Sinocyclocheilus grahami (golden-line barbel): 107559390
Help
Entry
107559390 CDS
T04918
Name
(RefSeq) laminin subunit alpha-1-like
KO
K05637
laminin, alpha 1/2
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04510
Focal adhesion
sgh04512
ECM-receptor interaction
sgh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107559390
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107559390
09142 Cell motility
04820 Cytoskeleton in muscle cells
107559390
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_G_2
Laminin_EGF
Laminin_N
Laminin_II
Laminin_B
Laminin_G_3
Laminin_I
RVT_1
Motif
Other DBs
NCBI-GeneID:
107559390
NCBI-ProteinID:
XP_016098672
LinkDB
All DBs
Position
Unknown
AA seq
2532 aa
AA seq
DB search
MGAMKWEKDTSYETQVERSDDLVLLSSTPQGLQQHLDLLDNYCQNWAQAVNLKKISIMVF
QKKPRCQEHRYQFSLEHTMQYTYLGLIVTASGSFSLAVFQVAYIIIKAANSPRPGNWVLE
RSLDGVDFQPWQYYAISDTECLTRYNITPRLGPPTYKRDDEVICTSYYSRLVPLEHGEIH
TSLINGRPSADDLTPELLEFTSARFIRLRLQRIRTLNADLMTLSYRDPKDVDPIVTRRYY
YSIKDVSVGGMCICYGHAQSCPWDPVTKKLQCVCEHNTCGESCNECCPGYHQEPWQPGTL
SDGNTCEKCNCHNKAEDCYYNQTVADLRLSVNTLGLFVGGGVCVTCSQNTAGVNCQTCAD
GYYRPHQVSPYSDNPCVKCQCDTRGSASPVCIRDDNHTNPDAGLSAGQCLCKEGFAGEKC
DRCAFGFRDFPQCTRCECNLAGSHNVDPCSECVCKVNVMGSNCDLCKQGFYNLQDSNPEG
CTECFCFGVSDVCESSTWFTSSVEHRDGVLLRPLQSSSIFTSPVSDDNLIVSNLSASAGV
RSEWSWAAPESFLNNKLTSYGSFLNYSVAYDTSEDNVDRTLQAHFSVIIEGNGRMLREAR
SARLLLNAHTEQHVSLLMLPQTLRDARSGSRVQRDELMTVLADVAALRVRAQLEDSAEGT
LRLSSVSLGVGDTSSGLSKVPLDVEQCECPWGYSGTSCEYCVPGFYRVGGILFGGNCLQC
ECNDHAAECDINGECLGCAHNTTGPHCDHCMLGFYGDASEGTPDDCQRCSCPLTLESNNF
SPTCVLQRPGEFTCDQCQLGYAGAKCERCADGYYGDPAEPGRQCLACECNGNVDRAEAGH
CDGRSGECLKCLGHTAGRHCERCTHGFYGDAVTLKNCQACGCHGDGSLSTVCHVITGQCE
CKAHVIGQTCGRCQAGYYGIRSGDGCRLCECNQSGALSASCDEEGRCQCITGVTGDKCER
CERGYYSFTESGCTPCDCAHTHGDCNADTGECICPPHTLGLKCEECEEGHWGHDGVSGCT
ITLGSAPALLRVVSQSDLQGTLEGVSYSDQEMLLDTSHLHSLSVLTGPYYWRLPISNISL
DTALEADEAPQGGDVARLVETCECPLGYAGLSCQECAPGFYRQAVSELNMKGRKRPLIRP
CVPCRCNNHSLSCDLDTGECLGCQHSTAGEHCHVCAAGYYGKVQGSVRDCSLCTCPLRGQ
SFSSTCVLEGAGDFRCDRCEAGYEGRYCESVYVSRSAVSVLEKVQEEMSKPFSHNRFGQE
NISTTLTTHSQRLLQVQEALNTAESHNNHSRHLLDDIQTSLQTLTISRNNVSSLKQEVET
QVQEAQDLLSDALNIAEDMRNGTATLDETRNDLEGWSPSLRKHVDALVMDLTRRDALQLV
YRAEDHAQALRKQAQALNSSLSEVRSAAVNATSATQTNTNLREHTQLAEDLAHAANQSAS
SALNLTSESEHSLTEQGKTALQKSSENLDTSGSLKNHTEGLVFSVREVTSRLSLARASVQ
