Sinocyclocheilus grahami (golden-line barbel): 107560194
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Entry
107560194 CDS
T04918
Name
(RefSeq) AT-rich interactive domain-containing protein 1B-like
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107560194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgh03000
]
107560194
03021 Transcription machinery [BR:
sgh03021
]
107560194
03036 Chromosome and associated proteins [BR:
sgh03036
]
107560194
Transcription factors [BR:
sgh03000
]
Eukaryotic type
Helix-turn-helix
ARID
107560194
Transcription machinery [BR:
sgh03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107560194
Chromosome and associated proteins [BR:
sgh03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107560194
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Rv0078B
Motif
Other DBs
NCBI-GeneID:
107560194
NCBI-ProteinID:
XP_016099792
LinkDB
All DBs
Position
Unknown
AA seq
1930 aa
AA seq
DB search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NT seq
5793 nt
NT seq
+upstream
nt +downstream
nt
actaccccagctcccggtgtcaacgttgggggctttcagaggttccccggacaaaaccag
cagcacccttctggagctacacccaccctaaaccagctcctgacatctccgagtccgatg
atgcgcggatatggcagcggctatcaagactacagcaccccgcagcagcagcagcagcag
tccggcatgggtctgggcaaagacttgagctccccgtacagccccgctgccagccacggc
tggggagcacaacacagaaaccacccggccttgagccccggcaataacgggaacagcaga
gctcaggtggcacctatggaccctatggccatgaagcgttctcagatgtatgggatgggc
aacagtccctactctcagccgggcggaacatatccagggcagccatacggatcacccacc
cctcaccgatacccaatgggaatgcaggggcgtggccaagtgggcatgggagggatgcag
taccctcagcaacagcagatgccggctcaatatgggccacagggaatgggcggctactgt
caacagggtcagcccccatacttcagtcctccacagcatcagtctgcggccccctctcaa
cccccctacatgcagcagcgcgctccaacacaacaggagactctgcaggagggatatggt
agcaggggccagtctgggaaaccaaaccacgatgacatgggtcttactcagcaggaccgc
ccgtccagcctcccggatctgtctggctctatagacgacctccccaccggaacagaggcg
ggtctcagttcggccgtcagcgcttcgggttccaccagtagccagggagaacagagtaac
cccgcccagtcacccttctcgccccacgcctcgccccgggtccccagcatgcgcagcggg
ccctcgccctcgccggttggatcacctgtgggttccagccaatcacgatctgggcccata
tcacctgccagtgggccaggtacacagatggcccctcagaccccagggaacgttccagac
gtgggctcccattccactcacagtcagtcgcccatgtctcaggagagaggatttgcacct
aacatgcagcgcaatgcacctggtccccagtttgtaggccagcagcctggaccttctatg
tctccacactcctgtcccactggccctatgcaacatagtgtgggctcctatcagctgggc
ccctcttatgggccccagagtggccagtatggtccttcaggtaactacccacgcccttct
aactatggcggagcaccaggtgccaactacagcggccccggcccaggcatgggcaacagt
cttggcatgaatgccagcagtccaatgcacgggcagggtccagggcaaccctgtggctct
gtgaccacggctcgaggaccagggcaagcagccagtggccggccgtacccagcaggctcc
agcagtgtggctccaacctcacccaacatgcctcagtctgctggcccaggaatgggtcca
cctcctcccaacgtcagtcgcaaaccccacgagagtggccctgcatctggccagcagaac
ccagtgccctctggacagccccggcctccctttggcaggtcccctgtatacccgggcctg
tctgggcctgggggacggcaagcctccttccctatccctcacccccatcaccctcactac
agttctgggcaaggccagaggcagcctcacgctgagctgtatgggccaggcgggtatcag
ggtgggccccacatgcttgggatgggtcctgcaggcccctacaaccatccaccgagcaac
agctcagccaggatgacccctcaaggaccgtcctacaacacaatgcccacagggcccatg
acaggctcaggggacagcatgatgcccaccgatcccaaacagagaactgagcacaaggag
gagggcagcacacccaccacagtgcctcctaagccaaaggacaactacggctctcagtgt
gtgtcccagcctcccaccccgtcccctctgtcccccagcccagctagtctgtcctcttat
cagggggacgacagcgatagcattagcagccctgcctggccaaagaaccccagcagccct
aagcacagctcggggaacatgacatacgagaagataacacgactgtacgacatgggctgt
gagccggagaggagggcatgggtggatcgctacatcgccttcatggaggagaggggcacg
cctgtccccaacctaccttcagtgggcaagaagccgctggatctgtgccgcctctacctc
tgtgttcgagaaatcggaggcttggctatggtaaataagaacaagaaatggaaagagctg
tccacccacctgaatgtggggacatccagcagctctgccagttccctcaagaagcagtac
