Sinocyclocheilus grahami (golden-line barbel): 107560827
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Entry
107560827 CDS
T04918
Name
(RefSeq) PDZ and LIM domain protein 5-like
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107560827
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sgh04990
]
107560827
Domain-containing proteins not elsewhere classified [BR:
sgh04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
107560827
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
LIM_FHL2-3_N
PDZ_2
DUF3854
Motif
Other DBs
NCBI-GeneID:
107560827
NCBI-ProteinID:
XP_016100581
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
MNNYSVSLIGPSPWGFRLQGGKDFSMPLTISRLTEGGKAAKAKISVGDVVLSIDGIATEG
MTHLEAQNKIKACMGNLNLSVLRSSSITKTETLQEDPQEIIKPVPISQTPGASIGPASIA
YNKTARPFGGTTNTVRSVSPKASIPSASSAFTPAAPSQQPGSAPKPASGHSPFTNSSSTP
SSGSSSPARVLAPPPAPAAPHSSVYNTPINLYSNENVCEVALGQRRGLLESKATGEQHNG
TARKPVLEPEGNHVSALSDASKKRVIEDTEDWHPRTGTSQSRSFRILAQITGTENEQAQE
NQPGKNEATEELQPSSNATSSVKTMSNAAAGAPRQGNGVPPAAAKSWQSSSAAGFPKAGA
PAPQTGPSIGRVSSKGPDRPAPQVHPNDQDDSLVQRAEHIPAGTRTPMCGHCNMVIRSGI
CITTHYMCHLTHIHPHSLRFNNLTISLAVVETRSSSFDAPQQEEVITGQTEVINALKQTW
HVYCFLCTACQQPIRNNTFHLEDGQPYCETDYYTLFGTSCHGCDFPIEAGDKFLEVLGFT
WHDTCFVCTVCSTSLEGQTFFSKKDKPLCKKHAHTVQF
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgaataactacagcgtgtccttgattggaccttcaccctggggcttcagactgcagggt
ggcaaggacttcagcatgcctctcaccatctccagactgacagaaggaggaaaggcagcg
aaagccaagatcagcgtcggggacgttgtgctgtcgatcgatggcattgccacagaggga
atgacacacctggaagcccagaataaaatcaaagcctgtatgggaaacctgaacctctca
gtgctgagatcttccagtatcactaaaacagagactttgcaggaggatccacaggagatc
ataaagccggtgcccatcagccaaacgcccggggcctccattggccccgccagcattgct
tataataagacagctcggcccttcggcggaacgactaacaccgtcagatcggtcagtccc
aaagcctccatcccctccgcctcgtctgccttcaccccagccgctccatcccagcagcct
ggctccgcccccaaacccgcctctggccactcccccttcactaactcctcctccacaccc
tcctctggctcctcctccccagcgagagtgctggctccgcccccggcccccgccgcccct
cattcgtccgtctataacacgcccatcaacctctactccaatgagaacgtgtgcgaggtg
gccttgggccagaggcgtggcctgctggagagcaaagccacaggggaacagcacaacgga
accgctcgtaagcccgtgctggagccggaggggaatcacgtctcagctctcagtgatgcc
agtaagaagcgtgtgatcgaggacacggaggactggcatccacgcaccggcacgtctcag
tcgcgctccttccgcatcctggcacagatcactggcacagagaacgagcaagctcaggag
aaccagccggggaagaacgaggccacagaggagcttcagcccagttctaatgccacgtct
tcagtcaaaaccatgagcaacgcggccgctggagccccgaggcagggcaacggagtccct
ccagccgcagccaagagctggcagtcgagcagtgccgcagggtttcccaaagcaggtgca
cctgcgccgcagacgggcccctcgatcggacgggtcagcagcaagggcccggatcggccc
gcgcctcaggttcaccccaacgaccaggacgattcgctggtgcagagagccgaacacatc
ccggcaggaacacgcacacccatgtgcggccactgcaacatggtcatcaggtcaggcatc
tgcatcaccacacattacatgtgccatttaacccacattcacccacattcgctaagattc
aacaatttgacgatatctctggctgtggtcgagacaagatcatcatctttcgacgcaccg
cagcaagaggaggttatcacggggcagacggaagtcatcaacgctctgaagcaaacctgg
catgtgtactgcttcctgtgcaccgcctgccagcagcccatccgcaacaacaccttccac
ctggaggacggacagccgtactgcgagaccgattactacaccctgttcggcaccagctgt
cacggatgcgacttccccatcgaagcgggcgataagttcctggaggtgctggggttcacc
tggcacgacacctgcttcgtctgtacggtgtgcagcacgagtctggagggtcagaccttc
ttctccaagaaagacaagcccttgtgcaagaagcacgctcacaccgtccagttctga
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