NVTQLLPEALHILRNLPNGSRAEVLEAKQQQEAVNASLQEALERLEDYRVKLQESSSAVG
SANNSIRSTNQLLRDSEETASAARSRLSEAHLKTERLFDRLKPLQTLGENLSRNLSQIKE
LIRQARKQAASIKVSVSADKDCVRAYRPEVSSSNFNTLTLTMKTSEPDSLLFYMGSSSAS
VISSFHFDGSGFSVLEKSLRSMSTSVVMFFKTLSPNGLLLYLASNGTRDFLSIELVEGKV
HLTFELGSGALTLTSNRTYNTGTWYRIALQRNKRRGHLSVMAADKPSEREVMEAESPGSA
SDLNRSDLDPIYIGGLPASRPIRRQVVARSFVGCMKNVEIARTNFDLLRESYGVKKGCVL
KPIRSVSVFGGGFLQMPAVLLAPHTEIMSSFSSRRERGVILAGFSSSAGRSRRHTQQPFL
VVMLVSGSLEVHVGGAEGGAMHRAVVKSQNGSFSDGQEHSLILQRNKRSIAVFVDEQNQA
TVKLGLSADKALALERLFIGGVPPGETGSSDSFYGCIRNTAVDGMLLDLSSALRYEDVDM
DSCLLEERPKRVVLPDELEAEPTSDPATRPLSPSVELSALTPGSSSVSHTHTLAACLRDV
MFSGVQMKLSAALSSHAAGSCFRRAQSGSFFSGSGYAAFMKEGYNVGSDVSVSLDFRSTA
PDGVLLGISSTKVDAIGLELVSGQCVLIVNSALVSSQVVFNVNNGAGRITARSRSAVSMC
DGRWRTLVAKKQKHSLSLTVDGVTVTAENPYSSSTSAETKNPIYVGGYPADVKQNCLSST
EPFRGCMRNLRVFKGHVTDELDFSAAFAHPHVTHSLAACLRDVMFSGVQMKLSAALSSHA
AGSCFRRAQSGSFFSGSGYAAFMKEGYNVGSDVSVSLDFRSTAPDGVLLGISSTKVDAIG
LELVSGQVVFNVNNGAGRITARSRSAVSMCDGRWRTLVAKKQKHSLSLTVDGVTVTVENP
YSSSTSAETKNPIYVGGYPADVKQNCLSSTEPFRGCMRNLRVFKGHVTDELDFSAAFAHP
HVFPHSCPDNAA
NT seq
7599 nt
NT seq
+upstream
nt +downstream
nt
atgggggcaatgaaatgggaaaaagacacaagttacgagacacaagttgaaaggagtgat
gatctggtgctgctgtcatccaccccacagggactacagcagcacctggacctgctggac
aactactgccagaactgggcccaggcagtaaacctcaaaaagatcagcattatggtcttt
cagaaaaagcccagatgtcaggaacacagataccagttcagtctagaacacacgatgcag
tacacttacctcggcctgatcgtcactgcatcggggagtttcagtttggcagtcttccag
gtggcgtacatcatcatcaaagcggcgaactctccgcggcccgggaactgggttctggag
cgctctctggacggagtggacttccagccgtggcagtactacgccatcagcgacaccgag
tgtctgacccgatacaacatcacaccccgcctcgggccgcccacctacaagagagacgac
gaggtcatctgcacatcctactactcgcgcctggtgccgctggagcacggcgagatccac
acgtctctcataaacggccgtcccagcgcagatgatctgaccccagagctgctggagttc
acctccgctcgcttcatccggctgcgtctgcagaggatccgaacgctcaacgccgacctc
atgaccctcagctaccgcgaccccaaagacgtggaccccatcgtcacccggcggtattat
tactccatcaaggacgtctcggtgggcgggatgtgtatctgttatggccacgcccagagc
tgcccctgggaccctgttactaagaagctgcagtgtgtgtgtgagcacaacacttgtggc
gagagctgtaatgagtgttgccctggataccatcaggagccgtggcaacctggaacgctt
tccgatggaaacacatgcgagaaatgtaactgtcacaataaggctgaggactgttactac
aatcagacggtggcagatctgcggctgagtgtgaacacactcggtctgtttgtgggagga
ggagtgtgtgtgacctgctcgcagaacacagcgggagtgaactgccaaacctgtgcggac
