Sinocyclocheilus grahami (golden-line barbel): 107560222
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Entry
107560222 CDS
T04918
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B-like
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04010
MAPK signaling pathway
sgh04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107560222
04020 Calcium signaling pathway
107560222
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sgh04040
]
107560222
Ion channels [BR:
sgh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107560222
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
EGF_Hmr-1
Motif
Other DBs
NCBI-GeneID:
107560222
NCBI-ProteinID:
XP_016099824
LinkDB
All DBs
Position
Unknown
AA seq
1804 aa
AA seq
DB search
ILTVVGPDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMF
AIIGLDFYMGKFHRSCFKNDTGEQAADFPCGSELPARVCEGDTVCREYWTGPNFGITNFD
NILFAVLTVFQCITMEGWVDILYNANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGE
FAKERERVEKRQEFLKLRRQQQIERELTGYLEWICKAEEVMLAEEDKNAEEKEDGAWYKR
KCNNPVLKRAKKSKNDLINAEEGEDHFTDIPSVAPQGSPFTRTSVKSSKNESSSYFRRKE
KRFRFFIRRMVKAQSFYWTVLCIVGLNTLCVAIVHYDQPDWLTYALYLAEFVFLGLFLIE
MSLKMYGLGPRTYFHSSFNCFDFGVIVGSIFEVIWAAVKPGASFGISVLRALRLLRIFKV
TKFNFEDETPTTNFDTFPAAILTVFQILTGEDWNAVMYHGIESQGGVHRGMFCSVYFIVL
TLFGNYTLLNVFLAIAVDNLANAQELTKDEEEQEEAISKKLALQKAKEVKEVSPMSAANI
SITAFIRPNPGALSCSSSNSSSHSPSYVCSPAHHYLSKEQQRSLKMMSVWEQRTTQIRKH
ILASSEALYQEELNPRLTSNLHLRPDMKTHLDRPLVVEPHCDGPISPHRGWDKPQDLQGE
GGTPEERVPPVMEPPQSHLPRKHHPHREHPSNETNENSDTGHGKEGRHHIHHSRSKEHDG
TRCKEGKSDRSWSREGGRRHHHQSSVDEGVGGGEREHRHHHSHRHSREGNGVVNAGKSER
WSRQKDGSRSGTREGERCSRGENGGNGGRRRHRPRTSKAQSTLEGEEQRGNEEHEEGKSH
SHRHTDMGGDSLVVNPYQPSVGNRWCLEKPEDSDNKRNIGQTGGMGTHIPVTVTSPPGET
TLIPMNSIDSETMPMTEKNLEDLNQSSPRPILPFSSMFIFSPTNPGTKGKDISTIKSLRV
LRVLRPLKTIKRLPKLKRACIDFAINAKPLTRYMPQDQQSFQYRLWKFVVSPPFEYSIMI
MIALNTVVLMMKDRLLNLSFLRLFRAARLVKLLRQGYTIRILLWTFVQSFKALPYVCLLI
AMLFFIYAIIGMQVFGNIELNDDTAINRHNNFRTFLQALMLLFRSATGEAWHEIMLSCLS
ERTCDANSGIHGKECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPH
HLDEFIRVWAEYDPAACGRIKYLDMYEMLLHMSPPLGLGKKCPPRIAYKRLVKMNMPIAD
DNSVHFTSTLMALIRTALEIKLASGMVAQRLSDAELKKELATVWPNLSQKTMDLLVTPHK
PNELTVGKVYAALMIFDYYKQNRAKRLQMQQQQQKEQAGPGSQNKVSALLEPILPLTHMQ
DQAVNSVDSASEFQAQTRPSSTTLNNGRTHLDNTIKGSSSWASEKSKEVPRSKRRPMSRG
QSEDASNANTAQESVEMRKMENSANTVTSGSLEGQGRAVSMPKLNAEMQRSHSRHSPGTL
LETIPDSPMRRSASTFAPQRPQEVNLNDYTLAKPVQERHHHHHHHRCHHRRDRDKKQRSL
DRSPTGQHKATGTAADPVEERPHDRGRSHERKHHSSSVEKQRYYSCDRYSSREHCPSKSA
IASCATSPSEAQEASLNKQGSGWAKGSPVLLTSGASTPSRGRRQLPQTPLTPRPSVAYRT
ANSSPVQFLGTQAGLLPPSPGRLSRGLSEHNALLHSGSISSSPAPVSRINSEPFLGPYAI
FQEDPSPQTGRFAQTVGMPIVAIPPPPQQQFRGVPNGYHFITGPGASRGRARQYYPEAEM
DDWC
NT seq
5416 nt
NT seq
+upstream
nt +downstream
nt
gattctgaccgtagtggggccagactttgatttgcggacactcagggcagtaagagtctt
