Sinocyclocheilus grahami (golden-line barbel): 107558653
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Entry
107558653 CDS
T04918
Symbol
cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sgh03016
]
107558653 (cdkal1)
Enzymes [BR:
sgh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
107558653 (cdkal1)
Transfer RNA biogenesis [BR:
sgh03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
107558653 (cdkal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
107558653
NCBI-ProteinID:
XP_016097800
LinkDB
All DBs
Position
Unknown
AA seq
566 aa
AA seq
DB search
MPSACDSLLDDIEDMVTSHDPTPHERQFARRSIVPRPRPRRQQLQPAGEELQTDSVIPGT
QKIWVRTWGCSHNSSDGEYMAGQLAASGYKITENPSDADLWLLNSCTVKNPAEDHFRNSI
KKAQEQNKKVVVAGCVPQAQPRTEYLKDLSVIGVQQIDRVVEVVDEAIKGHSVRLLGQKK
EKGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVERAR
QSFQEGVCEIWLTSEDTGAYGRDIGTDLPSLLWELVKEIPEGAMLRLGMTNPPYILEHLE
EMVRILQHPRVYAFLHVPVQSASDSVLMDMKREYCCADFRSVTDFLQQRVPGITIATDII
CGFPGETDEDFEQTMELVRQYRFPSLFINQFYPRPGTPAAKMEQVPAHMKKQRTKELSAL
FHSYKPYDHKIGERQRVLVTEDSFDSQYYVAHNKFYEQVLVPKKPELKGKMVEVDIYEAG
KHYMKGRPVEDAQVFTPSIAQPLQKGQVSGLPQELKATHQNGACASVASSALVGQSWRFD
GDGLKLLSLGLALAAVIVALVIEKLH
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgccgtctgcttgtgactctctgctggatgatattgaggatatggtgacctcgcatgac
cccactcctcacgagcggcagtttgcccggaggagcatcgtgccccgtccccgtccccgc
agacagcagctgcagcccgccggagaagagctgcagacagacagcgtgattcccggcaca
cagaagatctgggtgaggacctggggctgctctcacaacagctctgatggagaatacatg
gctggacagctggctgccagcggatataagatcacagagaacccgtctgacgctgatctg
tggctgctgaacagttgcacagtcaaaaaccctgcagaagatcacttcaggaactccatc
aagaaagcgcaggagcagaacaagaaggtggttgtggcgggatgtgtgccgcaggcccag
cccaggacagaatacctgaaagacctgagcgtcattggggtccagcagatcgatcgagtg
gtggaggttgtggacgaggctatcaaaggtcactccgtgcgtctgctgggtcagaagaag
gagaaaggcaagcgtctgggaggagcgcggctggatctgcccaagatcaggaagaacccg
ctgattgaaatcatttccatcaatacaggctgtctgaatgcttgcacgtactgcaaaacc
aaacacgccagaggagatctggccagttaccccatcgaggagctggtggagagggccaga
cagtccttccaggagggcgtctgtgagatctggctgaccagcgaggacacgggtgcgtac
ggcagggacatcggcacggacctgccctctcttctctgggagctggtgaaggagatcccg
gagggagccatgctgcgcctgggcatgaccaacccaccgtacatcctggaacatctggag
gagatggtccggatcctgcagcacccgcgggtctacgccttcctccacgtgccggtgcag
tctgcgtctgacagcgtgctgatggacatgaagagagagtactgctgcgcagacttcaga
agcgtcacagacttcctccagcagagggttcctggcatcactattgccacagacatcatc
tgcggtttcccaggtgagacggacgaggactttgagcagacgatggagctggtgaggcag
taccgctttcccagcctcttcatcaatcagttctacccgcgacctggcactccagcggcc
aagatggagcaggttccagcgcacatgaagaaacaaagaaccaaagagctctctgccctc
ttccactcgtacaagccttacgaccacaagatcggcgagaggcagcgtgtgctggtcacg
gaggactccttcgattcgcagtactacgtcgctcacaacaagttctacgagcaggttctg
gtgcccaagaagcccgagttgaaagggaagatggtggaggtggacatatacgaggctggg
aagcactacatgaagggccggccggtggaggacgcgcaggtcttcactccctccatcgct
cagccgcttcagaagggacaggtgtctggactccctcaggagctgaaggcgacccatcag
aacggcgcctgtgcctcggtggcttcctctgcgctcgtgggacagtcctggaggtttgac
ggtgatggactcaagctgctgtcattgggactcgctctggctgctgtaatcgtggctctt
gtgattgagaagctccactga
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