Sinocyclocheilus grahami (golden-line barbel): 107559013
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Entry
107559013 CDS
T04918
Name
(RefSeq) breast cancer type 2 susceptibility protein homolog
KO
K08775
breast cancer 2 susceptibility protein
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03440
Homologous recombination
sgh03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107559013
03460 Fanconi anemia pathway
107559013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sgh04121
]
107559013
03036 Chromosome and associated proteins [BR:
sgh03036
]
107559013
03400 DNA repair and recombination proteins [BR:
sgh03400
]
107559013
Ubiquitin system [BR:
sgh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
107559013
Chromosome and associated proteins [BR:
sgh03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
107559013
DNA repair and recombination proteins [BR:
sgh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
107559013
FA (Fanconi anemia) pathway
Downstream FA components
107559013
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA2
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
Tower
BRCA2_TR2
Motif
Other DBs
NCBI-GeneID:
107559013
NCBI-ProteinID:
XP_016098207
LinkDB
All DBs
Position
Unknown
AA seq
2685 aa
AA seq
DB search
MFDNFFHQIDKELGPLNPDWFEELTAKASRDEGRPNSSKGEEEEKTVKVPETSALASQLF
STPKIFKQPHFQSPASIPNEESPYEAVNGDSSAFPWTESSPCLFGSAKDSQRFDGSCEKP
GDSFGLLDTPKRSLACSAKQISESLGAQINPDLSWTSSFNTPSSLTPTVILPKTEERALS
VSGLKDKEAIFVRKLFPSLSKGSASNATLNDTTLKQEVIAESETLQSDDLGEKPVCSLNS
SLDTSGLWKQKVPSAIEDGDVRNTVQNVLDGAEDVLSIFFSNSTSTLRRIKTKERIRRRI
TDSSKDVKSVVLTSESEEILKDDVETKSPCKNKDITQWTPLSLSESTLNGDCSTASLINN
HNTVASSEINGCTVFNCIAESSQTFSQTVRLKSYPEGAQCQKSLLDKSPAFMLSRKSRKF
VYQVPSSDLSKTVIGHKETQPVCFDQTLKENPSVEEVSSDLNESTVASENAINNHTQPQD
FKQLSTEIHDLDLGLDMTQLSKAFAEDFTQEIMPGALLDLAVQNDQNGQMQHKAELEEKN
EDGSHSDFCNLADISMNSPNKSTVMLTTFEISHDSGCPTTFSDLDGTTTSCADIKEFLPS
FKMANNKAISIPNKAIMKAKASLDEAAGDVLINTLNRTTPKHDQTIETLCKSVSGSTNAN
RSPIEQSIFPNHASRLCVSDAPRSDSPKSFKINISSCSSPQSNESDYKTGSKRNIAVSNV
GFQTETLLKEELGSGSDSSKCIHQKLDFKRSAERQTMFNINSTHKPTAVDSSREDDEDNG
TLTASQKADVTELCNLLEEANSQHEFTQFKPTNHGSDNHTTEKEWDPDILYGIDFDDSFN
CDVVKGKHPVKTDSSSVNTSDHIQIVDAAKLPCTMSKETRNGIVPLSVAEDSSLVDGIKS
IRSHFSDNTPVHFFGFKTAKGEAMSISEKSLNNARHFFEEYDQKAIYNKEVKVDIGVIKP
EHVETEPTFSTFDSMSTENKTYLQIKQVNFSSGNVNAACKEIHKQVTENERKEQNCLGEK
TKAISWSNTSIKISQPHLVTKISDGVDKLSFNSEKVFQEQKSSSDPKEVFAKIFPSETFS
PQSEEGYGFQTASGKGVSVSASALKKAKAIFKDCDENIDLESAKMEGINDKLDVEINRVN
