KEGG   Sinocyclocheilus grahami (golden-line barbel): 107560775
Entry
107560775         CDS       T04918                                 
Name
(RefSeq) roquin-1-like isoform X1
  KO
K15690  RING finger and CCCH-type zinc finger domain-containing protein
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sgh03000]
    107560775
   04121 Ubiquitin system [BR:sgh04121]
    107560775
Transcription factors [BR:sgh03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    107560775
Ubiquitin system [BR:sgh04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    107560775
SSDB
Motif
Pfam: Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-RING_2 zf-C3HC4_4 zf-C3HC4_3 zf-C3HC4 zf-CCCH zf-C3HC4_2 zf-CCCH_4 zf-CCCH_UNK Prok-RING_4 zf_CCCH_4 FYVE NS3_helicase_C Baculo_IE-1 RING_XB3-XBAT31 zf-RING_6
Other DBs
NCBI-GeneID: 107560775
NCBI-ProteinID: XP_016100518
LinkDB
Position
Unknown
AA seq 1097 aa
MPVQAPQWTEFLLCPICTQTFEETVRRPISLGCGHTVCKMCLNKLHRKACPFDQTAINTD
IEQLPVNSALLQLVGGQVPKQQPVVFITCPEDTKHYDEARQCVEELALYLKPLSSARGLG
LSNAAQSMLSRPMQRKLVTLVHCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEGGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLAKGLVGVKTVVHGLVDFIQNHSKKGADTQQPPQHSKYKTYMCR
DMKQKGGCPRGASCTFAHSQEELEKYRKMNKRLAARVPCIPGLLPEEVVPLEPGRKASTL
TNGAPLPQLIPRGTDPSTYDLLLKPKMNATSLSAPGSPPDTLDKSSLALTSHPVPHPRAE
HLPMPKHVPVMPRGAPQMYPQQQPELFYSEPTRPPPSGSQYDAQYPTGNPYPYQPPPYVH
PRYIRNPPPPGESAVPPYPEPYPGYIPDRQYPSHHSGPPFSAHTYAPASHYSRRHGHYPV
PPPQFAPPRDDLVRMSPVPLDIPPAAMPPPPAGAAGSLYHPQEVSSRDRYPPEGYYPPGP
HPSQMRSHIGQDPYSRSQPSLDDLHRRRKELLVQLEERKVISPPPFAASPTLPTHPFPND
YPREYLEDGSKAFGSREPDYAGQYSPWSCDTIGSYIGSKDAKPKDVSSAVEMMNAEGKVL
REPPLDTQRRSAEAKDDDPIIPFGPLPTVSPFGAISRTSKTGYQTTVPVQAIASSQASGS
KHMTMTADYPYGNHSGWGGASYPQHQSINSQGHFSERLPVSASDREQLKIELQQVNQQIS
QQTRGMEACALASQPAAGVKWSSGGTVSSEQLSLELDHVELEIKKRTREITIENQVAHEY
KLNAAENGQTDHKAQLEELSLALGEVSNGSSGMKPASSMGGSMLSLTNKTSSLTLCSADQ
AASSSDLQKNGVVHSCS
NT seq 3294 nt   +upstreamnt  +downstreamnt
atgcctgtacaagctccacaatggacagagtttttactgtgccccatatgcacccagacg
ttcgaggaaactgtgcgtcggcccatcagtttgggttgtggccacaccgtttgcaagatg
tgcctcaacaagctgcaccgcaaagcttgtccgtttgaccagacggccatcaacactgac
atcgagcagctgcctgtcaactctgccctgctacagctggttgggggtcaggttcccaaa
cagcaacctgtggtgttcattacatgtcccgaggacaccaagcattatgatgaggcacgg
cagtgtgttgaggagctggccctctacctcaaacccctcagcagtgcacgaggattgggg
ttgagtaatgctgctcagagcatgctgagccgccccatgcagaggaagctggtgactctg
gtgcactgtcagctggtggaagaggaaggacgggtcagggccatgcgggcagcccgttct
ctgggtgaaagaactgttactgagctcattctgcagcaccaaaacccccagcagctctcc
tccaacctatgggctgctgtcagagccagaggctgccagttcctgggccctgccatgcag
gaggaggcactaaagctggtgctgttggctttggaagatggatccgctctttccaggaag
gttctggtcctctttgtggtccagagactggaaccaagatttcctcaggcctccaaaacc
