgggggatcgcgcgtatctgcgcagc
agctggaacattctggatgggtttctcgtcttcgtgtctctgattgatattgtggtgtcg
atgacgggtggagcgaagatcctgggcgtcctgcggcccgtcatcaataacagcccctgg
atgctgctgtacttcatctccttcctgctgatcgtcagtttcttcgtcttgaacatgttt
gtgggtgtggtggtggagaacttccacaagtgccggcagcatcaggaggtggaggaggcg
cggcggagggaggagaagcggctgaagcgcatggagaagaggaggcgcagtaagaccctg
catatgaggaggaaggagtttgagcgtctcattagtctctcatctcttctcagctcaatc
catctccatcgtcccgctgctctccccgtcatcaataacagcccctggatgctgctgtac
ttcatctccttcctgctgatcgtcagtttcttcgtcttgaacatgtttgtgggtgtggtg
gtggagaacttccacaagtgccggcagcatcaggaggtggaggaggcgctgcggagggag
gagaagcggctgaagcgcatggagaagaggaggcgcaaggcccagcggctgccgtattac
tcctcatacggtcgcgttcggcggatgattcactcgttctgcaccagtcattatctggac
ctcttcatcaccctcatcatctgcatcaatgtggtcactatgagcctggagcactacaac
caaccacggtcgttggagatggcgctgacatactgcaactacttcttcagctccacgttt
gtggtggagaccatgctgaagctcgtcgcgttcggcttcagacgcttctttaaagacaga
tggaatcagctggatctggccatcgttctgctgtctgtgatgggaatcactctggaggag
attgaaataaacgcttcgctccccatcaatcccaccatcatccgaatcatgagggtcctg
cgcatcgcccgcgttctgaagttgttgaagatggccacaggaatgagagcgctgctcgat
actgtggtgcaggcgttaccgcaggtggggaatctgggtttgctcttcgttctgttgttc
ttcatctacgccgcgctcggagtcgagctgtttggagaactggtgtgtaatgttgaatac
ccgtgtgaaggcatgagccgtcacgccacgtttgaaaacttcggcatggcgttcctcact
ctcttccaggtgtctacaggagataactggaacggcatcatgaaggacacgctgcgcgag
tgtccgccgggcgacagctactcgtgtaacaccagcctgcagatcatctcgcccatgtac
ttcgtgagcttcgttctgacggctcagtttgtcctgattaacgtggtggtggctgtgctg
atgaagcacctggacgactccaataaagaggcgcaggaggacgcagagatggatgcggag
atcgagatggagctggcgcagggcggcctgtgctgtctggggcgtccggagcgctcgacc
ggggccgatgcgggcgagaggccggcgagaggctgcggaaacagacagacggttcacaca
cacaccagcaccagccagagtggattgacaccgcacagaaacacacaggacacacagaac
cagaggaaactctactcaccggcacaggtgtgtctcgcactcgctgacatactgaacacg
ggacacagaggacatcacagcctgtgccatttactgtaa
DBGET
integrated database retrieval system
