Sinocyclocheilus grahami (golden-line barbel): 107558908
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Entry
107558908 CDS
T04918
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
107558908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sgh04121
]
107558908
Enzymes [BR:
sgh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107558908
Ubiquitin system [BR:
sgh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
107558908
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
zf-B_box
RING_XB3-XBAT31
zf-RING_2
zf-RING_5
zf-C3HC4_2
ANCHR-like_BBOX
zf-RING_10
zf-RING_4
zf_RING_Vps8
DUF4667
zf-UBR
Motif
Other DBs
NCBI-GeneID:
107558908
NCBI-ProteinID:
XP_016098094
LinkDB
All DBs
Position
Unknown
AA seq
541 aa
AA seq
DB search
MSQSKPEERLALELSCAICLQLYRDPVALPCGHNYCLGCIQKAASAEDPKSPKRCPECRE
EYGSLETLPKNFKLSSIVDGFLVATTGGGLRGGPTVPCDQCLDNPLAAVKFCTRCEMSLC
PSHLKKHEERHRSLHVLVELPAERDGKRCPVHLKVTEYLCVQERLFLCSDCLMEGSHQHH
EVQTFEVAKEEMKRVLEELGKSVSDKLQITEALVKSASEGPTDKAEDKLVARANILLDNM
TLLISTYKSRMSTVMNDELHSRDKSWQANLCDLEGCLHQLQEAQKCTGEVLSQSSEFLFI
QNYLNVEARVRQAANVTIPALPSQESSHAKQLCSILRTDAFRAEMSLLLEYLHGMMNPLD
LTFNPATAHSSLLLSSDLKTVKQCAGVKSSTTGDQSERFSTATQVMCTQGFSTGVHMWAV
EVGPGCMWSLGLCYKNIPRKGDHSRLGHNTSSWRLQWKSKKLTACYDSANVAIGEGLVMP
PKKVEVTLDYEGGTIAFHSSGQGGRRQHLHTFSAMFKDTVYPAFAIHSTSEESWITLLSG
V
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaagcaaacctgaggagcgtctagctttggagttgagctgtgcgatctgtttg
cagctgtaccgtgatcccgtggcccttccgtgtggacacaattattgcttgggttgtata
caaaaggctgccagcgcagaagatcccaagtccccaaaacggtgcccggaatgcagggaa
gagtacggcagcctggagacgcttcccaagaacttcaagcttagcagtattgtggatggg
ttcctggtggccacgacaggtggcggactgagaggaggccctacagtaccatgtgaccag
tgtctggacaaccctctagctgcggtgaaattctgcacacgctgtgaaatgtcactgtgc
cccagccatctcaaaaaacacgaggaacggcaccgctcactacacgtcttagtggagctg
cccgcagaacgggatgggaagaggtgcccggtgcacttgaaggtcacggagtacctgtgt
gtgcaggagcgactgttcctctgctccgactgcttgatggagggctctcaccagcaccac
gaggtgcagacgttcgaggtggcgaaggaggaaatgaagagagttcttgaggaactgggg
aagtctgtgtctgacaagctacagattacagaagctctggtgaaaagtgccagtgaaggt
cctacggacaaggccgaagataaactggtggccagagcaaacatactgctggacaacatg
actttgcttataagtacatacaagagtcgtatgagcactgtgatgaacgacgagcttcat
tctcgggacaaaagttggcaggccaatctatgcgacttggagggttgtctacaccagctg
caggaagcccaaaaatgcaccggtgaggttctctctcaatcctcagagtttctcttcatc
cagaactacctcaacgtcgaagcaagggtccgccaggctgctaatgtcaccattcctgct
ctaccttcccaagagtcttcccatgccaagcagctgtgctcgatcctacgtacagatgcc
ttccgtgccgagatgagtcttctattggagtacctccatggcatgatgaaccctctagac
ctgaccttcaacccagccacggcccattctagccttctgctgtccagcgatctcaaaaca
gtcaagcagtgtgccggagttaagagcagcaccactggagatcagagcgaacgcttctct
acggccactcaggtcatgtgcacccagggtttctccacaggagttcacatgtgggcagtg
gaggttggtcctgggtgtatgtggtctctgggactgtgctataaaaacatcccacgtaaa
ggtgaccacagcaggctggggcataacaccagttcctggaggttgcagtggaaaagcaag
aagctgacggcatgctatgactcggctaatgtggccataggtgaagggctggtcatgccg
ccaaagaaggtcgaagtgaccctggattacgaaggaggaactattgcattccacagctca
ggtcaaggagggcgaaggcagcaccttcatacatttagtgccatgttcaaggacacagta
taccctgcgttcgcgatccactctacttcagaggagtcatggataacccttctgagtgga
gtttga
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integrated database retrieval system