ggatactacagaccacaccaggtgtctccgtactctgataacccgtgtgtcaagtgtcag
tgtgacacgagaggttctgcgagtcccgtgtgcatcagagatgataatcacacgaacccc
gacgcaggtctgtccgccggtcagtgtttgtgtaaggagggttttgcgggtgagaagtgc
gaccgctgtgcgttcggattcagggatttcccacaatgcactcgctgcgagtgtaatctg
gctggaagccacaacgtcgacccctgcagcgagtgtgtgtgcaaggtgaatgtgatggga
tctaactgtgatctgtgtaagcagggcttctataacctacaggacagtaatcctgagggc
tgcacagagtgcttctgtttcggagtctcagatgtgtgtgagagctccacctggttcacc
agctcggtggagcacagagacggcgttctcctccgacctcttcagagctccagcatcttc
acgtctcccgtctcagacgacaacctcatcgtctctaacctctctgcgtccgcaggagtc
cggtccgagtggtcgtgggccgcgccggagtctttcctcaacaacaagctgacgtcatat
ggaagtttcctgaactacagcgttgcttatgacacgtctgaggataacgtggaccgaacg
cttcaagctcatttcagcgtaattattgagggaaacgggcggatgctgcgtgaggctcgg
tccgctcgtctgctgctgaacgctcacaccgagcagcacgtctcgctcctgatgctgccg
cagacgctccgagacgctcgcagcgggagccgcgttcagagagacgagctgatgacggtg
ctggcggacgtcgctgcgctcagggttcgagctcagctggaggacagcgccgagggaacg
ctcaggttgagttcggtgtctttaggtgttggagacacaagctcgggtctctctaaagtc
cctctggatgtggagcagtgcgagtgtccctggggttattctggcacttcctgtgagtac
tgtgttcccgggttttatcgggtcggtgggattctgttcggaggaaactgtcttcagtgc
gagtgtaacgatcacgcagcggagtgcgacatcaacggagagtgtctgggctgcgcacac
aacaccacggggcctcactgcgatcactgcatgctgggtttctatggcgacgccagcgag
ggcacaccggacgactgccagagatgctcctgcccactgacactggagtccaacaatttt
agccccacgtgcgtgctgcagcgtcccggtgagttcacctgtgatcagtgccagctggga
tacgccggagccaagtgtgagaggtgtgctgacggttactatggcgaccccgcggagccg
ggccggcagtgtttggcatgtgagtgtaacggtaacgtggatcgggctgaagcgggtcac
tgcgacggacgcagcggagagtgtctgaagtgcttgggtcacacggcggggagacactgt
gagcgctgcacacacggcttctacggcgacgccgtgaccctcaaaaactgccaggcctgc
ggttgccatggtgacggctctctgtccaccgtgtgtcacgtgatcacgggtcagtgtgag
tgtaaggctcacgtgatcggacaaacctgcggccgctgtcaggcgggttattacggcatc
cgcagcggcgatggctgcagactgtgtgaatgtaaccaatcaggcgctctgtctgcgtca
tgtgacgaggaggggcggtgccagtgcatcaccggggtgacgggtgataagtgtgagcgc
tgtgagcgcggatactacagcttcaccgagagcggatgcacaccgtgtgactgcgcacac
acacacggggactgtaacgcagacacgggcgagtgcatctgtcctccgcacacactcggc
ctgaagtgtgaggagtgtgaggaaggtcactggggtcacgacggcgtgtccggctgtacg
atcacgctgggctctgctccggctctgctgcgtgtcgtgtctcagagtgacctgcagggg
acgctggagggagtttcttacagcgatcaagagatgctgctggacacgtctcacctccac
agtctgtctgtcctcaccggcccgtattactggagactcccgatctctaatatctctctg
