Sinocyclocheilus grahami (golden-line barbel): 107562550
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Entry
107562550 CDS
T04918
Name
(RefSeq) integrin alpha-1-like
KO
K06480
integrin alpha 1
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04510
Focal adhesion
sgh04512
ECM-receptor interaction
sgh04810
Regulation of actin cytoskeleton
sgh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107562550
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107562550
09142 Cell motility
04820 Cytoskeleton in muscle cells
107562550
04810 Regulation of actin cytoskeleton
107562550
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sgh04147
]
107562550
04515 Cell adhesion molecules [BR:
sgh04515
]
107562550
04090 CD molecules [BR:
sgh04090
]
107562550
Exosome [BR:
sgh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107562550
Cell adhesion molecules [BR:
sgh04515
]
Integrins
Integrin alpha subunits
107562550
CD molecules [BR:
sgh04090
]
Proteins
107562550
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Integrin_A_Ig_2
FG-GAP
VWA_2
FG-GAP_3
Integrin_A_Ig_1
VWA_CoxE
DUF11
Motif
Other DBs
NCBI-GeneID:
107562550
NCBI-ProteinID:
XP_016102672
LinkDB
All DBs
Position
Unknown
AA seq
1014 aa
AA seq
DB search
MLSGVVHFTLAALLALLPWLSCFNVDEKNQMSFSGPVEDMFGYTVQQFENSEGKWVLIGS
PLTGQPAKRTGDVYRCPVGQNKNTGCEKFLLPENTTIPNINEVKENMTMGTTLVVNPDGS
GFLACGPQYGYMCGKQQYITGICSNVSSSFKVLNSIAPTVRECKQDMDIVIVLDGSNSIY
PWSPITEFLVKFLQSIEIGPARVGIVSYGDDVGHVFNLSQFSNTKDLLKEAADIPQRTGH
KTMTALGIDTARKEAFTVERGARPGVKKVMVIVTDGESHDHYNLKNVTDQCERDGIERFA
VAVLGDYNRQNKTNEEIKKFIDEIEFIASDLKSDHFFNVSDEAALVTIVDALGSKIFALE
ATSEKHTSSFEMEMSQSGFSAHTSKAGVMLGAVGAFDWNGTVVMQSGQEFVVPKKNTFHD
PAEQRYEGMAGYIGYDVQSAHTPHGVLYITGAPRFNHSGRVTVYRFDGENVTITQTLKGE
QIGSYFGSVLQTHDIDRDNYTDILLVGAPMYMGPERDEQGQVYVYRLNEDGLFEHEMTLK
PVNQTCCTAHSQSNCKSISKNEPCGARFGTAIAAVPDLNLDGFSDIVIGSPLENDHRGAV
YIYHGSQKSIKEKYVQRIAAGGDGESMKFFGQSIHGIMDLNDDGIIDVTIGGIGGAALFW
SRDVAELLAEMTFDPSKINLQQTCQVQGRTTVCVKTKVCFKYRIKSDKDTNTGTVIRYSL
TLDSLRAIARGRFNETDNRRLQKNESIVDRLCREHTFYTSASNQSSYTQEGKLLSRDFYQ
RFSDQRPEARKISPASIETLQHVLLHCILALGDPEEIALVDCGNDDKCVANLHLKATANI
SRLLIKSNQEKFYVNIDIHNSRDNAYNTKVTLSHTENINYVKVEPKDKDCETNPTRIVCA
VGYPFLKTDKKESFKIQFEPNPFHIRKDIVINVTATTDSEESDSNLRDNFVSIVIPVQHE
ANLRFSANKYMKQDHIIFKEKETIPSVFNHTSVIGDEVKISYTSGVPADDVDVA
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgctttctggagtcgttcatttcacactagcagcgcttttggctctgctgccatggttg
tcatgtttcaatgtagacgagaagaaccagatgtcattcagtggaccagtggaggacatg
ttcgggtacaccgtccaacaatttgagaacagtgagggaaagtgggttctgattggttct
cctctgactggacagccagctaaacggaccggagacgtctacaggtgccccgttggacaa
aacaaaaacactggatgtgaaaaattccttttgccagaaaacacaacaattccgaacata
aatgaagtgaaggaaaacatgactatggggacgacgctggtggttaacccagacggcagt
ggctttctggcctgtggtcctcagtatggctacatgtgtggaaaacagcagtacatcact