AFTPNCKRVTFSNVSHMEASTVLRDSELTDDFLLLPSSVQQPPQEEVCEEKGLQSDFSKH
PYELLPPNGNCGFSTASGKKVSITAGALQSGKDLLSESVDVFSCADGSPKTKQVVDIQTD
TSSIRKHKGFSTAGGKKVAVSAAGLQKAKNLFRDCEEERLSFEDLQHQNFKGFSDVSKKP
LTKIRTAFAGCRDVSFSHEHETGNSSGKNIGFTTAGGKKVAFSATALQRANSLFKDCEEE
SLASGSLQHQVCQGFSTASGKDVTVSEKALSEVRAAFAGCDDTSFCHEPENSSRNNIGFS
TAGGKKVAVSATAVQRAKSLFKDCEEENLSSEEVPPQAKSSHKSSEDMVDLNLKFEQLNK
KNYGFSTASGKGVSVSKATLEEASKLFRDCDAQVTVTDSQLLQSDSSKCRPQHKDRQTKT
TLRPLPSKTTQNEPAQLDLHSLNFNSCTDTQQKYFEQEAMACTKALLADDNLNESGSLAM
TEDQKCQSVNDLQAQGSFGHKRRKRPFDARNVADSGQPPLKRQLLLEFDRTLDTKTSGLA
PLKSCPNGTLRDRRVFSYNVHLKPDVTGPDWHPVDQKSDDLKQSCSTVSVQNRRNSDPKE
GVFVPPFQKDMKTETSNCQDVSTEVSTGFIPHFKKENKETTEHGNQIDQNMTTSVSHSDN
VAQYCDRKNLHEGSNPQPTTSVETIPLKIMDSEEKDTETCWETLNLARDMQDMRLRKKKR
QTIRPLSGSLYLAKTSGVPRIGLRDAVGRKCPGQYTQEELNQHGVHHKVSLITSENAESF
RFDCNDFFKCELLMETGAVQLADGGWLVPDNKGTVGKDEFYRALCDTPGVDPKLISDAWV
FNHYRWIVWKRASMERTFPDLMGNLCLTPAQILLQLKFRYDVEVDHSQRSALRRIMERDD
TPAKTLVLCLCGVAQTCQHPEKPVKDDKSPNAKMESCVVWLTDGWYSIKGLLDPPLSAML
NKGRLRIGDKIVTSGAELVGSQEACPPLEAPESLMLKILANSTRRAQWDTKLGYYRDPRP
ISFQLSSLFTAGGVVSCVNIVVLRSYPTQWMEKKPNGVFIFRNDRTEDREARKHSNSKHK
SMDFLISKIQTQFEKEMEGNKKSRDQRRTFSRHEVEALQDGEELYEAMERDPAVETHLYA
SQMDAVSKYRCCLEEKRQAELQERVQKAVMEAQEAEGGCPNRDVTPVWKLSITDGKDLQS
DCVYTLNIWRPSQDLYGLLREGHRYRVYNLATSEGKKRSGIAHIQFTATKKTLFQDVEVS
PEWVHQHFRARECVRFKELQNPQFSSPCGEVDIVGCIVSIEGKQGHCPLLHLVDENFDLV
SVRTYSSLEQLALEELVKPRALVALSNLQARPYSGPVPSLYAGEQAVFSVNPKESHLQEA
MTRLKTFVQTCEHFFSIVEEKVSDVVPSGVLGSFQSPRTPRVQSNPKINCRVTPQQKSSI
FSPFTPLNRRTPASACNSEGKDPKSLKRRRGLDYLSHIPSPPPLTPLKNTASPCINGTFN
PPRRSVTPKPPQNESPRASCPPPGEEKWVHDEELAMIDTQALLEG
NT seq
8058 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacaatttctttcatcaaattgacaaagagcttggacctcttaatcctgactgg
tttgaggagttgactgcaaaagcttccagagatgaaggacgtcctaacagttcaaaaggt
gaggaggaggagaagactgtcaaagtaccagagacatcagccctggccagtcagctgttt
tctacacccaaaatattcaagcaaccacactttcagtcccctgcttccattcctaatgaa
gagtctccttatgaagcggttaatggagactcatcagcatttccctggacagaatcaagc
ccttgtttgtttggttcagccaaagacagtcaaaggtttgatggatcctgtgaaaaacct
ggagatagctttggccttctggatacaccaaaaaggtctttggcatgctcggcaaaacag
atatcggagagccttggggcacaaatcaaccctgacttatcctggaccagctcctttaac
acaccatcctctttgactcccactgtgatattgcccaaaacagaggaacgcgctctatca
gtaagtggcctcaaagacaaggaagcaatttttgtgcggaaactcttcccatctctctcg
aaaggctctgcaagcaatgcaacattgaatgatacaacactaaaacaagaggtgattgcc
gaaagtgagactcttcagtctgatgacctgggagaaaagcctgtttgctctctaaattca
tctcttgatacaagtggtctgtggaagcagaaggttcccagcgctatagaggatggggac
gtccgcaacacagtgcagaatgttcttgatggtgccgaggacgtgttgtcaatattcttt