agtattggacatgtagttcagctcctctaccgtgcctcctgcttcaaggtgactaagcga
gatgaggattcatcactaatgcagttgaaagaggaattccgcacgtatgaggcacttcgg
agggaacatgactctcagattgttcaaatcgcaatggagggagggctccgcatcgcgccc
gatcagtggtcttctctgctgtatggagaccagtctcataagtctcacatgcagtccatc
attgacaagctgcagaccccagcatcatttgctcagagcgtgcaggagctaaccatcgca
ctgcagaggacgggtgaccctgccaatctcaaccggctgagacctcacctcgagttactc
gctaacatcgaccccagtccagatgctcctcctccgacctgggagcagctggcgaagggg
ctggtgggggtaaagacggtggtgcatggcctagtggacttcatccagaaccacagcaaa
aagggtgccgacacgcagcagcctccacagcacagcaaatacaagacgtacatgtgcaga
gacatgaaacagaaaggaggctgtcccagaggagctagctgcaccttcgcccattctcag
gaggagctggaaaagtaccgtaaaatgaacaaacgtcttgctgcacgagtgccctgcatc
cctggcctgctgcctgaggaggtggtcccgctggagcctgggcgaaaggcctctacactt
accaatggggcccctcttccccagctcatccccagaggcacagacccctccacatatgac
ctcttactcaagcccaagatgaacgccactagcctgagcgctcctgggtctccacccgac
actttggataaatctagcttagccctgacatcccaccctgtgcctcaccccagggcagag
cacttacccatgcccaagcacgtgccagtcatgcccagaggtgcgccacagatgtatcca
caacagcagcccgagctcttctattcagagcccaccagacctcctccctcaggatctcag
tatgatgctcagtacccaacaggcaacccctacccataccaacctccaccgtatgtccat
ccccgctatatacgtaatccgcctcccccgggcgagtctgcagtgccaccttacccagag
ccctacccgggttacatcccagatcgccaatatccaagccaccactctggtccccctttc
tcagcccacacatatgcaccagcctcccattacagtcgcagacatggacactatcctgta
cccccacctcagtttgccccgcccagagacgacttggtcaggatgagcccagttcctctg
gacattccaccagccgctatgcctccacctccagcaggggctgcaggttctctgtaccac
ccccaggaagtgtcatccagagacagatacccaccggaggggtactatcctcctggaccg
caccccagccaaatgcggtcccacataggacaggacccgtatagccgctctcagcccagt
ctggatgacttgcatcgcaggcgcaaagagctgcttgttcagctagaggagagaaaagtc
atctctcctcccccctttgctgcctccccaactctccctacacacccgttccccaatgac
taccctcgggagtatttggaggacggctctaaagcctttggaagtcgggagccggactac
gctgggcagtattccccctggtcatgtgacaccataggatcatacattggctccaaggat
gctaaaccaaaagatgtcagtagtgctgtggagatgatgaatgcagaggggaaagttctc
cgtgaacctccactggacacccagcggcgctctgcagaagccaaagacgacgatcccatc
attccctttggtcctctgcctacagtgtctccttttggtgccatttcacgtacctctaaa
acgggttaccagaccactgtgcctgtacaggccatagcatcctcacaggcctcgggctcc
aaacacatgaccatgacagcagactatccatatggaaaccacagtggatggggaggagcg
tcgtaccctcagcaccagagcattaactctcagggacacttcagcgagcgtctgccagtg
tctgcctctgaccgcgagcagctcaagattgagctccagcaagtcaaccaacagatcagt
cagcagacacgcggcatggaggcgtgtgcgctggcatctcagcctgcggctggagtgaag
tggtcttcaggtggcactgtgtctagtgagcagctcagcctggagcttgatcacgtagag
ctggagatcaaaaagagaacccgtgaaatcaccattgagaaccaggtggcccatgaatac
aagctgaatgccgctgagaatgggcagactgaccataaagcccagctggaggagctctct
ttagcattgggtgaggtgtctaatggatccagtggcatgaagccagccagtagtatgggt
ggatctatgctctcgctgaccaataagacgtcttctctcaccctctgctccgctgaccaa
gcagcgagtagctcagaccttcaaaagaatggtgttgttcactcttgctcttaa

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