Sinocyclocheilus grahami (golden-line barbel): 107561340
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Entry
107561340 CDS
T04918
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I-like
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04010
MAPK signaling pathway
sgh04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107561340
04020 Calcium signaling pathway
107561340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sgh04040
]
107561340
Ion channels [BR:
sgh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107561340
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
ETRAMP
Motif
Other DBs
NCBI-GeneID:
107561340
NCBI-ProteinID:
XP_016101252
LinkDB
All DBs
Position
Unknown
AA seq
2070 aa
AA seq
DB search
MKGKHSIMVILLNCVTLGMYQPCENIDCTSERCQILQAFDAFIYIFFALEMVVKMVALGI
FGHRCYLGDTWNRLDFFIVMAGIVEYSLDLQNINFSAIRTVRVLRPLKAINRVPSMRILV
NLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWAGLLRNRCYPEENFTLTSGITLPTPYYQ
PEEDDERPFICSLAQDNGIMSCSDVPARREGGRECCLDKEDALHRQTLGLSAEPLVNGSA
STVGLCVNWNQYYTRCHTGHTNPHKGAINFDNIGYAWIVIFQVITLEGWVEIMYYVMDAH
SFYNFIYFIFLIIIGSFFMINLCLVVIATQFSETKQREHQLMQEQRARYLSSSTLASLAE
PGDCYEELFQLVCHILRKARRRSAALYYMLRGKAPPPGGGRWRGKGGAGSTGGGANVNGS
ERHHCHSTQIPHCIHDTKLDQSSQSLENAISLSVTPKTEECLQCAAAPSLKEGLRLMGHS
ANGEEEEVALEENDRDENRLDEKGDNDSEDMPKRKRTCLGKCKDIWDKMSARLWGIVESK
YFNRGIMIAILINTISMGIEHHNQAIVVCEIIGQSDGGLSVLRTFRLLRVIKLVRFMPAL
RRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHIFGCKFSLKTEAGDTVPDRKNFDSLL
WAIVTVFQILTQEDWNMVLYNGMASTSPLAALYFVALMTFGNYVLFNLLVAILVEGFQAE
GDANRSCSDDDRSSCNLEETEKKDSLQLSDPKISTLTPNGHLDLAPAPNARGLYPSERLS
FALSSRKSSMSSLSRASLEQTTLCPGRASMYHNWGQPARPGIWSRRSSWNSLSRSSRCLG
MGGGGSLRVCSPHSRPVEQESLLSPPPPPLHPPLLSRHFIPRRERRALSLELPELLQVPG
PALPPLEARQCKKSFSGGLGSVGEHQDCNGKTPSVQPQIINEVYPQVNARKDREDLDDEL
DYSLCFRMQKMIEVYRPDWCETREDWSVFLFSPQNKFRMLCQSIIAHKLFDYVVLAFIFS
NCITVALERPKILQGSLERLFLTVSNYIFTAIFVGEMTLKVVSMGLYIGEQAYLRSSWNV
LDGFLVFVSLIDIVVSMAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLITSLK
PIGNIVLICCAFFIIFGILGVQLFKGKFYYCLGLDVKNITNKSDCLLANYKWVHHKYNFD
NLGQALMSLFVLASKDGWVNIMYHGLDAVAVDQQPITNNNPWMLLYFISFLLIVSFFVLN
MFVGVVVENFHKCRQHQEVEEAKRREEKRLRRMEKKRRKAQKLPYYASYSHVRLMIHTLC
TSHYLDIFITFIICVNVVTMSLEHYSQPRSLEITLKYCNYFFTSTFVLEAVLKLIAFGFR
RFFKDRWNQLDLAIVLLSVMGIILEEIEISASLPINPTIIRIMRVLRIARVLKLLKMATG
MRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGELVCNEDYPCEGMSRHATFENF
GMAFLTLFQVSTGDNWNGIMKDTLRECPPGEYTCNPSLQFISPMYFVSFVLTAQFVLINV
VVAVLMKHLDDSNKEAQEEAEMDAEIELELAQGTLCCIGGGGSGAERSSGGHQGAGPCST
LPPHSPNTHPGAHEPNSTRKLYSPAQENLWLDSVSLLIKDSFEGEMLMIDNLSGSVFHHY
SSPPICKDCRTHPQEQIHMAELEQASLRSEQLSDKSSSPALPDDLSLDEQSVYQMSAKEG
KERGCDECLNTEEPGGRGHSRLRRPSRVHSSGTEEGVAVNGASSQSPHHNTPARHSIGGV
PSSNQEYPGVSGASSRSTTPIHLIAEFFHPAAAALPAPPRGRPGHKPRGLRLTSPASWAS
LRSPGANTRLLTTQYSSHSDSSLATGSSESSLPTTMEEGLSFTTQPLLDTLLDDRSSLST
KTLRPSPPAAQNLQTMRGHQRSKSSCERDINAGRTRQDSDEDVGMVRCGSNQTCDSQQLS
ETPSSLSLTSLLLPSSLAPPFVKKCNSTGSLDQGILTTQENVFIKEPQGKITSPWKERKE
GRRESQSEAAQGKDGESTSQITIVGSRRNR
NT seq
6213 nt
NT seq
+upstream
nt +downstream
nt
atgaaggggaaacatagtatcatggtgatcctgctgaactgcgtcactctggggatgtac
cagccctgcgagaacatcgactgcacctcagagcgctgtcagattctacaggcattcgat
