Sinocyclocheilus grahami (golden-line barbel): 107559244
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Entry
107559244 CDS
T04918
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04020
Calcium signaling pathway
sgh04080
Neuroactive ligand-receptor interaction
sgh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
107559244
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107559244
04082 Neuroactive ligand signaling
107559244
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sgh04040
]
107559244
Ion channels [BR:
sgh04040
]
Ligand-gated channels
Glutamate (ionotropic)
107559244
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
NMDAR2_C
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
107559244
NCBI-ProteinID:
XP_016098476
UniProt:
A0A672MQ68
LinkDB
All DBs
Position
Unknown
AA seq
1400 aa
AA seq
DB search
MGVHLGCLSDTLWLPLLLLLSVLCAPCCQCRPFGMVEPTVNVAVVFSGSAYQMEIKGRLS
RENFLDLPLEVNPITVLVNNTNPRTLLTRICDTLAANRVHGVVFEDNIGSEAVAQILDFI
STQTAVPIVGISGGSAVVLPHKGDGSTFLQLGSSIEQQINGMFKMMEEYNWDSFVVVTSL
YPGYDTYVDYIRSFIDTSYFLWELQDILTFDMSADGMNDLRARRLLQQIDAQVLLVYCSH
DEAQYLFTIAREVGLVGPGYIWFIPSLAVGNPNMHPPDSFPIGLISIITDRWKMSLRNRV
RDGVAIVVKGVESFRKQRGFIPDGHMDCLSPERPSTNDTLYRHMLNVSWENTDFSFNSDG
YLVNPSMIIITLDRGRQWDKVGNYESGILQMRYPVWPRYGTFLEPVSDNRHLTVATLEER
PFVIVEAVDPVTGTCLSNTVPCRRQSNKTETIVGHTEPYTKLCCKGFCIDILKKLSRNIR
FSYDLYLVTNGKHGKLVRGIWNGMIGEVFYKRADMAIGSLTINEERSEIIDFSVPFVETG
ISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYFSPVGYNRSLVSAK
DLGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTANLAAF
MIQEQYIDTVSGLSDKKFQKPQDQYPPFRFGTVPNGSTERNIRSNYPEMHSHMVKYNQKG
VEDALNSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKESRWK
RPIDLALLQFLADGDTQKLQTVWLTGICRNEKKEVMSSKLDIDNMAGVFYMLLVAMGLSL
LVFAWEHLLYWKLRHSVRKSERLDFLLAISRGIYSCFNGVEDTDRRGNMQSPDVTTSYTQ
ANMLKMLQTAKDIVSSARVENSLDNATKTIENWSRRDPEAARPSLPTCLIGTDFSHSRLP
CIASVTDNHSLYPQNMDSTTQHLLEKPHMGTRPTSLRYTLPARTSHHHIYERTLPISSLS
SPHIAMRDPPPPTAPKPHVYVDQSCHHPTSRYVSYHDFQVPDIFVEHQEPSGSHKQYMAG
LGRKKRSHSYVAASPETCRRDDYDVPQSCLAELKSNQLVENHSHTTPCMRSHFQRPGSSC
NSCKKVYLETEMDDVPLLGKDNLNRRASFLRATWGGDRIRQLDEKPSTSASSTSCINMPD
LFPRVVVTNPKPSKMYSSTGNNLRYNMAVEPAYLDPAHMGSYPYKTQKFKYSKSIRLPSY
REAILQNTAALRQSSSTLVHGHYSTYLNSYTDLPVYLGPLPQGPAHFHEHSKDTCHLFPC
VNHCPENAALVPRLDSRPVLYQSTAVGGYEGARRSNQESLHTVPVSSMRRDRRQVLVARN
VHSPYAPRPWGRVSSLESEV
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttcatctaggctgtctcagcgacacactgtggctgccgttgctgctgctgctg
tctgtcctctgcgccccctgctgccagtgccgtccgttcgggatggttgagcccactgtg
aacgtggcggtggtgttcagcggctctgcctaccagatggagatcaagggtcgactgagc
cgggagaacttcctggacctgccgctggaggtgaaccccatcactgtgttggtgaacaac
accaacccgcgcaccctactgacgcgcatctgcgacactctggctgctaacagggtgcac
ggggtggtctttgaagataacattgggtccgaggccgtggcgcagatcctagacttcatc
tccacacagacggccgtgcccatagtgggcatcagcgggggatctgccgtcgtcctgcct
cacaagggtgacggttctaccttccttcagctgggctcttccatcgagcagcagatcaat
gggatgttcaagatgatggaggagtacaactgggacagttttgtggtggtgaccagcctg
tacccaggctatgacacttatgtggactacatccgctcatttattgatacgtcttacttc
ctctgggagttgcaggacatcttgacgtttgacatgtcggccgacggcatgaacgacctc
cgtgcccgccggttacttcagcagatcgacgcgcaggtgctgctggtgtactgctcgcac
gacgaggcccagtacctcttcaccatagccagggaagtgggtttggtgggtccggggtat
atctggtttatccccagccttgcagtgggaaaccccaatatgcatcctccagacagcttc
cccattggattgatcagcattatcacagatcgctggaagatgagcttgagaaacagggtc
agggatggtgtagccatcgtggtgaaaggagtggagagcttccgcaagcagagagggttt