gacacggctctggaggcggacgaggctcctcagggtggagatgtggcgcggttggtggag
acgtgtgagtgtccgctgggatacgctggactctcctgtcaggagtgtgctccggggttt
taccgtcaggccgtgtccgagctcaacatgaagggcagaaagcgtccgctcattcggccc
tgcgtcccctgccggtgcaacaaccacagcctgtcatgtgacctggacacgggcgaatgt
ctgggctgccagcacagcaccgcaggagagcactgccacgtctgcgccgcagggtattat
gggaaggttcagggctccgtcagagactgctcgctgtgcacctgtcctcttcggggtcag
agtttcagctcgacgtgtgtgttagagggcgccggtgatttccgctgtgatcgctgtgag
gcgggatacgagggccgttactgtgagagtgtgtatgtgagcaggtctgcagtgtctgtg
ctggagaaggttcaggaggagatgtcaaaacccttcagtcacaaccgcttcggacaggag
aacatctccacaaccctcaccacacacagccagcggctcctgcaggtccaggaggcccta
aacacagccgagagccacaacaaccacagcagacacctgctcgacgacatccagaccagc
ctacagacgctcacaatctccaggaacaatgtcagcagtctgaaacaggaagtagaaacg
caggtacaggaagctcaagacctgctgagcgatgccctcaatatcgctgaagacatgagg
aacggcacggctactctggatgagacgaggaatgatctggaaggatggagtccgtctctc
aggaagcatgtggacgctttagtgatggacttgaccagaagagacgccctacagctggtg
tacagagccgaggatcacgcacaagctctccgcaaacaggcacaagctcttaacagttct
ctttctgaggtcaggtctgcagcagtaaacgccaccagcgccactcaaaccaacaccaac
ctcagagaacacacacagctggctgaagatctggcccacgccgccaatcaaagcgctagc
tccgccctcaatctgacgtctgagtccgagcactcgctgactgagcaagggaagacagcg
cttcagaagagttcagagaatctggacaccagcggatccctgaagaaccacacagaaggg
ctggtgtttagcgtccgtgaagtgaccagcaggttgagtctggctagagcgagcgttcag
aacgtcacacagctgctcccagaagccctgcacatcctgagaaacctccctaatggcagc
agagctgaagtgctcgaggcgaagcagcagcaggaagcagtgaatgcatctttacaggaa
gctctggagcgtctggaggattatcgtgtgaagctgcaagagtcgtcttctgctgtgggc
tcggctaataacagcatcaggagcactaaccagctactcagagactcggaggagaccgcc
agcgcagccagatccagactgagcgaggctcacctgaagacagagcgtctgttcgaccgt
ctgaaacccctgcagacgctgggagagaacctgagcagaaacctgtcgcagatcaaagag
ctgatccgtcaggctcgcaagcaggcggcgtcgattaaagtgtctgtttctgcggataag
gattgcgtgcgagcgtacagaccagaggtgagctccagtaacttcaacacgctcacgctg
accatgaagaccagcgaaccggacagcctgctcttctacatgggcagcagcagcgccagc
gtgatttcgtcgttccacttcgacggcagcggtttctctgtgctggagaagtccctgcgc
tccatgtccaccagcgtggtcatgttcttcaagactctctctcctaacggcctgctgctg
tatctggcctccaacggcaccagggacttcctgtccatcgagctggtggaagggaaggtt
cacctgacctttgaactgggctccggagcactgaccttgacctccaacagaacatacaac
accggcacctggtacagaatcgccctgcagaggaacaagcgccgaggtcatttgtcagtc
atggccgctgataaaccctcagagcgagaggtcatggaggcggagtcaccgggttcggcc
tctgacctcaatcgctctgacctcgaccccatctacatcggcggattaccggcctctcga
