KEGG   Sinocyclocheilus grahami (golden-line barbel): 107562083
Entry
107562083         CDS       T04918                                 
Name
(RefSeq) histone-binding protein RBBP7
  KO
K10752  histone-binding protein RBBP4
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03082  ATP-dependent chromatin remodeling
sgh03083  Polycomb repressive complex
sgh04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    107562083
   03083 Polycomb repressive complex
    107562083
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    107562083
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sgh03036]
    107562083
Chromosome and associated proteins [BR:sgh03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     107562083
  Histone modification proteins
   HAT complexes
    HATB complex
     107562083
   HDAC complexes
    Sin3A-HDAC complex
     107562083
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     107562083
    PRC2.2
     107562083
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     107562083
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    107562083
  Chromatin remodeling factors
   NuRD complex
    107562083
   NuRF complex
    107562083
   NuRF complex (fruit fly)
    107562083
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 CAF1C_H4-bd Beta-prop_TEP1_2nd WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF12 WD40_RFWD3 Beta-prop_WDR19_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st eIF2A Beta-prop_RIG_1st Beta-prop_SPT8 MIOS_WD40 Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 107562083
NCBI-ProteinID: XP_016102132
UniProt: A0A672PVJ9
LinkDB
Position
Unknown
AA seq 426 aa
MADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDY
VVHRLVLGTHTSDEQNHLVIASVQIPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECDPDLRLRGHQKEG
YGLSWNSNLSGNLLSASDDHTICLWDISAVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILASGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE
DGPPELLFIHGGHTAKISDFTWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDTPASE
LEGQAS
NT seq 1281 nt   +upstreamnt  +downstreamnt
atggcagacaaagaagtgtacgacgatgcagtggaggagagagtaataaatgaggaatac
aagatctggaagaaaaacacaccattcctgtatgatctagtcatgacccatgcactcgag
tggccgagtttgacggtgcagtggcttcctgatgtgaacaggcctgagggaaaggactac
gtggttcatcggctggtgttgggcacacacacttcggatgagcagaaccacttggttatc
gccagtgttcagatccctaatgatgatgctcagtttgacgcgtcccactacgacagtgag
aaaggagcagagtttggagggtttgggtcggtgagcggaaagatcgagattgaaattaag
atcaaccatgaaggagaagtgaacagagccagatacatgcctcaaaacccctgcatcatc
gccaccaagacccccacttctgacgtgctggtgtttgactacaccaaacacccgtccaag
ccagaccccagtggagagtgtgatccagacctgagactgcgggggcatcagaaggaggga
tacggtttgtcctggaactccaacctgagtggaaacttgcttagtgcatcggacgaccat
acgatctgtctatgggacatcagtgctgttccaaaggaggggaagatagtagatgccaag
accatcttcacagggcacacagctgtggtggaggacgtgtcctggcaccttctacatgaa
tcgctgttcggctctgtggctgatgaccagaaactcatgatctgggacacacgatccaat
aacacctcaaagcctagtcattctgtggatgcccacacggctgaagtcaactgcctgtcc
ttcaacccctacagcgagttcattctggcctctggttcagcagacaagactgttgcattg
tgggatctgcgtaacctgaagctgaagcttcactcttttgagtcacacaaggatgaaatc
ttccaggtccagtggtctccccataacgagaccatcctggcttccagtggcacagacaga
cgcctcaatgtttgggatctaagtaaaatcggagaagagcagtctgcggaggacgcagaa
gacgggccacccgagctgctgttcattcatggtgggcacacagctaagatctctgacttc
acctggaacccaaatgaaccttgggtaatctgttctgtgtcagaggacaacattatgcaa
gtatggcagatggctgagaacatctacaatgatgaagagccagacacccctgcgtcagag
ctggaggggcaggcgtcgtaa

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