attcctgacggacacatggactgtctgagtccggagcggccatccaccaatgacactctc
tacaggcatatgctgaatgtgtcctgggagaacactgacttttccttcaacagtgatgga
tatctggtcaacccttccatgatcataatcactctggaccgcgggagacagtgggataag
gtggggaattatgagtctggtatcctgcagatgaggtatcctgtctggccacgttatggg
accttcctggagcctgtgtctgataaccgtcacttgacagtggccacactggaggaaagg
ccttttgtgattgtcgaagctgtggatcctgttactggcacctgcctcagtaacactgtc
ccctgcagacggcagtcaaacaagacagaaacgatagtcggacacactgagccttacacc
aaactatgctgcaaaggcttttgcatagacatcttgaaaaagctctctcgcaacatcagg
ttctcctacgacctctacctggtcaccaacggcaaacatggcaagctggtacgagggatc
tggaacggtatgattggagaggtgttttataagcgagcggacatggccattggctctctg
accataaatgaggagcgctctgagatcattgacttctctgtgccgtttgtggagactggc
atcagtgtgatggtggccagaagcaatggaactgtatccccatcagccttcctggagccc
tacagcccagcggtgtgggtgatgatgtttgtcatgtgtcttacagtcgtggcggtgact
gtgttcgtgtttgaatacttcagtcctgtgggctacaaccgcagcctggtcagtgccaaa
gatctgggtggtccgacgttcaccattgggaagtcggtctggctgctgtggggaatcgtc
ttcaacaactcagtgcccattgaaaaccccaaaggcaccaccagtaagatcatggtgctg
gtgtgggctttctttgctgtgatctttctggccagctacacggccaacctggcagccttc
atgatccaggagcagtacatcgacactgtttctggactgagtgacaagaagttccagaaa
ccgcaagaccaatatcctccgttccggtttgggaccgtgcccaatggcagcacagaacga
aacataaggagcaattatcctgaaatgcattcccacatggttaagtacaaccagaaaggt
gtggaggatgcgctcaacagcctcaaaactgggaagctggatgccttcatatatgatgca
gctgtgcttaactacatggccggtaaagatgaagggtgtaaattggtgacaatcggtagt
gggaaggtatttgcaacaacaggctacggtatcgcccttcagaaagaatctcgctggaag
cgccccatagacctcgctcttctccagtttcttgctgatggtgatactcagaagctccag
acagtgtggctcactggtatctgccgtaacgagaagaaggaggtgatgagctctaagctt
gacattgacaacatggccggagtgttttacatgcttctagtggccatgggtctcagtctg
ctggtctttgcctgggaacatctactgtactggaagctacggcattctgtccgcaagtct
gagcgcttggacttcctgctggccattagcaggggaatctacagctgcttcaatggtgtg
gaggacacagaccgtagagggaacatgcagagcccagatgtcaccaccagttacactcag
gccaacatgctgaagatgctccaaaccgctaaggacattgtctcatctgcaagagttgaa
aactccctggacaatgccacaaagaccatcgagaactggagtcgacgtgatccagaggca
gccagacctagccttcctacctgcctcatagggacggacttcagccatagccgcctgccc
tgcatcgccagtgtaacggacaaccactcactgtaccctcaaaacatggatagcaccaca
cagcacttgctggagaagcctcacatgggaacacggcctacctcgctgcgctacactctt
cccgcacgcaccagccaccaccacatctacgaacgaacactacccatatctagcctcagc
agtccccatattgccatgagagacccaccacctcccacagccccgaaaccccatgtgtac
gtggaccagtcttgtcaccaccctacctctcgctacgtctcttaccatgactttcaggta
ccggacatctttgtggaacaccaggaaccttcgggaagccataaacaatacatggcaggt
ctgggtcgcaaaaagaggtcccacagctacgtagcagcatctccggaaacttgccgaagg
gatgactacgatgttccccagtcttgtctggctgagctcaaaagtaaccaacttgtggaa
aaccattcccataccacaccctgcatgagaagccacttccagagacctggctctagctgc
aactcctgcaagaaggtgtatctagaaacggagatggatgatgttcctcttctggggaaa
gataatctgaaccgccgcgcctcttttctcagggccacatggggtggtgacaggatccgg
cagctggatgagaagccctccacctctgcatcctctaccagttgcatcaatatgcccgat
ctgttccctcgagtggtggtgaccaatcccaagccttcgaagatgtacagcagcactggt
aacaacctacgctacaacatggctgtggagccagcctatctggacccagctcacatgggc
tcctacccatacaagacacagaagttcaagtactcaaagtctatccgccttccttcatac
cgggaggcaattctacagaacacggcagcccttcggcaatcctcttccacactagtgcac
ggacactactcaacatacctgaactcttacacagacctgccggtgtatttgggtcctctt
ccgcaaggacctgctcacttccatgagcattccaaagacacgtgccacctgtttccatgc
gtcaaccattgtccggaaaatgccgccttggttccccggttagacagcagacctgtgttg
taccagagcactgctgttggaggctacgagggggccaggcgctcaaaccaggagtcattg
cacactgtaccggtctcttccatgcgcagggaccgcaggcaggttctagtggcacggaac
gtacacagtccctatgccccacggccctggggtagggtatctagtctggagtcagaggtt
tga
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