agcaacagcacttcaactctgcgaagaatcaaaaccaaagagaggatcagaaggagaata
acagattcctcaaaagatgtcaaatcagttgttctaacttcagagtcagaagagatatta
aaggatgatgtagaaacaaaaagcccctgcaaaaacaaagatatcactcaatggaccccc
ctaagtttatcagaatccactcttaatggagactgttcaaccgcgtctttgataaacaat
cacaacactgtagcatccagtgaaattaatggttgtactgttttcaactgcattgcagaa
agtagccaaactttttcacagactgtaagactcaagtcttatccagaaggagctcagtgt
cagaagtctttgttagacaaatcgcctgctttcatgctttctagaaagtccagaaagttt
gtgtatcaagtgccaagttcagatctgtcaaagacagtaattggacacaaagaaactcaa
ccagtatgtttcgaccaaacactcaaagaaaatccctcagtggaagaggtgtctagtgac
cttaatgaatccacagtcgccagtgaaaatgcaatcaataatcatacacagccacaagac
ttcaaacagttatctacagaaatccatgatcttgatctaggactggatatgacgcagctt
tccaaggcatttgcagaggatttcacacaagaaataatgccaggagcactgcttgacctg
gctgtacagaatgatcaaaatggccaaatgcaacataaagcagaacttgaggagaagaac
gaagatggtagtcacagtgacttctgtaatttagcagacatatctatgaactctccaaac
aagtcaacagtcatgcttacaacttttgaaatcagccacgacagtggttgccccaccacc
ttttcagatttggatggtacaacaacctcgtgtgcagacatcaaagagtttttaccttct
tttaaaatggcaaacaacaaggccatttccataccaaataaggctataatgaaggccaaa
gcatcattagatgaagctgcaggggatgttttgatcaacaccttaaatagaactactcca
aaacatgatcaaacgatagaaacattgtgcaaatcagtttcgggaagcactaatgcaaac
cgatcgcccatagaacaatccatcttccctaaccatgcgtcaagactgtgtgttagtgat
gctccaaggagtgacagtccaaagagctttaaaattaatatttcaagctgttcttcacct
cagtcaaatgaatccgattataaaaccggttcaaagaggaatattgcagtttcaaatgtt
ggctttcaaacagagactcttttgaaagaggaattggggagtggttcagactcgtcaaag
tgcattcatcaaaaattggatttcaaaagaagtgctgaaaggcagactatgttcaacatt
aacagcacacacaaacccactgcagtggactccagccgtgaagatgatgaggacaatggc
actttgacagcatctcaaaaggctgatgttacagaattgtgcaatcttttggaggaagca
aatagtcaacatgaatttacccagttcaaaccaacaaatcatggctcagacaaccacact
acagagaaagagtgggatcccgatatactctacggcatcgactttgatgatagttttaac
tgtgatgttgtgaaaggaaagcatcccgtcaagacggactcttcttcagtaaacacttct
gatcatattcaaattgtagatgctgccaaattaccatgcaccatgtcaaaggaaacacga
aatggcattgtacctttgtcagtggctgaagacagttctttagttgatggaattaagagt
atacggtctcatttcagtgataatactccagtccattttttcggttttaaaactgctaaa
ggggaagctatgagtatatcagaaaagagtttaaacaatgcaaggcacttttttgaagag
tatgatcaaaaagccatatataataaagaagtcaaggtggacatcggagtaataaagcca
gagcatgttgaaacagagcctacattcagtacttttgacagtatgagcacagaaaataaa
acctaccttcagattaaacaagtaaatttcagctctggaaatgtaaatgcagcgtgtaaa
gagatacataagcaagtgacagaaaatgaaagaaaagagcagaattgtttgggtgaaaaa
actaaagcaatttcttggagtaatacctctataaaaataagtcagccgcacttagtaacc
aaaatatctgatggcgtggataagctttccttcaacagcgagaaggtctttcaagaacag
aaatctagcagtgatcctaaagaagttttcgcaaagatttttccctcagaaactttttcg