gcatttatctatattttctttgcactggagatggtggtgaagatggtggctctggggatc
tttggccatcgctgttatcttggcgatacttggaacagactggactttttcattgtcatg
gcagggattgttgaatactcccttgatctccagaacatcaatttctccgccatcagaaca
gtgcgtgtactcagacctctcaaagccatcaacagagtacccagtatgcgtatcctggtg
aacctactgctggacactctgcccatgctgggaaatgtgcttctgctctgtttctttgtc
ttcttcatttttggcataattggcgtgcagctatgggctggactattaagaaatcgctgt
tacccagaggagaacttcaccctcacatctggcatcaccctccccaccccatattatcag
cctgaggaggatgacgagcggcccttcatctgctctctggctcaggataacggcatcatg
tcctgcagcgacgtccctgctcggagagaaggtggacgggagtgctgtctagataaagag
gatgcactgcaccgtcagaccctgggcctgagcgcggagccactggtcaatggcagtgcc
tccaccgtggggctctgtgtgaactggaaccagtactacacccgctgtcacacaggacac
accaacccacacaaaggagcgatcaactttgacaacataggttacgcatggatcgtcata
tttcaggtgatcacgctggagggttgggtggagatcatgtactacgtcatggatgctcat
tccttctacaacttcatctacttcatattcctcattatcattggatctttcttcatgatt
aatctgtgcctggtggtcattgccactcagttttcggagaccaaacagcgagagcaccag
ctgatgcaagagcaacgtgctcgctacctgtcctccagcacgctggcttcgctcgctgag
cccggagactgttacgaggagctcttccagctggtctgccacatcctgcgcaaggcccgc
cgccgctcagccgccctttactacatgctccgtggcaaagcccctccccctgggggaggg
aggtggcgtggcaaaggaggggcaggatcgacagggggaggggctaatgtgaatggcagc
gaaagacaccactgccattctactcagatccctcattgtattcatgataccaagttggac
cagagctcccaatctctggagaacgccatctccctctccgtcaccccaaaaacagaggag
tgtctacagtgtgctgcagccccgtcactcaaggaggggctgagactgatggggcactcg
gccaatggggaggaagaggaggttgcgctggaggagaacgacagagatgagaaccgattg
gatgagaagggggacaatgactctgaggacatgccgaagaggaaacgcacctgtttaggg
aaatgtaaagatatttgggataaaatgagcgcgaggctttggggtatagttgaaagcaag
tacttcaacagagggattatgatcgccatcctcatcaatacgatcagcatgggcattgag
caccataaccaggctattgttgtatgtgagatcattgggcagtctgacgggggtctgtcc
gtcctgaggacgttcagactgttgagggtcataaagctggtgcggttcatgccagctctg
cgcagacaactggtggtcctgatgaagaccatggacaatgtggccaccttctgtatgtta
ctaatgctctttatcttcatattcagtattctgggaatgcacatatttggctgcaagttc
agcctgaagacagaggctggggacacagtacctgacaggaaaaactttgactccctgctt
tgggccattgtcacagtgtttcagattctaactcaagaggactggaacatggttttgtat
aacggcatggcctctacctcccccctggcggccctgtattttgtcgcgctcatgactttt
gggaactacgttctgttcaatctgcttgtggctatcttagtcgaaggatttcaggctgag
ggtgatgctaaccgttcctgctctgatgacgacagatcctcttgtaacttagaagaaact
gagaaaaaggactcactccagctgtccgatcccaagatttccactttgacccctaatggg
catctggatttggcacctgcacccaatgccaggggcctgtacccatctgaaaggctgagc
tttgccctgagttcccgtaagagcagcatgagctctttgagcagggctagcctggagcag
acgacgctgtgtccagggcgagcctctatgtaccacaactggggacagcctgcacgacca
ggaatatggagtcgcaggtcaagctggaacagcttaagtcgatcttctagatgcctggga
atggggggcggaggcagtttaagggtctgtagccctcactctcgtcctgttgagcaggag
tccctgctgtctcctccgccccctcctctgcacccgcctctgctctctagacacttcatc
ccgcgcagagaacggcgggctctctctttggagcttcctgagctgctgcaggtgcctgga
ccggccctgcctcctctggaggcacggcaatgcaagaagagcttctctgggggtctggga
agtgttggagagcaccaggactgtaatgggaagacaccatcagtccaaccacaaatcatc
aatgaagtctaccctcaggtcaatgcacgcaaggacagggaggatctggacgatgagctg
gactatagtctatgtttccggatgcagaagatgatagaggtgtacagaccagactggtgt
gagaccagggaagactggtccgtcttcctcttctctccccaaaacaagttcaggatgttg
tgccagtccattatagcccataagttgtttgactatgtggtgctggccttcatcttctca
aactgcatcactgtggctctggagagacccaagatccttcagggtagcctggagaggctt
ttcctcaccgtgtccaattacattttcacagccatatttgtgggggagatgacactcaag
gtggtgtctatgggtttgtatattggagagcaggcgtacttgcgcagcagttggaacgtt