gcggccactcaagctggtgtctggaattccaagtctccaagtggttcttaagtccatcat
gaaagcaatggttcctctgcttcagatcggccttctgctcttttttgctatactcatgtt
tgccatcattggcctagacttctacatgggcaagtttcaccgctcctgcttcaaaaacga
tactggggaacaggcagctgactttccatgtggatcggaacttccagctcgggtgtgtga
aggtgacacagtttgtagggaatactggactggtccaaacttcggcataacaaactttga
caacatcctgttcgctgtgctcaccgtcttccagtgcatcactatggaaggatgggtgga
catcctttacaatgccaatgatgcctcagggaacacctggaactggctctacttcatccc
actcatcatcatcggctctttcttcatgctcaacttggttctgggggtgctgtcagggga
gtttgcaaaggagcgagagcgtgtggagaaaaggcaggagttcctgaagcttcgcagaca
acagcagatcgagagggagctgactggctacctggagtggatctgcaaagcagaggaagt
aatgcttgctgaagaagataaaaatgcagaggagaaggaggatggtgcctggtacaagag
gaaatgcaacaacccagtattgaagagagccaaaaagagcaaaaatgacctcatcaatgc
agaggaaggagaagaccacttcactgacatcccatcagtcgctccccagggctctccatt
cacccgtacaagcgtgaagagcagcaagaacgagagctcttcatactttcgcagaaaaga
gaagaggtttcgcttcttcatccgccgtatggtgaaggcccagagcttctactggactgt
tctgtgtatagtgggactgaacacactatgcgtggctatagttcactacgaccagcccga
ctggctcacatatgcattgtatttggcggagtttgtgttccttggtctgtttctaataga
gatgagtctgaagatgtatggccttgggcccaggacctactttcactcttcatttaactg
ctttgactttggggtgattgtaggtagcattttcgaggtgatttgggcagcagtaaaacc
aggagcctcttttggcattagtgtgttgcgagcgctgcgtttgctgaggatattcaaggt
taccaagtttaattttgaagatgagaccccgacgaccaactttgacacattcccagctgc
tatcctgacagtgtttcagattctgacaggagaggactggaatgctgtgatgtatcatgg
aattgaatcccagggaggagtgcaccggggaatgttctgctccgtgtacttcattgtgct
cacactgtttggaaactacactctcctcaatgtctttttggccatcgctgttgataatct
tgccaatgcacaggaactcaccaaggatgaggaggagcaggaggaagccatcagtaagaa
actggctctgcagaaagccaaggaggtaaaggaggtcagccccatgtcggccgctaacat
ttccatcacagcttttataaggccaaatcctggtgctctttcatgcagctcctccaactc
cagctctcattcaccgagttatgtctgctcccctgcacatcactacttgagtaaagaaca
gcagcgttctctaaagatgatgtccgtgtgggagcagcgcaccacgcagattcgtaagca
cattctggccagcagcgaggcgttgtaccaagaggagctcaacccccggctgacctccaa
ccttcacctccgccctgacatgaaaacccacctggaccggcctctggtggtggaacctca
ttgtgatggtcccatcagtccccacagaggctgggacaaaccccaggacttgcaagggga
gggcggcacaccagaggaacgagtcccccctgtgatggagccaccacagtcacacctacc
acgcaaacaccaccctcacagggagcatccctccaatgagaccaatgaaaacagcgacac
aggtcatggcaaagaaggccggcatcacatccatcacagccgcagtaaggagcacgatgg
aacacggtgtaaggaagggaagagtgacaggagctggagcagagaggggggccgcagaca
tcaccatcagagctcagttgacgagggagtaggaggtggggagagagaacatcgtcacca
tcactctcataggcatagcagagagggcaatggagtggtcaacgcagggaagagtgaacg
gtggtccaggcagaaggatggctcacgttcgggaacaagggagggggagaggtgctccag
gggcgaaaatggaggtaatggagggaggagacggcacagaccacgtaccagtaaagctca
gtcgacattggaaggagaagagcaacgagggaatgaagagcacgaggagggcaagtcaca
cagccacaggcacacggacatggggggagattcattggttgtaaacccctatcaaccttc
agttgggaaccgatggtgtcttgagaaaccagaagactcagacaataaacgaaatattgg
gcagactggaggaatgggcacacacatacctgtgactgtcacgtctccccctggagaaac
gacccttattcccatgaacagtatagacagtgagacaatgcccatgactgagaagaatct