cctcagtcagaggaaggctatggctttcagaccgccagcgggaaaggagtttcagtttca
gccagtgcccttaagaaggcaaaggccatatttaaagactgtgatgaaaatattgacttg
gaatctgcgaaaatggagggaatcaatgacaaactggatgttgaaatcaaccgagtaaat
gcatttactccaaactgtaaacgtgtgacattttcaaatgtgtcacacatggaggccagc
actgttctcagagactctgaactgactgatgacttcttattgctgccctcttcagtccag
caaccccctcaggaagaagtatgtgaggagaaaggccttcaaagtgacttttctaagcat
ccttatgagttgcttcctcctaatggcaactgtggtttcagtactgccagtggtaagaag
gtgtccatcacagctggagcactacaaagtggtaaggatctgttatctgagtctgttgat
gttttctcatgtgctgatggatctccaaagacaaagcaggttgttgatatccaaaccgac
actagctctataagaaaacacaaaggattctctacagcaggtgggaagaaggtggctgtc
tctgctgctgggctgcaaaaggcaaagaatctcttcagagattgtgaagaagagcgctta
tcatttgaagatcttcagcaccaaaactttaaaggtttcagtgatgtctcaaaaaagcca
ctgactaagataagaacggcatttgcaggttgccgtgacgtctccttcagccatgagcat
gagactgggaattcttcaggaaaaaacataggattcactacagccggtgggaagaaggtg
gccttctctgctactgccctgcaaagggcaaatagtctttttaaagattgtgaagaggag
agtttagcttctgggagtcttcagcaccaagtctgtcaaggtttcagcactgccagtggc
aaagatgttaccgtctccgaaaaggcactgagtgaggttagagcagcatttgcaggatgt
gatgacacctccttttgtcatgagcctgaaaattcttcaagaaacaacataggattctct
acagcaggtgggaagaaggtggccgtctctgctactgcagttcagagggccaagagtctt
tttaaagattgtgaagaggaaaatttatcatctgaggaagtcccacctcaagctaagagt
tctcataaaagcagtgaggacatggtggatttaaacctaaagtttgaacaactaaacaag
aaaaattatggtttcagtactgcgagtgggaaaggtgtgtccgtatcaaaagctaccctt
gaggaggcttctaaattattcagagattgtgacgcccaagttactgttactgatagccag
ctgctacagagtgattcctcaaaatgccgtcctcaacataaagatagacaaaccaaaacc
actctgcgtcctttgccatctaaaacaactcagaatgaacctgcacaactagacttgcac
tctttgaattttaacagttgcacagacacccagcagaagtactttgagcaggaagcaatg
gcttgcactaaagctttactggcagatgataacctgaatgaatcaggcagtttggcgatg
acagaggaccaaaaatgtcaatctgttaatgatctacaggcacagggatctttcggccat
aagagaaggaagcgtccgtttgatgccagaaatgtagcagattcaggtcagcctcctttg
aaaagacaacttctcttagagtttgaccggacattagatacaaagacctcaggcctcgca
ccacttaaaagctgtccaaacggaactttaagagaccggcgtgtcttcagttacaatgtc
cacctcaagccagatgtcactggtccagattggcatcctgtggaccaaaagtcagatgac
ctcaagcaatcatgttcaactgtatctgtccaaaatagacgtaactcagaccctaaagaa
ggggtgtttgtgcccccttttcaaaaggatatgaagaccgagacatcaaactgtcaagat
gtctctactgaagtgtccactggttttatcccacatttcaagaaggagaacaaagaaaca
actgaacatggcaatcaaatagaccaaaatatgacaacttctgtatcacatagtgacaat
gttgcacaatattgtgataggaagaacctacatgagggttctaaccctcaaccaaccact
tcagtggaaaccataccattaaaaatcatggactctgaagagaaagacacagagacatgc
tgggagaccttgaacctagctagggatatgcaagacatgagactcagaaagaagaaaagg
cagactattcgtccactatctggcagcctttaccttgctaagacttctggtgtccctaga
ataggtctgagagatgctgtggggcgcaaatgtcctggtcaatacacacaggaggagctg