ttggatggtttcctggtgtttgtgtctttgattgacattgttgtgtcaatggcgggcggg
gctaagatactgggtgtgctcagggttcttaggcttctgcgcacactgcgccccctcagg
gttatcagtcgagctcctggcctcaaactggttgtggagactttgatcacctctctaaag
cctataggaaacattgttctcatctgctgtgcctttttcatcatctttggcatcctggga
gtccagcttttcaaaggcaagttctactactgcttgggcctggatgtcaaaaacatcacc
aacaagtctgactgcctcttggccaattataagtgggtccatcacaagtacaactttgac
aacttggggcaggccctgatgtccctgtttgtgctggcatcgaaggacggctgggtcaac
attatgtatcatggtctggacgcagtggcagtggaccagcagcccataaccaataacaac
ccctggatgctgctgtacttcatctccttcctcctgatcgtcagtttcttcgtgctgaac
atgtttgttggagtggtggtggagaacttccacaagtgccgacagcaccaggaggtggag
gaggccaagaggagggaggagaagagactgagacgcatggagaaaaagagacggaaggcc
cagaagttgccctactatgccagttacagtcatgtgcgattgatgatccacaccctgtgc
accagtcactacctggacatcttcatcaccttcatcatctgtgtaaacgttgtgactatg
tcactggagcactacagccagcctcgttctctggagatcacactcaagtactgtaattat
ttcttcaccagcacctttgtgctggaggctgtcctgaagctcatcgcgtttggcttccga
cgtttcttcaaagacaggtggaaccagctggatttggctatagtgctgctgtcagtcatg
ggcatcatattggaggagattgagatcagtgcatctctgcccatcaaccccaccatcata
cgtatcatgagggtcctacgcattgcacgtgtgctaaagctgttaaagatggccacggga
atgagagcgctgctggatacggtagttcaagccctgccacaggtggggaatcttggcctc
ctcttcatgctgctgttcttcatttatgctgcactgggggtggaattgtttggagagctg
gtgtgcaacgaggactacccatgtgagggcatgagtcggcacgccacctttgagaacttc
ggcatggcgttcctcaccctcttccaggtctccactggtgacaactggaacggcataatg
aaggacactcttcgagaatgcccgccgggcgaatacacctgtaatcccagcctacaattc
atctctccgatgtactttgtgagctttgtgctcacggcccagtttgttctcatcaatgtg
gtcgtggcagtgctgatgaaacacctagatgactccaacaaagaagcccaggaggaggca
gagatggatgcggagattgaactggagctggcccagggaacgctctgctgcatcggagga
ggcgggtctggagcagagaggagcagtggggggcatcaaggggctggaccctgctctact
cttccacctcactccccgaacacacacccaggtgcccacgagcccaacagcaccaggaaa
ctctactcaccagcccaggagaacttgtggctggacagtgtatcgctgcttatcaaagat
tcatttgaaggggagatgctgatgattgacaacctctctggctccgtcttccatcattac
tcctccccacccatctgcaaggactgcaggactcatccgcaagagcagatccacatggct
gaactggagcaggcatctctgaggtcggagcagctctcagataagtcatcctcaccagcg
ctgcctgatgacctcagcctggacgagcagagcgtgtaccagatgtctgccaaagagggc
aaggaaaggggctgtgatgagtgcctaaacactgaagaacctggagggagaggtcacagc
aggttacggcgaccctctcgggttcacagctctgggacagaagagggggtggcagtgaat
ggagccagttctcaaagtccacatcacaacacacctgctcgtcacagcataggtggagtt
cccagcagtaatcaggaatacccaggggtttctggagcctcaagccgttctaccactccc
atccatctcattgctgaattcttccacccagctgctgcggccctcccggcacccccgaga
ggccgaccgggacacaaaccaagagggctccggctaacttccccagcctcatgggcatct
ctacgctctcctggagcaaacaccaggctgctcaccacacagtattcatctcacagtgac
tcctccctggctacgggcagctcagagagcagcctaccaaccaccatggaagaagggctc
agtttcaccacccagccactgctggacacactccttgacgatcgctccagcctctccaca
aagaccctgagacccagccctccagccgcccagaacctccaaactatgagggggcaccag
cgcagcaagagcagttgtgaaagggacattaatgcaggaagaactcggcaagactccgat
gaggatgtagggatggtacggtgcggttctaaccagacttgcgacagccaacagctctcc
gagacaccgagcagcctgtcgctcacatcgctgcttctgccgagctctctagcgcccccg
tttgtgaaaaagtgcaacagcacaggtagcttagaccaggggattctcacaacccaagaa
aatgtgttcataaaagagccacagggtaaaatcaccagcccctggaaagaaaggaaagaa
ggaagaagagagagtcagtcggaggcagcacaaggaaaagacggggaaagtacaagccaa
ataacaattgtgggctctagaagaaatagatga
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integrated database retrieval system
