KEGG   Sinocyclocheilus grahami (golden-line barbel): 107560349
Entry
107560349         CDS       T04918                                 
Symbol
wdr48
Name
(RefSeq) WD repeat-containing protein 48
  KO
K15361  WD repeat-containing protein 48
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    107560349 (wdr48)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sgh03400]
    107560349 (wdr48)
DNA repair and recombination proteins [BR:sgh03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     107560349 (wdr48)
SSDB
Motif
Pfam: DUF3337 WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 NBCH_WD40 WDR90_beta-prop_4th Beta-prop_DCAF12 ANAPC4_WD40 Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_NWD2_C Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_IP5PC_F WDR54 WD40_RFWD3 RAWUL WD40_like Nucleoporin_N
Other DBs
NCBI-GeneID: 107560349
NCBI-ProteinID: XP_016099984
LinkDB
Position
Unknown
AA seq 627 aa
MRVLQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKDPYIASME
HHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKTASSLSGNKDSIYSL
AMNQMGTVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGTI
RLWSLGQQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDRKIYCTDLRSPDIRVLICEEK
APVLKMELDRSADPHSAIWVSTTKSTVNKWSLKGIHNFRASGDYDNDCSAPLTPLCTQTE
QLIKGGASIIQCHILNDKRHILTKDTNNNVAYWDVLKACKVEDLGKMEVDEENKKRFKMV
YVPNWFSVDLKTGMLTITLDESDCFAAWVSAKDAGFTSPDGSDPKLNLGGLLLQALLEYW
PRTHTNPTDEETELNHGSVNGEHESRIQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDS
GGETESMLLNETVPQWVIDITVDYLTEKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASD
MLQVRKVMEHVYEKIINLDSESQTGGSAAEKPSEQKEEEEMAVLAEEKIELLCQDQVLDP
NMDLRTVKHFIWKSGGDLTLHYRQKST
NT seq 1884 nt   +upstreamnt  +downstreamnt
atgcgtgtgttgcaggtgtcatacgtgatcagagacgaggtggagaaatataatcgtaat
ggagtcaacgcacttcagctggatccggctctgaaccggctcttcaccgccgggagagac
tccatcatcaggatttggagcgttaaccagcacaaggatccatacattgcatcgatggag
catcacacagactgggtcaatgacatcgtcctctgctgcaacgggaaaacactgatatca
gcatcgtcagacaccacggtgaaggtctggaacgcacacaagggcttctgcatgtccaca
ctgcgaacgcacaagacagcgtcttctctcagtgggaacaaggactccatctacagtctg
gccatgaatcagatggggacggttatagtgtcaggatccactgaaaaggttctgagagtg
tgggacccgcgaacctgtgccaaactgatgaaactgaaaggacacacagataacgtcaaa
tcgctgctgctcaacagagacgggactcagtgtctctcagggagctcagacgggacgatc
cggctctggtctctgggtcagcagaggtgcatcgccacgtaccgcgttcacgacgagggc
gtctgggcgctgcaggtcaacgaggccttcacgcacgtgtactccggaggccgcgaccgg
aagatatactgcacagacctgcgcagtcctgacatccgtgtgctgatctgcgaggagaag
gctcctgtgctgaagatggagctggaccgctcggctgatccgcattcggccatctgggtt
tccaccacgaagtccacggttaataagtggtctctgaagggtatccataatttccgagcg
tctggtgattacgacaatgactgcagcgctccgctgacgccgctgtgcacgcagacagag
cagctgatcaaaggtggcgccagtataattcagtgccacattctgaacgacaaacgacac
attctgaccaaagacaccaacaataacgtggcgtactgggatgtgctgaaggcctgtaaa
gtcgaagacttgggcaagatggaggttgatgaagagaacaagaaaaggttcaagatggtt
tatgtgccgaactggttttcggtggatctgaagacagggatgttgacgataacgctggac
gagagcgactgctttgcagcctgggtttctgctaaagatgctggcttcaccagccctgac
ggatccgaccctaaactgaatctgggcgggctgctgctgcaggctctgctggagtactgg
cctcgcactcacaccaaccccacggacgaggagaccgaactcaatcatgggagcgtgaac
ggtgagcacgagagccggatacagaagggaaacggatatttccaggtgccgccgcacacg
ccggtgattttcggtgaagcgggaggaaggacgttattcaggctgctgtgtcgagactcc
ggtggagaaactgagtccatgttactcaacgagacggtcccgcagtgggtcatcgacatc
accgtggactatctcacagaaaaaaacatgcccaaattcaacaaaatcccgttctacctc
cagccccattcgtcctctggagcaaagacgttaaagaaggatcgtttgtcggccagtgac
atgttacaggtgaggaaggtgatggaacacgtgtatgaaaagatcatcaacctggacagc
gagtcgcagacaggcggttcggccgcagagaagcccagcgagcagaaagaggaggaggag
atggcagtgctagcggaggagaagattgagctgctctgccaagaccaggttctggatccc
aacatggacctgcgaacggtcaagcacttcatctggaagagcggcggcgacctgacgctc
cactaccggcagaaatccacgtga

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