Sinocyclocheilus grahami (golden-line barbel): 107559131
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Entry
107559131 CDS
T04918
Name
(RefSeq) homeobox-containing protein 1-like isoform X1
KO
K24885
homeobox-containing protein 1
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgh03000
]
107559131
Transcription factors [BR:
sgh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
107559131
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
DUF494
HTH_37
AbiJ_NTD3
HTH_31
HTH_23
Motif
Other DBs
NCBI-GeneID:
107559131
NCBI-ProteinID:
XP_016098350
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MSHYTDEPRFTIEQIDLLQRLRRTGMTKPEIVHALDTLERLDREHGDKYSRRGLSDSNAT
NSTTSSTTPTSNSTSNATMATSSTTSTATQTQFHGNLSPSPSNSYATSPPAVLPSPVSLV
AMAQNGRDALAATPNGKLSPNRYPVNSAAAVRSYGLEGSEEDLDIDDKVEELMRRDSTLV
KEEIKAFLGNRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTTPG
ATLNMRPTPVSLDEMEWRQTPPPISSAPGSFRLRRGSRFTWRKECLAVMESYFSDNQYPD
EAKREEIANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIGSFFQEATIL
ESHGIDVQSPGGHSNSDDVDANDYNEQGCDVSYFEKRGMNRPFGYYRLEPTSPTQDDAGN
HADHQDPISLAVEMAAVNHSILALSRPGGVASEIKTESLDDD
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtctcactacacagatgagccacgcttcaccatcgaacagatcgacctgctccagaga
ctgcggcgtacaggtatgaccaaacccgagatcgtgcacgcgctggacaccctggagcga
ctcgaccgtgagcacggggacaaatacagccggcgcggcctgtcggactccaacgccacc
aacagcaccacctccagcactacacccacctcaaatagcactagcaacgccaccatggcg
acctcctccaccacttccacagcaacgcaaacgcagttccacggtaatttatcaccatcg
cccagcaacagttacgccacgtctccacccgccgtcttaccctcgccggtctctctggtc
gccatggcgcagaacgggcgggacgctttggcggcgacacccaatgggaaactgtcgccg
aaccgttacccggtgaacagtgcggcagccgtgaggtcgtacgggctggaggggtcagag
gaggacctggatatagatgacaaggtggaggagctcatgaggcgagacagcaccctggtg
aaggaggaaatcaaagcctttctgggcaacagacgcatctcacaggccgtggtggctcag
gtcacaggcatcagtcagagcagaatctctcactggctcctccagcagggctcagatctc
agtgaacagaagaaacgagctttctatcgctggtaccagctggagaagacaacgccaggt
gccacattaaatatgcgtcccacccctgtatctctggatgagatggagtggcgtcagact
ccgccccccataagctctgcccctggaagcttccgtttgcgcagaggcagtcgattcacc
tggaggaaggaatgtctcgctgtgatggagagctatttcagtgataatcaatatccagat
gaagccaaacgagaggagatcgccaacgcctgcaacgctgttattcagaaaccaggaaag
aagttgtctgacttggaaagagtcacatcattgaaagtctacaattggtttgccaaccga
cgcaaagagatcaagaggagggccaatattgggtcttttttccaagaagccacaatcttg
gagagtcacgggatcgatgtgcagagtcctggaggacactccaacagtgacgacgtcgac
gctaacgactacaacgagcagggttgtgatgtttcctattttgaaaagagaggcatgaac
cgaccttttgggtactaccgtctggagcccacctcaccaacacaggatgatgccggcaat
cacgcagaccaccaggaccccatctctcttgccgtggagatggcagctgtcaatcacagc
atcctcgccctgtcccgcccgggaggcgtggccagtgaaatcaaaacagagtcactggat
gacgactga
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