ccaatcaggaggcaggttgtggctcgctctttcgtcggctgtatgaagaatgtagaaatc
gctcgcacaaacttcgacctgctcagagagtcgtatggagtgaagaaaggctgcgtcctc
aagcccatccgcagcgtgtcggtgttcggcggaggttttctgcagatgcccgccgtcctc
ttggctcctcacacggagatcatgagcagcttctccagcagacgagagcgcggcgtgatc
ctggcgggattcagcagcagcgcgggacgctcgcgccgacacacgcagcagccgttcctg
gtcgtgatgctggtgtccggatcgctggaggttcatgtgggcggggccgagggcggggcc
atgcacagagcagtcgtcaaatcacagaacggctccttcagtgacggacaggagcattcg
ctcatactgcagaggaacaaaaggtccatcgcagtgtttgtggacgagcagaaccaggcg
acggtgaagctgggcttgtctgcagataaagctctggctctggagcggctcttcatcggc
ggcgttcctccgggagagacgggatccagcgactccttctacggctgcatcaggaacact
gcggtggacggcatgctgctggatctttcctctgctctgcgctatgaggacgtggacatg
gacagctgtttactagaggagagacccaaacgtgtggttctgcctgatgagctggaggcg
gagccgacctctgaccccgccacacgacccctgtcaccctcggtggagctgagcgcgctc
acacccggcagcagcagcgtgagtcacactcacactctggcggcgtgtctgcgggacgtg
atgttcagcggcgtccagatgaagctgagcgctgcgctgtcgtctcacgccgcgggctcc
tgcttcagacgcgctcagagcggcagcttcttcagcggcagcggatacgccgctttcatg
aaagagggctataacgtgggctcggacgtctccgtgagtctggacttccgctccacggcg
ccggatggggttctgttgggaatcagcagcactaaggtggacgccatcggcctggagctc
gtcagcggacagtgtgtgctgatagttaatagtgcgctcgtctcgtcacaggtggtgttt
aacgtgaataacggcgcgggccggatcactgcgcgcagcaggagcgctgtgtccatgtgt
gacggccgctggcgcaccctggtggccaagaagcagaagcacagcttgagtctgaccgta
gacggtgtgacggtgaccgcggagaacccgtactcatcctccacctcggccgagaccaaa
aaccccatctatgtgggcggatacccagcggacgtgaagcagaactgtctgagctccaca
gagccgttccgcggctgcatgaggaacctgcgcgtgtttaagggccacgtcaccgatgag
ctggacttcagcgccgccttcgctcacccacacgtgacacacagtctggcggcgtgtctg
cgggacgtgatgttcagcggcgtccagatgaagctgagcgctgcgctgtcgtctcacgcc
gcgggctcctgcttcagacgcgctcagagcggcagcttcttcagcggcagcggatacgcc
gctttcatgaaagagggctataacgtgggctcggacgtctccgtgagtctggacttccgc
tccacggcgccggatggggttctgttgggaatcagcagcactaaggtggacgccatcggc
ctggagctcgtcagcggacaggtggtgtttaacgtgaataacggcgcgggccggatcact
gcgcgcagcaggagcgctgtgtccatgtgtgacggccgctggcgcaccctggtggccaag
aagcagaagcacagcttgagtctgaccgtagacggtgtgacggtgaccgtggagaacccg
tactcatcctccacctcggccgagaccaaaaaccccatctatgtgggcggatacccagcg
gacgtgaagcagaactgtctgagctccacagagccgttccgcggctgcatgaggaacctg
cgcgtgtttaagggccacgtcaccgatgagctggacttcagcgccgccttcgctcaccca
cacgtcttccctcactcctgcccggataacgctgcctaa
DBGET
integrated database retrieval system
