Sinocyclocheilus grahami (golden-line barbel): 107559925
Help
Entry
107559925 CDS
T04918
Symbol
dhx15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107559925 (dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sgh03041
]
107559925 (dhx15)
03009 Ribosome biogenesis [BR:
sgh03009
]
107559925 (dhx15)
Enzymes [BR:
sgh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107559925 (dhx15)
Spliceosome [BR:
sgh03041
]
Complex A
U2 snRNP components
U2 related factors
107559925 (dhx15)
Complex B
107559925 (dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
107559925 (dhx15)
Ribosome biogenesis [BR:
sgh03009
]
Eukaryotic type
90S particles
Helicases
107559925 (dhx15)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
AAA_19
Glyco_hydro_98M
AAA_25
nSTAND3
SRP54
Flavi_DEAD
Atrophin-1
AAA_29
AAA_7
DUF3915
Motif
Other DBs
NCBI-GeneID:
107559925
NCBI-ProteinID:
XP_016099440
LinkDB
All DBs
Position
Unknown
AA seq
702 aa
AA seq
DB search
MSKRHRLDLGDDYSSSKKRSSDGKDRDRDRDDRSKDRDRDRDRDRDRDRDRDRDSKVSSV
PLSSSVSGGGMLPLKQTAMQQQINPFTNLPHTPRFFEILKKRLQLPVWEYKERFNDILNR
HQSFVLVGETGSGKTTQIPQWCVDMVRALPGPKRGVACTQPRRVAAMSVAQRVADEMDVM
LGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDIL
MGVLKEVVRQRSDLKVIVMSATLDAGKFQVYFDSCPLLTIPGRTHPVEIFYTPEPERDYL
EASIRTVVQIHMCEEDEGDVLLFLTGQEEIDEACKRIKREIDDLGPDVGDIKIIPLYSTL
PPQQQQRIFEPPPPRKPSGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIR
VESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVL
QLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLVALNDDGDLTELGSMMAEFPLDPQLA
KMVIASCDFNCSNEILSITAMLSVPQCFVRPTEAKKAADESKMRFAHIDGDHLTLLNVYH
AFKQSTYVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDI
KPEWLVKIAPGYYEMSNFPQCEAKRQLERIVAKLQTKEYSQY
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacggcaccggttggacttaggcgatgattattcgtcgagcaagaagaggtca
tctgacggtaaggaccgagaccgagatcgggacgaccggtcgaaggatcgcgatcgcgac
cgtgaccgagacagagaccgtgatcgagaccgggatagagacagcaaggtgtccagtgtg
cccctcagctccagcgtgtccggcggtgggatgctcccgctgaagcagacggcaatgcaa
cagcagatcaaccccttcaccaacctgcctcacacgccgcgcttcttcgagatcctcaag
aagaggctgcagctgcccgtctgggagtacaaagaacgctttaatgacatcctcaaccga
catcagagctttgtgctcgttggagagacaggctctggaaagaccacacagatccctcag
tggtgtgtggacatggtgagggccctcccgggccccaagcgtggtgtggcttgtacacag
ccacgtagggtggcagccatgagtgtggctcagagagtggcagatgaaatggatgtcatg
ctggggcaggaggtcggatactccatcagatttgaggactgtagctctgcaaagaccatt
ctgaaatatatgacagacggtatgttgctccgcgaggctatgaacgacccactgttggag
cgatacggtgtcattattctcgatgaggctcacgagcgcaccttagccacagatattctg
atgggcgtcctcaaagaagtggtccggcagagatccgacctcaaggtcatcgtaatgagc
gccactctggacgctggaaagttccaggtttatttcgacagctgccccttgctgaccatt
cccggccggacgcatcccgtggagatcttctacacgcccgagccggagagggattaccta
gaagcgtccattcgcacggtcgtccagatccacatgtgtgaggaagatgagggagatgtg
ctgctcttcctcaccggacaggaggaaatcgatgaagcctgcaaacggatcaaacgtgag
attgatgatctcggccccgatgttggtgacatcaaaatcatcccgctctactccacgctg
ccaccacagcaacagcagaggatcttcgagccgcctccaccccgcaaacccagcggagcc
atcggcaggaaggttgtggtttctacaaacatcgctgagacatccctcaccatcgatggc
gtggtgtttgtaattgatcctggctttgccaagcaaaaggtgtataaccctcgcattcga
gttgagtcactgctcgtaacggctattagtaaggcttcggcccagcagagagccggccgt
gctggacgtacgcgcccaggaaagtgcttccggctctacaccgagaaggcctacaagact
gagatgcaggataacacataccctgagattctcaggtcgaatttgggctctgtggtgcta
cagctcaagaagctcggtatcgatgacctagtgcactttgacttcatggacccaccagct
cctgagaccctgatgcgagccctggagctgttgaactatctggtggcgctgaatgacgac
ggtgacctgacggagctgggctccatgatggctgagttccctctcgacccccagctggcc
aagatggtcatcgccagctgcgacttcaactgctccaatgagatcctctccatcaccgca
atgctatcagtcccacagtgctttgtgcggcccaccgaagctaagaaggcagccgacgag
tccaaaatgaggttcgcccacatcgacggggaccacctgaccttgctcaacgtctaccac
gccttcaaacagagtacgtatgttgctcacctggagcgcaccggccactatctcacagtg
aaggacaaccaggtggtccagttgcacccttccaccgtactggaccacaagcccgagtgg
gttctctataacgagtttgtgctgaccaccaagaactacatccgcacctgcactgatatc
aaacccgaatggcttgtgaaaatcgctccaggatactacgaaatgagcaacttccctcaa
tgcgaggctaagaggcaactggagcgcatcgtcgctaaacttcaaaccaaggagtactct
caatactga
DBGET
integrated database retrieval system