aatcagcatggtgtacatcacaaggtctcactaataacaagtgaaaatgctgaatcattc
agatttgactgtaatgacttcttcaaatgtgagctcctcatggagactggtgctgtccaa
ctggctgatggaggctggttggttccagacaataagggtactgtgggcaaagacgaattt
tatagagcactgtgtgacacacctggtgttgatcccaaactgatcagtgatgcatgggta
ttcaaccattaccgatggattgtatggaaacgggcctccatggaaagaacgtttccagat
ttgatgggtaatctatgtttgactccagcgcaaatacttctgcagctaaaattcagatat
gatgtggaggtggaccacagtcagcgatccgctctcaggaggatcatggagagggacgac
actccagctaagacattagtgctttgtttatgtggtgttgctcaaacttgtcaacatcca
gaaaagccagtgaaagatgacaaatctcctaatgcaaagatggagtcctgtgtggtctgg
ctcacagatggctggtattccatcaaaggcctgttagaccctccgctctctgccatgctg
aacaagggccgtctcagaatcggtgataagattgtgaccagtggagccgagttggttggt
tcacaagaagcctgtcctccactggaagctcctgaatctctgatgctaaagattttagcc
aacagcacaagacgagctcagtgggacactaagttgggttactatcgtgaccctcggcct
atcagctttcaactatcatcactgttcactgctggaggtgttgtgagctgtgtgaacatt
gtggtgttaagaagttaccccactcagtggatggagaagaagcccaacggtgtctttata
tttcgcaacgatcgtacagaagatcgagaggccagaaaacacagcaactccaagcacaaa
tccatggattttcttatttccaaaatacagacccagtttgaaaaagaaatggaaggtaac
aagaaaagtcgagaccaaaggaggacatttagtcgacatgaggttgaagctctgcaggat
ggggaagagttgtatgaggcaatggagcgggatcctgctgttgagacccatctatatgcg
agtcagatggatgcagtgagtaagtacagatgctgtttggaggaaaagaggcaggcggag
ctgcaggagcgtgtgcagaaagctgtgatggaagcccaggaggctgagggtgggtgtccc
aatcgagatgtaactcctgtttggaagctcagcattaccgatggcaaagatctgcagagc
gactgtgtttacaccctgaatatctggcgcccatcgcaggacttgtatgggttgctcaga
gagggccacagatatagggtatataatcttgccacatcagaggggaagaaacgctcaggc
attgctcacatccagttcactgccaccaagaaaacactcttccaggatgttgaggtgtct
ccagaatgggtgcatcagcattttcgtgctcgagaatgcgtacgcttcaaagaacttcaa
aaccctcaattcagttcaccttgtggggaggtggacatagtgggatgtattgtctcaata
gaaggcaaacaaggccattgcccattactgcatcttgtggatgagaactttgacctggtc
tctgtgagaacctacagtagtctggagcagttagctttagaagagctggtaaagccgcga
gcactggtcgctcttagtaatcttcaggcgaggccatactctggacctgtgccaagcctt
tatgcaggagaacaagcagtattttctgtaaaccccaaagaatcccatctgcaagaagct
atgacccgtctaaagacttttgtccagacttgtgagcatttttttagcattgtggaggag
aaggtctcagatgtggttccttcaggtgtcttgggttcatttcagtctccaagaactcct
cgtgtgcagtctaatccaaaaattaattgcagggtaaccccacagcagaagagcagcatt
ttctcacctttcacgccactgaataggagaactcctgcatctgcatgtaacagcgaggga
aaagaccccaaaagtttgaaaagaaggcgcggtttggactacctgtcacatatcccatcc
cctccacccctcactcctctgaaaaatacagcttctccctgcattaacgggactttcaat
ccaccaaggagatctgtgactcccaaacctccacagaatgagtcacctcgagcctcatgt
cccccaccaggcgaggagaagtgggtgcatgatgaagagctggcgatgatagacacccag
gcgttactggaaggctga
DBGET
integrated database retrieval system