atccaatacctgttcgcctacgagtgcaaggtggagcgcggagaggaacccccacccgat
gcgttcaccatgggagacagcaagaagcacccacagcagaacaagatccagccaccctca
cccgcaaactcaggctctcttcaagggccgcagactcctcaatctacaggcagcagcact
atgacagagatgccaggggacctaaagccgccaacaccagctaccacaccccacggacaa
gtgacccctcagctaactggcagaaacagtggtgttagtgtgcaagatccgttctctgaa
agcagtgacccagccttccaaaagcgaggccccatgcatggaggaggcagcggagatgcc
acctctagaatgcagtttgacaccagtaaggatccctatggagctgctaggaaaggtggc
tctgagcccttcatggcagggcagatgccaggcagtggcatgcaggatatgtatccacgt
ggaccgccctcagggatgggtatgggcccacgaccccagtacccctacaaccctggtttt
gagaggccagaccatgtcatgggtccagaggggggaattgctccccctggaaatcagaac
aacatggtgccttccaatagtgatcccagcatgttctcaggcaatagatacgcctctcat
cagagacatggacatgacggctatgggcagcagtacactcacagtatgccatatggcgca
catgggatgtatccccaacagcagggttataagcggcctggggaagggatgtatggccct
cctgctaagcgccatgagagtgaagcctatggtttgcagtacggtggccagcagcctgac
atgtatagccaatatggttacccagagcgcagacccatgcaaagtccattcccctatcca
tatggacgtgatcgcatgcagccaggtgggcagggacctcctcagcacagcatgatgagt
ggtggaccacccccatcctccaactccagcggtggtcctcaagggaacatgtggcacacc
aggcatgacatgagttacccttaccccagccggcaggctcatggggtcccctacccctcc
atgagccgtggagatgatccagaaattagggctagtcaggacagtcagtggcctggtcag
cgtcaatccccctacccaccacactctttgtcctcttccagctccatgccccccatggct
agccggcaaccaccttcttcctatcaatctcctccagcgatgccaaaccatatctctcga
gtcccaagccctgcaccattccctcggtctgtgggtggctctatgtcacccaataaggct
catatgatggcctctatgaagcagatgcaaaagccgggtggcccagggtccatgccaagc
tctcaaactggtggtcatcctgggcaaggcttcccagcaatccatcgggaggtcacttac
ccattagactctgtggagggaacgcagcctcagcttaaaccccgacgaaggttaacatcc
aaagaaattggcacaccagaggcttggcgtgtgatgatgtccctgaagtctggtttgctt
gctgagagcacatgggccctagacacaataaacatcttgctatatgatgacaacacagtg
ccttcctttggcttatctcagatgcccggtttcttggagctcattgtggaatatttcaga
aggtgcttaatagagatctttgggatccttgaagaatatgaagttggaacagagggtcag
aaaactcttcttggtccatgttcggagcccacagaaacagagcaaccttccaatcaagac
ttaaaaagccaattcagtacagaacatgtggggagattagatgtggagcctgagaaacct
cagccaagcagctcagcagcagcactcaatatggagaaaagggaagactctcccgagggt
aaggccgacactgctaaagaaccatgtcctccagtggagcccagacccaagcaagccagc
aagtatgacaaactcccagtgaaagttgaggagagagaggctgtggctgattgtgtggag
gatcgatcagagctgctaggcctggccggggagttcaccagcgggcttctgcattggaag
gcaggcggaggggactccactgcccacatccagacccatttcaagaaacgtagggaagaa
gaagcaaaacagaagctcttagagtatcaggaaggttcacaggcaccaggacaagaaacg
gttgaagaggagcatgggagggaagaggaactgaaaagagagcttccagggccctcagag
gagaacttgacagccactgtggatgacatgctaagttctcgtccagggtccttatcagga
ggtgaaacccagacatcattccccttccgcaacagagagaaccagagcagcattactttg
ctggaggatgagccccgatgctgggatgaagcacctctttcagtcgccgagagctggcag
gatgagttggccaagcgctgcatctgtgtgtccaatatcattcgtggactctccttcgtc
ccggccaatgacagtgaattggctcagcacccaggtttagtgctcattctcggaaaactt
gtgcttctgcatcatgagcaccctaaaaggaaaaggatgctgccgacctaccagcgagag
gaagagcgaggtctggcttgcagcaaggacgaatggtggtgggactgccttggtgccttg
cgcgagaacaccttggtcacccttgccaacatttcaggacagctagacctgtctatctat
ccggaaagtatctgccttccaattctaggcgggctactccactggatggtgtgcccttcg
gcggaggcccaggaccccttttgcacagtaaatggcttctcctcgctcacaccacagagg
ctggtgctggagtgtctgtgcaaactgagcatccaagactctaacgttgaccttctgctg
gccacgcctccttttagcagacaggagcgcctctttgccacattagtgcggcacgtcggt
gagcgaaagagtcaggtgtgccgcgagatggccgtagccattctctccaatcttgcacag
ggcgaccccacagctgcccgagccgttgccctgcagaagggcagcgtgggagccttgata
agcttcctagaggacagcatttccatggcacagtatcagcagagccctcacagtctcttg
cacatgggacaccccacccatcccgagccgcccagcatcaacatgatgtgccgggccgtc
aaagccctgctggccatggcccaggtggaggagaacagacctgagttcgtgctctacgag
agcaggcttcttgatatctcgctgtcctctgtgctgaactctggcgtggcagccatcctg
tgtgaggtactgtttaagctcggccgctcgtga
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integrated database retrieval system