gggatctgctcgaacgtcagctcctccttcaaagtcctcaactccatcgctccgactgta
cgagagtgcaagcaggatatggacattgtcatagtgttggacggttccaacagcatctac
ccatggagtcccatcaccgagtttctggtcaaatttctccagagcattgaaatcggacca
gcccgggtgggcatcgtgtcttacggagacgatgtcggccacgtcttcaatctcagccag
ttcagtaacacaaaagaccttcttaaggaagctgctgatatacctcaaagaaccggccac
aaaaccatgacagctctcggcattgatacagcaaggaaagaggcctttacagtggagcga
ggagcaagaccaggagtcaaaaaagtcatggtgatcgtcacagatggcgagtcacatgac
cactacaatttgaaaaatgtcaccgatcagtgtgaacgagatgggattgagcggttcgct
gttgctgtccttggtgactataatcgacaaaataaaaccaatgaagaaataaagaagttt
attgacgaaatcgaatttattgctagcgatctcaaaagcgatcatttcttcaatgtgtcg
gatgaagcagcattagtgaccatcgtggatgccttaggaagcaagatctttgccttagag
gccacatctgagaaacacacctcctcatttgagatggaaatgtctcagtcgggattcagc
gctcacacgtctaaagcgggtgtgatgctgggagccgtgggcgctttcgattggaacggc
actgtagtgatgcaatctgggcaagagtttgtcgttcccaaaaaaaacaccttccacgac
cctgcagagcagagatacgaaggcatggcgggatacataggttatgatgtgcagtcggcg
cacacaccccatggggtgctgtacatcacaggtgcaccacgctttaaccacagcggccgg
gtcacggtgtaccgcttcgacggagaaaatgtcaccataacacagacgctgaaaggagag
cagattggctcctatttcggcagtgttctccagacgcatgacatcgaccgtgacaattac
actgacatccttctggtcggagctcccatgtatatgggtccagagagggacgaacaaggt
caagtctacgtctacagactcaatgaggacgggctgtttgaacacgagatgacgctgaag
ccggtgaatcagacctgctgtacagctcactcccagagcaactgtaagagcatcagtaag
aacgagccctgcggcgcacgcttcggtaccgccatcgctgccgtccctgacctcaacctg
gacggcttcagtgacatagtgatcggatcacctctggagaatgaccacaggggggcggtg
tatatttaccacggctctcagaaatcaataaaggagaagtatgtacagcgcattgctgct
ggaggagacggagagagcatgaagttcttcggccaatcgattcacggcatcatggatttg
aatgatgacggcatcattgacgtcaccatcggaggaataggaggagccgcgcttttctgg
tctcgggatgtcgcagagcttcttgccgagatgaccttcgaccctagcaagatcaatctg
cagcagacctgtcaggttcaagggaggaccacagtatgtgtgaagaccaaagtgtgcttc
aaatatcgaatcaagtctgacaaagacacaaacacaggaacggtcatcaggtacagtttg
actcttgactcgctgagagcgattgctagaggacggtttaacgaaacggacaacaggagg
ctgcagaagaacgagtccatcgtggacaggctttgcagagagcacaccttctacacgtcg
gcaagtaaccagtcttcttatacacaagagggcaaacttctgtcacgtgatttttaccag
aggttctctgatcaaaggcccgaggccagaaaaatcagcccagcctccattgagacactg
cagcacgtcctgcttcactgcatacttgccctcggagatccagaggaaattgcattagtg
gactgcgggaatgacgacaagtgtgttgctaatctacaccttaaagccactgcaaacatc
tcgagacttctcataaaaagcaaccaggagaagttttatgtcaacatcgacatccacaac
agcagagacaatgcttacaatactaaggttacactgagccacacggaaaatatcaactat
gtgaaagttgagcccaaagataaagactgtgaaacgaatcctaccagaatagtatgtgca
gttggatatccttttcttaaaactgacaaaaaggaaagcttcaaaatccagttcgagccc
aatccctttcatattcgtaaggacattgtgatcaatgttactgcaaccactgatagtgag
gagtcggattcaaacttgagagacaactttgtgagcatcgtcatccctgtgcagcacgaa
gccaacctgagattcagtgcaaacaagtatatgaagcaggaccacatcatatttaaagag
aaggagacgatacccagcgttttcaaccacactagtgtgatcggggatgaggtgaaaatc
agctacacgagcggcgttccagcggatgacgtagacgtagcttga
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integrated database retrieval system