ggaggatctgaaccagagcagccctcgtccaatcctccccttcagctccatgttcatctt
cagcccaaccaatccaggaaccaagggcaaagacatcagcactatcaagtccctgagggt
gttgcgagtcttgcgaccactgaagaccattaaacgtctaccaaaactgaagagagcgtg
catcgactttgctatcaatgccaaacctctgacccgctatatgccacaggaccagcagtc
ctttcagtaccgcttgtggaagtttgtggtctctccaccgtttgagtactccatcatgat
catgattgctctcaacactgtggtgctcatgatgaaggaccgtctgttgaacttgagctt
cctgaggctcttcagagcagccagactcgtcaaactcctccggcagggatacaccattcg
catcctgctctggacattcgtccaatcttttaaggcactgccttatgtttgccttctaat
cgccatgctgtttttcatctacgccatcattggaatgcaggtgtttgggaacattgagtt
gaacgatgataccgccatcaatcgtcacaacaactttcgcactttcctccaagcgcttat
gctgttattcaggagtgccactggtgaagcctggcatgagattatgctgtcctgtctgag
tgagcgcacctgtgacgcaaactcaggcattcatggaaaggagtgcgggagtgactttgc
ctacttctactttgtctccttcattttcctctgttctttcttgatgttgaacctgtttgt
ggctgtcattatggacaactttgaatatcttacacgtgactcctccatcttgggccctca
ccacctggatgagtttatccgagtgtgggcggagtatgacccagccgcatgtggccgtat
caagtacctcgatatgtatgagatgctgctccacatgtccccacctttaggtttgggaaa
gaaatgccctccacgaatcgcctacaagcggctggtgaaaatgaacatgcctattgcaga
tgacaacagtgtgcacttcacctccaccctgatggctctgatccgcacagccctggagat
caaactggcttcaggcatggtggcccaacgtctgtcagatgctgaactgaagaaggagct
cgctacagtctggccaaacctgtctcagaagactatggacctgctggtcactccgcacaa
acccaatgagcttacagtggggaaggtatatgcggctcttatgatttttgactattacaa
gcaaaacagagccaaaagacttcagatgcagcaacagcagcagaaagaacaggcaggacc
tggatctcagaataaagtcagtgctcttttagagcctattctcccactaacccacatgca
agatcaggctgtgaacagtgtagattcggcctcagagtttcaagctcagaccagaccaag
ctccacaacgctcaacaacggacgcacacatcttgataacacaataaagggatcttcatc
ctgggcctcagagaagtccaaggaggtcccacgatctaaacgacggccaatgtccagagg
tcaatcagaggatgcctcaaatgcaaatactgcccaggagtcagtagaaatgaggaagat
ggagaacagtgccaacacagtaacctctggcagccttgaaggccaaggacgtgcagtatc
catgccaaaactcaacgcagagatgcagaggagtcattcccgtcattctcctgggacttt
actggaaaccattcctgattcccccatgagacgctccgcatccacttttgcaccacagcg
ccctcaggaggtgaatctgaatgactacactttggcgaaacctgttcaagaacgacatca
ccatcaccatcatcaccgatgccatcatcgtagggacagagacaagaaacagagatctct
ggacaggtcgcccactggacaacacaaagctacaggcacagcagctgaccctgtagagga
gaggccgcatgaccgaggtcgttcccatgagaggaagcatcattcgtcttcagtggagaa
gcagcggtattactcatgtgatcgctacagcagtcgggaacactgtcccagcaagtctgc
cattgcaagctgtgccacctcacccagtgaggcccaggaggccagtctcaacaagcaggg
cagtgggtgggctaaggggagcccggtgttgttgacctcaggggcgagcactccaagccg
tgggcgcagacagctgccccagaccccccttactcctcgtccctccgtggcttacaggac
tgccaactcctcccctgtgcaatttctgggcacacaggccggcttgcttcccccaagtcc
cggcaggctgagccgcggtctgtccgagcacaacgccctcttacacagcggctccatctc
cagctcgccggcccccgtcagtcgcattaactcagaacccttcttggggccctacgccat
cttccaagaggatccgagccctcagacgggccgttttgcccagactgtagggatgccgat
cgtggcgattcccccacctccccaacagcagttccgcggggttcccaacggataccactt
catcacgggccccggggccagcagaggacgggcacggcagtactacccagaggcagagat
ggacgactggtgctag
DBGET
integrated database retrieval system
