KEGG   Sinocyclocheilus grahami (golden-line barbel): 107562287
Entry
107562287         CDS       T04918                                 
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat-containing protein 61-like
  KO
K12602  WD repeat-containing protein 61
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107562287
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sgh03019]
    107562287
Messenger RNA biogenesis [BR:sgh03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     107562287
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_EML_2 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_Gbeta WDR55 Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_ACSF4 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 eIF2A WD40_RFWD3 Beta-prop_VPS8 Tricorn_2nd Beta-prop_SPT8 Beta-prop_NWD2_C Beta-prop_DCAF4 Beta-prop_WDR41 Beta-prop_Nup120_160 Beta-prop_IFT140_1st NBCH_WD40 PROPPIN Ge1_WD40 Beta-prop_HPS5 Beta-prop_NUP159_NUP214 Cytochrom_D1 Beta-prop_WDR75_2nd WD40_like Beta-prop_LRRK2 WDR54 VPS8_N Beta-prop_DCAF12 DUF2415 Beta-prop_IFT122_2nd Nucleoporin_N Beta-prop_pof12
Other DBs
NCBI-GeneID: 107562287
NCBI-ProteinID: XP_016102396
LinkDB
Position
Unknown
AA seq 305 aa
MSTQYSILFKQEHAHEDAIWTAAWGRSEKDGSETIVTGSLDDLVKVWKWSDEKLELQWTL
EGHQLGVVSVDISQNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFSPDSKY
IATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG
KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAF
SPDNTHFVSSSSDKSVKVWDTSSRSCVNTFFDHQDQVWSVKYNPTGSKIVSAGDDRAIHI
YDCPM
NT seq 918 nt   +upstreamnt  +downstreamnt
atgagcacacaatacagtattctattcaagcaggagcatgctcacgaagatgccatctgg
accgcggcatggggtcgcagcgagaaggacgggtcagaaaccatcgtgaccggctctttg
gacgacctggtaaaagtgtggaaatggtcggatgaaaagctggagctgcagtggacgctg
gagggtcaccagctgggtgtggtgtcggtggacatcagtcaaaatggagcgattgccgcc
tccagctctcttgatgctcatattcggctctgggatctggagacgggcaaacagattaag
tccatggacgcaggcccagttgacgcctggacggttgccttttctcctgactccaaatac
attgccactggcagccatctagggaaggtcaacatcttcggcgtggaaagtgggaaaaag
gagcactcgctggacaccagagggaaattcattctgagcatcgcttacagtccagatgga
aagtacttagccagtggtgctatagacggaatcattaatatctttgatattgcgactggg
aaactcctgcacacgctggaaggtcatgcgatgcctatcaggtctctgactttctctcca
gactctcagctgctggtaaccgcatcagatgatggctacatcaagatttatgacgtgcag
cacgctaacctggccggcactctcagcggtcacggatcctgggtactgagcgtggccttt
tcacctgacaacacacacttcgtgtccagttcgtctgataagagtgtaaaagtgtgggac
acaagcagcaggtcatgtgtgaacacattctttgatcatcaggaccaggtttggagtgtg
aagtacaacccgacaggctccaaaatcgtctctgcaggtgatgacagagccatccacatt
tacgactgtcccatgtga

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